Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

NPNT


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
255743 nephronectin chr4 +106811596 - 106817096 106816596

Transcription Factor Binding Sites

 
Download all TFBS in the NPNT promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
THRB_nuclearreceptor_DBD_dimeric_20_1 SELEX + 106818282 106818301 9.0E-06 GTGACTCTAAACAAGGAAAC 20
SOX4_HMG_DBD_dimeric_16_1 SELEX - 106812934 106812949 9.0E-06 TAACAGATTCATGGTT 16
IRF7_IRF_DBD_dimeric_14_1 SELEX - 106817869 106817882 8.0E-06 AAGAAAGCGAATCA 14
RFX4_RFX_DBD_dimeric_16_1 SELEX - 106812922 106812937 4.0E-06 GGTTTCTGTGGCAACT 16
ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 106816087 106816098 1.0E-06 GCTTTTCCCGCA 12
TBX20_TBX_DBD_dimeric_19_1 SELEX - 106816915 106816933 5.0E-06 GAGTGTGAAATTAGCGCGG 19
Pax4_MA0068.1 JASPAR - 106818697 106818726 2.0E-06 AAATAAAACAGATTCCTCAAAGACCCACAC 30
LEF1_HMG_DBD_monomeric_15_1 SELEX - 106817834 106817848 5.0E-06 CAAGATTAAAGGTAA 15
CUX1_CUT_DBD_dimeric_18_1 SELEX + 106817855 106817872 1.0E-06 ATCAATTCCACAATTGAT 18
CUX1_CUT_DBD_dimeric_18_1 SELEX - 106817855 106817872 1.0E-06 ATCAATTGTGGAATTGAT 18
Rfx3_RFX_DBD_dimeric_16_1 SELEX + 106812922 106812937 8.0E-06 AGTTGCCACAGAAACC 16
Rfx3_RFX_DBD_dimeric_16_1 SELEX - 106812922 106812937 5.0E-06 GGTTTCTGTGGCAACT 16
FIGLA_bHLH_DBD_dimeric_10_1 SELEX + 106816246 106816255 1.0E-06 ACCACCTGTT 10
RELA_MA0107.1 JASPAR - 106817237 106817246 5.0E-06 GGGAGTTTCC 10
Tcf7_HMG_DBD_monomeric_12_1 SELEX - 106817837 106817848 6.0E-06 CAAGATTAAAGG 12
SOX7_HMG_full_dimeric_17_1 SELEX - 106812933 106812949 7.0E-06 TAACAGATTCATGGTTT 17
RFX2_RFX_DBD_dimeric_16_1 SELEX + 106812922 106812937 7.0E-06 AGTTGCCACAGAAACC 16
RFX2_RFX_DBD_dimeric_16_1 SELEX - 106812922 106812937 6.0E-06 GGTTTCTGTGGCAACT 16
RFX5_RFX_DBD_dimeric_16_3 SELEX + 106812922 106812937 3.0E-06 AGTTGCCACAGAAACC 16
RFX5_RFX_DBD_dimeric_16_3 SELEX - 106812922 106812937 5.0E-06 GGTTTCTGTGGCAACT 16
CUX2_CUT_DBD_dimeric_18_1 SELEX + 106817855 106817872 0.0E+00 ATCAATTCCACAATTGAT 18
CUX2_CUT_DBD_dimeric_18_1 SELEX - 106817855 106817872 0.0E+00 ATCAATTGTGGAATTGAT 18
Sox11_HMG_DBD_dimeric_15_1 SELEX - 106812934 106812948 8.0E-06 AACAGATTCATGGTT 15
CPEB1_RRM_full_monomeric_8_1 SELEX + 106816061 106816068 4.0E-06 AATAAAAA 8
RUNX1_MA0002.2 JASPAR + 106816138 106816148 2.0E-06 TGCTGTGGTTT 11
V_DMRT4_01_M01149 TRANSFAC + 106818302 106818314 9.0E-06 AATTTAGCAAATA 13
V_FOXP1_01_M00987 TRANSFAC + 106816038 106816057 2.0E-06 ATATTTCTTTTGGTTAGTTA 20
V_FOXP1_01_M00987 TRANSFAC + 106818477 106818496 6.0E-06 TTATTTAGACTTTTTTCTAG 20
V_FOXP1_01_M00987 TRANSFAC + 106818490 106818509 1.0E-05 TTTCTAGTACTTTTTTGTTT 20
V_CEBPG_Q6_M00622 TRANSFAC + 106818791 106818803 8.0E-06 TCTACTTAAGAAA 13
V_NFKAPPAB65_01_M00052 TRANSFAC - 106817237 106817246 7.0E-06 GGGAGTTTCC 10
RXR_RAR_DR5_MA0159.1 JASPAR + 106816868 106816884 8.0E-06 AGTTCGACGGGAGGTGA 17
V_DBX1_01_M01483 TRANSFAC + 106816055 106816071 6.0E-06 TTACAAAATAAAAAATA 17
V_GEN_INI_B_M00315 TRANSFAC - 106817423 106817430 1.0E-05 CCTCATTT 8
V_NFKB_Q6_01_M00774 TRANSFAC + 106817232 106817247 7.0E-06 ACCCGGGAAACTCCCG 16
V_MYOD_Q6_M00184 TRANSFAC + 106816246 106816255 7.0E-06 ACCACCTGTT 10
V_CEBP_Q3_M00770 TRANSFAC + 106818301 106818312 8.0E-06 CAATTTAGCAAA 12
V_HMGIY_Q3_M01010 TRANSFAC - 106816063 106816077 1.0E-06 AAGGCATATTTTTTA 15
V_MTF1_Q4_M00650 TRANSFAC - 106817693 106817706 3.0E-06 TCTGCACCCGGGAC 14
V_EVI1_04_M00081 TRANSFAC - 106818478 106818492 6.0E-06 AAAAAAGTCTAAATA 15
V_FOXD3_01_M00130 TRANSFAC - 106816060 106816071 9.0E-06 TATTTTTTATTT 12
V_BCL6_01_M01183 TRANSFAC + 106818489 106818504 9.0E-06 TTTTCTAGTACTTTTT 16
V_BCL6_01_M01183 TRANSFAC + 106818490 106818505 9.0E-06 TTTCTAGTACTTTTTT 16
V_DEAF1_02_M01002 TRANSFAC - 106817230 106817254 4.0E-06 TCAGGCGCGGGAGTTTCCCGGGTAA 25
V_MMEF2_Q6_M00405 TRANSFAC - 106818473 106818488 1.0E-06 AAGTCTAAATAAAACC 16
V_HOXA13_02_M01297 TRANSFAC + 106816060 106816068 4.0E-06 AAATAAAAA 9
V_HOXA13_02_M01297 TRANSFAC - 106818718 106818726 1.0E-06 AAATAAAAC 9
V_SATB1_Q3_M01723 TRANSFAC + 106817806 106817821 5.0E-06 AGTCCTAAAGAAAGAT 16
V_EOMES_03_M02747 TRANSFAC - 106816921 106816937 8.0E-06 CAGTGAGTGTGAAATTA 17
V_ISL2_01_M01328 TRANSFAC + 106815841 106815856 3.0E-06 AATGATTACTTAAAAT 16
V_CEBP_01_M00159 TRANSFAC - 106818302 106818314 0.0E+00 TATTTGCTAAATT 13
V_HNF3_Q6_01_M01012 TRANSFAC - 106816056 106816073 7.0E-06 CATATTTTTTATTTTGTA 18
V_HNF3_Q6_01_M01012 TRANSFAC - 106818302 106818319 2.0E-06 CACATTATTTGCTAAATT 18
V_TCFAP2E_04_M02926 TRANSFAC + 106816056 106816069 4.0E-06 TACAAAATAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 106818485 106818498 1.0E-06 TACTAGAAAAAAGT 14
V_TCFAP2E_04_M02926 TRANSFAC - 106818719 106818732 8.0E-06 AGCTTGAAATAAAA 14
V_ELF4_04_M02850 TRANSFAC + 106816054 106816070 0.0E+00 GTTACAAAATAAAAAAT 17
V_ELF4_04_M02850 TRANSFAC + 106816055 106816071 3.0E-06 TTACAAAATAAAAAATA 17
V_ELF4_04_M02850 TRANSFAC + 106816056 106816072 5.0E-06 TACAAAATAAAAAATAT 17
V_ELF4_04_M02850 TRANSFAC - 106818471 106818487 1.0E-05 AGTCTAAATAAAACCAA 17
V_GEN_INI3_B_M00314 TRANSFAC - 106817423 106817430 1.0E-05 CCTCATTT 8
V_FOXA2_02_M02853 TRANSFAC + 106816058 106816072 5.0E-06 CAAAATAAAAAATAT 15
V_ZFP105_03_M02827 TRANSFAC + 106816057 106816071 4.0E-06 ACAAAATAAAAAATA 15
V_ZFP105_03_M02827 TRANSFAC + 106816058 106816072 3.0E-06 CAAAATAAAAAATAT 15
V_RUNX1_01_M02257 TRANSFAC + 106816138 106816148 2.0E-06 TGCTGTGGTTT 11
V_ARID5A_03_M02736 TRANSFAC + 106816035 106816048 9.0E-06 CAAATATTTCTTTT 14
V_HNF1_Q6_M00790 TRANSFAC + 106818637 106818654 9.0E-06 TACTTAATACTTTTCAGT 18
V_NKX31_02_M02782 TRANSFAC + 106818787 106818803 5.0E-06 TATTTCTACTTAAGAAA 17
V_POLY_C_M00212 TRANSFAC + 106816180 106816197 7.0E-06 CCATAAACCTCTCTGCTC 18
V_E2F1_Q6_01_M00940 TRANSFAC - 106817215 106817224 8.0E-06 GTTTCGCGCG 10
V_ZBED6_01_M01598 TRANSFAC - 106817516 106817527 2.0E-06 CAGGCTCGCCCG 12
V_AMEF2_Q6_M00403 TRANSFAC - 106818471 106818488 0.0E+00 AAGTCTAAATAAAACCAA 18
V_MAZ_Q6_01_M02023 TRANSFAC - 106816294 106816307 2.0E-06 GGAGGAGGAAAGGA 14
V_HNF1_Q6_01_M01011 TRANSFAC - 106818635 106818655 4.0E-06 AACTGAAAAGTATTAAGTAAG 21
V_PIT1_01_M01465 TRANSFAC - 106818633 106818649 9.0E-06 AAAGTATTAAGTAAGAC 17
V_TAL1BETAE47_01_M00065 TRANSFAC - 106816243 106816258 6.0E-06 CCGAACAGGTGGTGAC 16
V_MEF2_04_M00233 TRANSFAC + 106815842 106815863 3.0E-06 ATGATTACTTAAAATGGTTTCT 22
V_NCX_02_M01420 TRANSFAC + 106816055 106816071 9.0E-06 TTACAAAATAAAAAATA 17
V_ARID3A_04_M02735 TRANSFAC + 106818473 106818489 6.0E-06 GGTTTTATTTAGACTTT 17
V_BLIMP1_Q6_M01066 TRANSFAC - 106816920 106816935 8.0E-06 GTGAGTGTGAAATTAG 16
V_SP4_Q5_M01273 TRANSFAC + 106816549 106816559 7.0E-06 GCCCCTCCCCG 11
V_MYOD_01_M00001 TRANSFAC - 106816245 106816256 0.0E+00 GAACAGGTGGTG 12
V_MTF1_06_M02882 TRANSFAC + 106816060 106816073 0.0E+00 AAATAAAAAATATG 14
V_FAC1_01_M00456 TRANSFAC - 106816039 106816052 3.0E-06 AACCAAAAGAAATA 14
V_CEBPA_01_M00116 TRANSFAC + 106815843 106815856 6.0E-06 TGATTACTTAAAAT 14
V_MYOD_Q6_01_M00929 TRANSFAC - 106816242 106816259 9.0E-06 CCCGAACAGGTGGTGACT 18
V_TCFE2A_03_M02823 TRANSFAC - 106817820 106817836 6.0E-06 TAAAACAGGTGCGGCAT 17
V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 106817435 106817443 8.0E-06 GAGGGTGGG 9
V_FOXL1_02_M02857 TRANSFAC + 106816054 106816069 3.0E-06 GTTACAAAATAAAAAA 16
V_FOXL1_02_M02857 TRANSFAC - 106818473 106818488 2.0E-06 AAGTCTAAATAAAACC 16
V_TAL1ALPHAE47_01_M00066 TRANSFAC - 106816243 106816258 7.0E-06 CCGAACAGGTGGTGAC 16
V_MYOGNF1_01_M00056 TRANSFAC + 106815911 106815939 2.0E-06 AGCCCTTCCTCTCTGGCAGGCACTCATCC 29
V_MYOGNF1_01_M00056 TRANSFAC - 106816045 106816073 4.0E-06 CATATTTTTTATTTTGTAACTAACCAAAA 29
V_GEN_INI2_B_M00313 TRANSFAC - 106817423 106817430 1.0E-05 CCTCATTT 8
V_DMRT7_01_M01151 TRANSFAC - 106818290 106818303 3.0E-06 TTGTTTCCTTGTTT 14
V_ZFP206_01_M01742 TRANSFAC - 106816519 106816529 7.0E-06 TGCGCGTGCGC 11
V_FOX_Q2_M00809 TRANSFAC - 106818305 106818317 4.0E-06 CATTATTTGCTAA 13
V_STAT6_02_M00500 TRANSFAC - 106812913 106812920 1.0E-05 GATTTCCT 8
V_SIX4_01_M01374 TRANSFAC + 106814855 106814871 5.0E-06 ATGGATGACACCAAGCT 17
V_SOX21_04_M02907 TRANSFAC - 106818293 106818309 9.0E-06 GCTAAATTGTTTCCTTG 17
V_RXR_RAR_01_M02272 TRANSFAC + 106816868 106816884 8.0E-06 AGTTCGACGGGAGGTGA 17
V_SOX8_03_M02808 TRANSFAC - 106816056 106816072 9.0E-06 ATATTTTTTATTTTGTA 17
V_SRF_06_M02916 TRANSFAC + 106816054 106816070 1.0E-06 GTTACAAAATAAAAAAT 17
V_SRF_06_M02916 TRANSFAC + 106816055 106816071 6.0E-06 TTACAAAATAAAAAATA 17
V_SRF_06_M02916 TRANSFAC - 106818714 106818730 4.0E-06 CTTGAAATAAAACAGAT 17
V_ZIC3_04_M02837 TRANSFAC - 106817285 106817299 8.0E-06 TCCCCCCGGGGGCCT 15
V_ZIC1_04_M02835 TRANSFAC - 106817287 106817300 6.0E-06 CTCCCCCCGGGGGC 14
V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 106816141 106816148 1.0E-05 TGTGGTTT 8
V_SATB1_01_M01232 TRANSFAC - 106818487 106818498 1.0E-05 TACTAGAAAAAA 12
V_RFX3_05_M02892 TRANSFAC + 106816043 106816065 6.0E-06 TCTTTTGGTTAGTTACAAAATAA 23
V_HNF3B_Q6_M02014 TRANSFAC - 106818307 106818315 1.0E-05 TTATTTGCT 9
V_HOXA10_01_M01464 TRANSFAC + 106816056 106816071 5.0E-06 TACAAAATAAAAAATA 16
V_ZIC2_04_M02836 TRANSFAC - 106817285 106817299 5.0E-06 TCCCCCCGGGGGCCT 15
V_DMRT1_01_M01146 TRANSFAC + 106818295 106818309 3.0E-06 AGGAAACAATTTAGC 15
V_DMRT1_01_M01146 TRANSFAC - 106818297 106818311 4.0E-06 TTGCTAAATTGTTTC 15
V_GLIS2_04_M02863 TRANSFAC - 106818634 106818647 8.0E-06 AGTATTAAGTAAGA 14
V_RFX1_02_M00281 TRANSFAC + 106812921 106812938 1.0E-06 TAGTTGCCACAGAAACCA 18
V_CEBPA_Q6_M01866 TRANSFAC + 106818301 106818313 7.0E-06 CAATTTAGCAAAT 13
V_AP2_Q3_M00800 TRANSFAC - 106816485 106816500 4.0E-06 AGCCCCGGGCGAAGGG 16
V_NANOG_02_M01247 TRANSFAC - 106816000 106816019 6.0E-06 TTTGAAGAAGAAATGAGCAG 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL