Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

GABRA1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
2554 gamma-aminobutyric acid (GABA) A receptor, alpha 1 chr5 +161269196 - 161278202 161277702

Transcription Factor Binding Sites

 
Download all TFBS in the GABRA1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
POU3F2_POU_DBD_monomeric_13_1 SELEX - 161276968 161276980 7.0E-06 TTTGCATGAATAA 13
Lhx8_homeodomain_DBD_dimeric_12_1 SELEX + 161276933 161276944 9.0E-06 TGATTGCACTTT 12
Lhx8_homeodomain_DBD_dimeric_12_1 SELEX - 161276933 161276944 7.0E-06 AAAGTGCAATCA 12
TEAD1_TEA_full_monomeric_10_1 SELEX + 161276890 161276899 9.0E-06 AACATTCCAC 10
Foxd3_MA0041.1 JASPAR - 161276911 161276922 6.0E-06 GATTGTTGAATT 12
TEAD3_TEA_DBD_monomeric_8_1 SELEX + 161276891 161276898 1.0E-05 ACATTCCA 8
TEAD4_TEA_DBD_monomeric_10_1 SELEX + 161276890 161276899 8.0E-06 AACATTCCAC 10
V_FOXD3_01_M00130 TRANSFAC - 161276911 161276922 9.0E-06 GATTGTTGAATT 12
V_OCT_C_M00210 TRANSFAC - 161276972 161276984 8.0E-06 TTGCTTTGCATGA 13
V_TAL1_Q6_M00993 TRANSFAC + 161276997 161277006 3.0E-06 TCCATCTGTT 10
V_TBX18_01_M01262 TRANSFAC + 161275226 161275244 5.0E-06 GGGTGTGAAATCTTCAGCA 19
V_SOX8_04_M02912 TRANSFAC + 161276968 161276981 5.0E-06 TTATTCATGCAAAG 14
V_DOBOX4_01_M01359 TRANSFAC + 161276955 161276971 9.0E-06 TAAAAAGATCCCTTTAT 17
V_LEF1_03_M02878 TRANSFAC - 161276925 161276940 1.0E-05 TGCAATCAATCACCAT 16
V_OCT1_04_M00138 TRANSFAC + 161276966 161276988 1.0E-05 CTTTATTCATGCAAAGCAAAGCA 23
V_PTF1BETA_Q6_M00657 TRANSFAC + 161273879 161273892 4.0E-06 GAGAAAATGACCAG 14
V_AP3_Q6_M00690 TRANSFAC + 161276907 161276914 5.0E-06 TCTAAATT 8
V_TEF1_Q6_03_M01817 TRANSFAC - 161276891 161276899 6.0E-06 GTGGAATGT 9
V_TCF7L2_04_M02922 TRANSFAC - 161276925 161276940 7.0E-06 TGCAATCAATCACCAT 16
V_PBX_Q3_M00998 TRANSFAC + 161276930 161276941 2.0E-06 GATTGATTGCAC 12
V_HSF2_02_M01244 TRANSFAC - 161276884 161276896 6.0E-06 GAATGTTGGAGAA 13
V_SOX18_04_M02905 TRANSFAC + 161276905 161276920 9.0E-06 AGTCTAAATTCAACAA 16
V_PBX1_Q3_M02028 TRANSFAC - 161276928 161276936 8.0E-06 ATCAATCAC 9
V_DMRT1_01_M01146 TRANSFAC + 161273923 161273937 2.0E-06 CAGAAACATTGTATG 15
V_OCT4_01_M01125 TRANSFAC + 161276967 161276981 6.0E-06 TTTATTCATGCAAAG 15
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL