Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

MORN5 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 254956 MORN repeat containing 5 chr9 + 124917189 - 124922689 124922189 Transcription Factor Binding Sites   Download all TFBS in the MORN5 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX - 124922008 124922026 1.0E-05 AAAGGGGAGTTCAAGGAGA 19 RFX4_RFX_DBD_dimeric_16_1 SELEX - 124922183 124922198 5.0E-06 CATCACTATGACAACC 16 Sox1_HMG_DBD_dimeric_13_1 SELEX + 124918467 124918479 9.0E-06 TCAAATTCATTCA 13 Pax4_MA0068.1 JASPAR + 124920569 124920598 7.0E-06 TAAAACCTTCCACTCTTCCCACCACCTCCC 30 ZNF238_C2H2_full_monomeric_13_1 SELEX - 124922224 124922236 1.0E-05 CTTCCAGCTGTTA 13 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 124922183 124922198 3.0E-06 GGTTGTCATAGTGATG 16 RFX2_RFX_DBD_dimeric_16_1 SELEX + 124922183 124922198 8.0E-06 GGTTGTCATAGTGATG 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 124922183 124922198 9.0E-06 CATCACTATGACAACC 16 Myf_MA0055.1 JASPAR - 124920688 124920699 2.0E-06 AAGCAGCAGGTG 12 ETS1_ETS_full_dimeric_18_1 SELEX - 124922052 124922069 9.0E-06 GCCGGATGCGCATGCGCA 18 NRF1_NRF_full_dimeric_12_1 SELEX + 124922052 124922063 0.0E+00 TGCGCATGCGCA 12 NRF1_NRF_full_dimeric_12_1 SELEX - 124922052 124922063 0.0E+00 TGCGCATGCGCA 12 V_FOXP1_01_M00987 TRANSFAC - 124918413 124918432 1.0E-06 TTGTTTCTGTTGGAATTCAT 20 V_FOXP3_Q4_M00992 TRANSFAC - 124920561 124920577 8.0E-06 AAGGTTTTAAGGCAGAG 17 V_HNF4ALPHA_Q6_M00638 TRANSFAC + 124922125 124922137 7.0E-06 AAGAACTTTTCAG 13 V_TAL1_Q6_M00993 TRANSFAC - 124922225 124922234 7.0E-06 TCCAGCTGTT 10 V_MYF_01_M01302 TRANSFAC - 124920688 124920699 2.0E-06 AAGCAGCAGGTG 12 V_FKLF_Q5_M01837 TRANSFAC - 124922169 124922178 5.0E-06 GGGGTGGGCG 10 V_POLY_C_M00212 TRANSFAC + 124920566 124920583 5.0E-06 CCTTAAAACCTTCCACTC 18 V_PAX9_B_M00329 TRANSFAC + 124921718 124921741 1.0E-06 GTGGGGTAGAGAGGGGAGGCGACT 24 V_MRF2_01_M00454 TRANSFAC + 124922113 124922126 1.0E-05 GTGCGCAATACCAA 14 V_STAT5A_02_M00460 TRANSFAC + 124922327 124922350 9.0E-06 TACCTTGAATAGCTGTGACTGGAA 24 V_ASCL2_03_M02737 TRANSFAC + 124920683 124920699 0.0E+00 CTCAGCACCTGCTGCTT 17 V_HBP1_03_M02762 TRANSFAC - 124918468 124918483 2.0E-06 GATCTGAATGAATTTG 16 V_MUSCLE_INI_B_M00321 TRANSFAC + 124922063 124922083 5.0E-06 ATCCGGCAACACGCAGGCGTA 21 V_LMO2COM_01_M00277 TRANSFAC - 124920685 124920696 9.0E-06 CAGCAGGTGCTG 12 V_AP1_Q2_01_M00924 TRANSFAC - 124918270 124918281 3.0E-06 TGACTCACTGTG 12 V_MYOD_Q6_01_M00929 TRANSFAC - 124920682 124920699 7.0E-06 AAGCAGCAGGTGCTGAGC 18 V_AIRE_01_M00999 TRANSFAC - 124918447 124918472 8.0E-06 ATTTGAGACGGTATTCATGGTAAACA 26 V_ZFP206_01_M01742 TRANSFAC - 124922047 124922057 1.0E-06 TGCGCAGGCGC 11 V_ZFP206_01_M01742 TRANSFAC + 124922052 124922062 0.0E+00 TGCGCATGCGC 11 V_ZFP206_01_M01742 TRANSFAC - 124922053 124922063 0.0E+00 TGCGCATGCGC 11 V_ASCL2_04_M02841 TRANSFAC - 124921712 124921727 1.0E-05 TCTACCCCACCCTGTC 16 V_NRF1_Q6_M00652 TRANSFAC - 124922052 124922061 2.0E-06 CGCATGCGCA 10 V_NRF1_Q6_M00652 TRANSFAC + 124922054 124922063 2.0E-06 CGCATGCGCA 10 V_ZABC1_01_M01306 TRANSFAC + 124918417 124918424 1.0E-05 ATTCCAAC 8 V_EKLF_Q5_M01874 TRANSFAC - 124921714 124921723 9.0E-06 CCCCACCCTG 10 V_PIT1_Q6_M00802 TRANSFAC + 124918470 124918487 5.0E-06 AATTCATTCAGATCTCTT 18 V_ER_Q6_M00191 TRANSFAC - 124920714 124920732 1.0E-06 ACAGTTTGATGTGACCCTA 19

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.