Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

GABRA5


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
2558 gamma-aminobutyric acid (GABA) A receptor, alpha 5 chr15 +27106865 - 27112772 27112272

Transcription Factor Binding Sites

 
Download all TFBS in the GABRA5 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
CTCF_MA0139.1 JASPAR - 27110058 27110076 5.0E-06 AAGACAGTAGAGGGCACCC 19
SOX21_HMG_DBD_dimeric_13_2 SELEX + 27110098 27110110 7.0E-06 TTAATTTCATTCA 13
SOX21_HMG_DBD_dimeric_13_2 SELEX - 27110098 27110110 7.0E-06 TGAATGAAATTAA 13
ESR2_MA0258.1 JASPAR - 27111775 27111792 6.0E-06 CAGGGTCACATTGGACTC 18
SRY_HMG_DBD_dimeric_13_2 SELEX + 27110098 27110110 2.0E-06 TTAATTTCATTCA 13
PDX1_homeodomain_DBD_dimeric_18_1 SELEX - 27110098 27110115 5.0E-06 TTCATTGAATGAAATTAA 18
IRF7_IRF_DBD_trimeric_17_1 SELEX + 27110007 27110023 6.0E-06 GAAATGAAATTCTTATG 17
Sox1_HMG_DBD_dimeric_13_1 SELEX + 27110098 27110110 9.0E-06 TTAATTTCATTCA 13
Sox17_HMG_DBD_dimeric_15_2 SELEX + 27110097 27110111 9.0E-06 CTTAATTTCATTCAA 15
SOX2_HMG_full_dimeric_15_1 SELEX + 27110097 27110111 2.0E-06 CTTAATTTCATTCAA 15
MAX_bHLH_DBD_dimer-of-dimers_17_1 SELEX + 27109948 27109964 3.0E-06 CACGTGTTCTACTCATG 17
MAX_bHLH_DBD_dimer-of-dimers_17_1 SELEX - 27109948 27109964 5.0E-06 CATGAGTAGAACACGTG 17
CTCF_C2H2_full_monomeric_17_1 SELEX + 27110059 27110075 9.0E-06 GGTGCCCTCTACTGTCT 17
SOX14_HMG_DBD_dimeric_15_1 SELEX + 27110097 27110111 2.0E-06 CTTAATTTCATTCAA 15
SOX18_HMG_full_dimeric_15_3 SELEX + 27110097 27110111 8.0E-06 CTTAATTTCATTCAA 15
Sox3_HMG_DBD_dimeric_17_3 SELEX + 27110096 27110112 6.0E-06 GCTTAATTTCATTCAAT 17
PLAG1_MA0163.1 JASPAR + 27112283 27112296 7.0E-06 GGGGCGCTGGGGGG 14
Sox1_HMG_DBD_dimeric_15_2 SELEX + 27110097 27110111 4.0E-06 CTTAATTTCATTCAA 15
Zfx_MA0146.1 JASPAR - 27112114 27112127 7.0E-06 CCCGGCTCGGCCTG 14
V_CEBP_Q3_M00770 TRANSFAC - 27110093 27110104 5.0E-06 AAATTAAGCAAT 12
V_HMGIY_Q3_M01010 TRANSFAC + 27110008 27110022 1.0E-05 AAATGAAATTCTTAT 15
V_PROP1_01_M01294 TRANSFAC + 27110099 27110109 1.0E-05 TAATTTCATTC 11
V_MEF2_02_M00231 TRANSFAC - 27109981 27110002 2.0E-06 GTCAGAGCCTAAAATAGCTGAA 22
V_CEBP_Q2_M00190 TRANSFAC + 27110091 27110104 0.0E+00 ACATTGCTTAATTT 14
V_HBP1_Q2_M01661 TRANSFAC + 27110107 27110115 3.0E-06 TTCAATGAA 9
V_CEBPB_01_M00109 TRANSFAC - 27110091 27110104 0.0E+00 AAATTAAGCAATGT 14
V_POU3F2_01_M00463 TRANSFAC + 27110094 27110107 7.0E-06 TTGCTTAATTTCAT 14
V_CEBPD_Q6_M00621 TRANSFAC + 27110092 27110103 1.0E-06 CATTGCTTAATT 12
V_CEBPB_02_M00117 TRANSFAC + 27110091 27110104 1.0E-05 ACATTGCTTAATTT 14
V_PAX2_01_M00098 TRANSFAC + 27111804 27111822 9.0E-06 CGTAGTTATGCATTCCTGT 19
V_OCT1_04_M00138 TRANSFAC + 27110114 27110136 1.0E-06 AAGAGAAAATGCTAATGAAACAA 23
V_HBP1_03_M02762 TRANSFAC - 27110099 27110114 2.0E-06 TCATTGAATGAAATTA 16
V_MEF2_Q6_01_M00941 TRANSFAC + 27109984 27109995 6.0E-06 AGCTATTTTAGG 12
V_CTCF_02_M01259 TRANSFAC - 27110060 27110079 8.0E-06 TGGAAGACAGTAGAGGGCAC 20
V_CTCF_01_M01200 TRANSFAC - 27110058 27110077 1.0E-05 GAAGACAGTAGAGGGCACCC 20
V_PTF1BETA_Q6_M00657 TRANSFAC + 27112079 27112092 4.0E-06 GGAGAAACTTCAGC 14
V_CEBPA_01_M00116 TRANSFAC + 27110091 27110104 1.0E-06 ACATTGCTTAATTT 14
V_BBX_03_M02739 TRANSFAC - 27110100 27110114 5.0E-06 TCATTGAATGAAATT 15
V_BBX_03_M02739 TRANSFAC + 27110104 27110118 0.0E+00 TCATTCAATGAAGAG 15
V_OCT1_06_M00162 TRANSFAC + 27110097 27110110 2.0E-06 CTTAATTTCATTCA 14
V_VMAF_01_M00035 TRANSFAC + 27111994 27112012 1.0E-05 GACTGCTGACACTGCCCTC 19
V_SOX1_03_M02802 TRANSFAC + 27110101 27110116 5.0E-06 ATTTCATTCAATGAAG 16
V_SOX15_04_M02903 TRANSFAC + 27110097 27110111 4.0E-06 CTTAATTTCATTCAA 15
V_SOX15_04_M02903 TRANSFAC - 27110097 27110111 0.0E+00 TTGAATGAAATTAAG 15
V_CEBP_Q2_01_M00912 TRANSFAC + 27110093 27110104 1.0E-06 ATTGCTTAATTT 12
V_ESR2_01_M02377 TRANSFAC - 27111775 27111792 6.0E-06 CAGGGTCACATTGGACTC 18
V_CEBPA_Q6_M01866 TRANSFAC - 27110092 27110104 6.0E-06 AAATTAAGCAATG 13
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL