Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TCTEX1D2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 255758 Tctex1 domain containing 2 chr3 - 196044665 - 196050165 196045165 Transcription Factor Binding Sites   Download all TFBS in the TCTEX1D2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HINFP1_C2H2_full_dimeric_19_1 SELEX + 196044800 196044818 1.0E-06 GCGGACCCCGCGCGTCCCC 19 HINFP1_C2H2_full_dimeric_19_1 SELEX - 196044800 196044818 1.0E-06 GGGGACGCGCGGGGTCCGC 19 SOX10_HMG_full_dimeric_15_3 SELEX - 196049995 196050009 9.0E-06 CTGGATTACAGGCAT 15 RARB_nuclearreceptor_full_dimeric_16_1 SELEX + 196041161 196041176 1.0E-06 GAGGGTCAGGAGTTCA 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 196045100 196045115 9.0E-06 TGTTGCCCTGGAGACG 16 Tp53_p53l_DBD_dimeric_18_2 SELEX + 196047114 196047131 1.0E-06 GACAAGCCCAGGCAAGCT 18 Tp53_p53l_DBD_dimeric_18_2 SELEX - 196047114 196047131 1.0E-06 AGCTTGCCTGGGCTTGTC 18 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX + 196044970 196044980 0.0E+00 AGCCTCAGGCA 11 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX - 196044970 196044980 6.0E-06 TGCCTGAGGCT 11 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX + 196045238 196045248 2.0E-06 CGCCTCAGGCA 11 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX - 196045238 196045248 1.0E-05 TGCCTGAGGCG 11 EWSR1-FLI1_MA0149.1 JASPAR + 196046494 196046511 9.0E-06 TGAAAGAATGGAGGCAAG 18 GCM1_GCM_full_dimeric_16_1 SELEX - 196044526 196044541 6.0E-06 ACACGGGTGCCAGGAT 16 RUNX3_RUNX_DBD_dimeric_16_1 SELEX - 196045065 196045080 4.0E-06 CGACCGCAACCCGCTA 16 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX + 196041162 196041179 8.0E-06 AGGGTCAGGAGTTCAAGA 18 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX + 196044970 196044980 0.0E+00 AGCCTCAGGCA 11 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 196044970 196044980 8.0E-06 TGCCTGAGGCT 11 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX + 196045238 196045248 1.0E-06 CGCCTCAGGCA 11 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 196045286 196045296 8.0E-06 AGCCTCAGGCC 11 RUNX2_RUNX_DBD_dimeric_16_1 SELEX - 196045065 196045080 5.0E-06 CGACCGCAACCCGCTA 16 OTX2_homeodomain_DBD_monomeric_8_1 SELEX + 196044427 196044434 7.0E-06 TTAATCCT 8 MAFK_bZIP_DBD_dimeric_21_1 SELEX + 196046574 196046594 9.0E-06 GTCCTGCTGACCCATCAGAAT 21 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX + 196041162 196041177 1.0E-06 AGGGTCAGGAGTTCAA 16 ZSCAN4_C2H2_full_monomeric_15_1 SELEX - 196043887 196043901 0.0E+00 CACACACACTGAAAA 15 PITX1_homeodomain_full_monomeric_9_1 SELEX + 196044426 196044434 9.0E-06 CTTAATCCT 9 TFAP2C_TFAP_full_dimeric_11_1 SELEX + 196044970 196044980 0.0E+00 AGCCTCAGGCA 11 TFAP2C_TFAP_full_dimeric_11_1 SELEX - 196044970 196044980 4.0E-06 TGCCTGAGGCT 11 TFAP2C_TFAP_full_dimeric_11_1 SELEX + 196045238 196045248 4.0E-06 CGCCTCAGGCA 11 MAFG_bZIP_full_dimeric_21_1 SELEX - 196046574 196046594 9.0E-06 ATTCTGATGGGTCAGCAGGAC 21 PPARG_MA0066.1 JASPAR - 196046569 196046588 6.0E-06 ATGGGTCAGCAGGACCCCAA 20 TP53_MA0106.1 JASPAR + 196047111 196047130 5.0E-06 TGAGACAAGCCCAGGCAAGC 20 TP53_MA0106.1 JASPAR - 196047115 196047134 5.0E-06 GGAAGCTTGCCTGGGCTTGT 20 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX + 196044610 196044628 6.0E-06 ATCTCCTTACTCAGGACGC 19 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX - 196044610 196044628 2.0E-06 GCGTCCTGAGTAAGGAGAT 19 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX + 196041162 196041176 1.0E-06 AGGGTCAGGAGTTCA 15 RARA_nuclearreceptor_full_dimeric_15_1 SELEX + 196041162 196041176 2.0E-06 AGGGTCAGGAGTTCA 15 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 196044970 196044980 1.0E-06 AGCCTCAGGCA 11 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 196044970 196044980 6.0E-06 TGCCTGAGGCT 11 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 196045238 196045248 2.0E-06 CGCCTCAGGCA 11 RREB1_MA0073.1 JASPAR - 196043765 196043784 0.0E+00 ACACAACACACACACACACA 20 RREB1_MA0073.1 JASPAR - 196043767 196043786 0.0E+00 CCACACAACACACACACACA 20 RREB1_MA0073.1 JASPAR - 196043770 196043789 1.0E-06 ACACCACACAACACACACAC 20 RREB1_MA0073.1 JASPAR - 196043772 196043791 3.0E-06 ACACACCACACAACACACAC 20 RREB1_MA0073.1 JASPAR - 196043774 196043793 1.0E-06 ACACACACCACACAACACAC 20 RREB1_MA0073.1 JASPAR - 196043785 196043804 0.0E+00 ACACAACACACACACACACC 20 RREB1_MA0073.1 JASPAR - 196043787 196043806 0.0E+00 CCACACAACACACACACACA 20 RREB1_MA0073.1 JASPAR - 196043790 196043809 1.0E-06 ACACCACACAACACACACAC 20 RREB1_MA0073.1 JASPAR - 196043792 196043811 3.0E-06 ACACACCACACAACACACAC 20 RREB1_MA0073.1 JASPAR - 196043794 196043813 1.0E-06 ACACACACCACACAACACAC 20 RREB1_MA0073.1 JASPAR - 196043902 196043921 0.0E+00 ACACAACACACACACACACA 20 RREB1_MA0073.1 JASPAR - 196043904 196043923 0.0E+00 CCACACAACACACACACACA 20 RREB1_MA0073.1 JASPAR - 196043907 196043926 1.0E-06 ACACCACACAACACACACAC 20 RREB1_MA0073.1 JASPAR - 196043909 196043928 3.0E-06 ACACACCACACAACACACAC 20 RREB1_MA0073.1 JASPAR - 196043911 196043930 1.0E-06 ACACACACCACACAACACAC 20 RREB1_MA0073.1 JASPAR - 196043918 196043937 1.0E-06 ACACCACACACACACCACAC 20 RREB1_MA0073.1 JASPAR - 196043920 196043939 1.0E-06 ACACACCACACACACACCAC 20 RREB1_MA0073.1 JASPAR - 196043922 196043941 0.0E+00 ACACACACCACACACACACC 20 Zfx_MA0146.1 JASPAR + 196045350 196045363 5.0E-06 GGGGCTCAGGCCTG 14 Zfx_MA0146.1 JASPAR - 196045381 196045394 5.0E-06 CCCGCCTCGGCCTC 14 V_MEQ_01_M02049 TRANSFAC - 196043772 196043780 7.0E-06 AACACACAC 9 V_MEQ_01_M02049 TRANSFAC - 196043792 196043800 7.0E-06 AACACACAC 9 V_MEQ_01_M02049 TRANSFAC - 196043909 196043917 7.0E-06 AACACACAC 9 V_RORA1_01_M00156 TRANSFAC - 196047077 196047089 8.0E-06 GTTTCAGGGTCAT 13 V_MTF1_Q4_M00650 TRANSFAC - 196044533 196044546 8.0E-06 TGTGCACACGGGTG 14 V_ETS_B_M00340 TRANSFAC - 196044584 196044597 6.0E-06 GGCAGGAAGCCACT 14 V_LMAF_Q2_M01139 TRANSFAC - 196046577 196046585 6.0E-06 GGTCAGCAG 9 V_IK_Q5_M01169 TRANSFAC + 196045376 196045385 3.0E-06 TTTGGGAGGC 10 V_SPDEF_04_M02915 TRANSFAC - 196047150 196047165 4.0E-06 GAGCACATCCTATTCC 16 V_P53_DECAMER_Q2_M00761 TRANSFAC + 196047113 196047122 4.0E-06 AGACAAGCCC 10 V_LYF1_01_M00141 TRANSFAC + 196045376 196045384 9.0E-06 TTTGGGAGG 9 V_LYF1_01_M00141 TRANSFAC + 196050013 196050021 3.0E-06 TTTGGGAGA 9 V_TCFAP2E_04_M02926 TRANSFAC - 196043882 196043895 2.0E-06 CACTGAAAAAAATG 14 V_DLX5_01_M01388 TRANSFAC - 196045323 196045338 7.0E-06 GCCGCAATTACTTCTG 16 V_PAX_Q6_M00808 TRANSFAC + 196047083 196047093 7.0E-06 CTGAAACTAAC 11 V_RPC155_01_M01798 TRANSFAC + 196041166 196041181 0.0E+00 TCAGGAGTTCAAGACA 16 V_RPC155_01_M01798 TRANSFAC + 196045411 196045426 6.0E-06 GGAAGAGTTCAAGACC 16 V_BACH1_01_M00495 TRANSFAC - 196049985 196049999 6.0E-06 GGCATGAGTCACTGT 15 V_SREBP1_01_M00220 TRANSFAC + 196045397 196045407 8.0E-06 GATCACCTGAG 11 V_PAX9_B_M00329 TRANSFAC - 196047195 196047218 9.0E-06 GAGACACAAGGAGGCACAGCCTCT 24 V_ZBED6_01_M01598 TRANSFAC - 196044844 196044855 8.0E-06 GGAGCTCGCCTG 12 V_P53_03_M01651 TRANSFAC + 196047113 196047132 0.0E+00 AGACAAGCCCAGGCAAGCTT 20 V_P53_03_M01651 TRANSFAC - 196047113 196047132 0.0E+00 AAGCTTGCCTGGGCTTGTCT 20 V_PXRRXR_02_M01153 TRANSFAC + 196045414 196045421 1.0E-05 AGAGTTCA 8 V_AP2BETA_Q3_M01858 TRANSFAC - 196044857 196044872 8.0E-06 GCGCTGGTCTGAGGGG 16 V_TTF1_Q6_M00794 TRANSFAC - 196041154 196041165 2.0E-06 CCCTCAAGAGAT 12 V_NCX_02_M01420 TRANSFAC - 196046677 196046693 8.0E-06 TAAAGAATTTATATCTA 17 V_BCL6B_04_M02844 TRANSFAC + 196044850 196044865 5.0E-06 AGCTCCGCCCCTCAGA 16 V_TBP_01_M00471 TRANSFAC + 196046681 196046688 8.0E-06 TATAAATT 8 V_FAC1_01_M00456 TRANSFAC - 196043773 196043786 2.0E-06 CCACACAACACACA 14 V_FAC1_01_M00456 TRANSFAC - 196043793 196043806 2.0E-06 CCACACAACACACA 14 V_FAC1_01_M00456 TRANSFAC - 196043910 196043923 2.0E-06 CCACACAACACACA 14 V_ZFP206_01_M01742 TRANSFAC - 196045176 196045186 1.0E-06 TGCGCAGGCGC 11 V_BDP1_01_M01796 TRANSFAC - 196045415 196045426 2.0E-06 GGTCTTGAACTC 12 V_P53_05_M01655 TRANSFAC + 196047113 196047132 2.0E-06 AGACAAGCCCAGGCAAGCTT 20 V_P53_05_M01655 TRANSFAC - 196047113 196047132 0.0E+00 AAGCTTGCCTGGGCTTGTCT 20 V_P53_04_M01652 TRANSFAC + 196047113 196047132 0.0E+00 AGACAAGCCCAGGCAAGCTT 20 V_P53_04_M01652 TRANSFAC - 196047113 196047132 0.0E+00 AAGCTTGCCTGGGCTTGTCT 20 V_P53_01_M00034 TRANSFAC + 196047113 196047132 3.0E-06 AGACAAGCCCAGGCAAGCTT 20 V_P53_01_M00034 TRANSFAC - 196047113 196047132 3.0E-06 AAGCTTGCCTGGGCTTGTCT 20 V_P63_01_M01656 TRANSFAC + 196047113 196047132 5.0E-06 AGACAAGCCCAGGCAAGCTT 20 V_P63_01_M01656 TRANSFAC - 196047113 196047132 2.0E-06 AAGCTTGCCTGGGCTTGTCT 20 V_EWSR1FLI1_01_M02252 TRANSFAC + 196046494 196046511 9.0E-06 TGAAAGAATGGAGGCAAG 18 V_PPARG_02_M00515 TRANSFAC - 196042909 196042931 6.0E-06 CACAGAGTCAGTATTACCCATTT 23 V_AP2ALPHA_02_M01045 TRANSFAC - 196045236 196045250 9.0E-06 ACTGCCTGAGGCGGG 15 V_AP2ALPHA_03_M01047 TRANSFAC + 196045236 196045250 2.0E-06 CCCGCCTCAGGCAGT 15 V_AP2ALPHA_03_M01047 TRANSFAC - 196045236 196045250 2.0E-06 ACTGCCTGAGGCGGG 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.