Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

LCE5A


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
254910 late cornified envelope 5A chr1 +152478319 - 152483819 152483319

Transcription Factor Binding Sites

 
Download all TFBS in the LCE5A promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 152479746 152479763 5.0E-06 CCTGCCAACATTGACACT 18
FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 152479746 152479763 8.0E-06 AGTGTCAATGTTGGCAGG 18
Sox17_MA0078.1 JASPAR - 152479737 152479745 9.0E-06 TACATTGTC 9
Mafb_bZIP_DBD_monomeric_12_1 SELEX + 152479700 152479711 8.0E-06 ATTATGATGACT 12
MEF2A_MADS_DBD_dimeric_12_1 SELEX + 152486538 152486549 5.0E-06 GATAAAAATAGG 12
MEOX2_homeodomain_DBD_dimeric_14_1 SELEX - 152479697 152479710 4.0E-06 GTCATCATAATCTG 14
MEF2B_MADS_full_dimeric_12_1 SELEX + 152486538 152486549 1.0E-05 GATAAAAATAGG 12
RFX2_RFX_DBD_dimeric_15_1 SELEX + 152479662 152479676 4.0E-06 GGTTGTTATGCAACC 15
GRHL1_CP2_DBD_dimer-of-dimers_17_1 SELEX + 152485772 152485788 2.0E-06 AACCTGTTAATCAGGCT 17
GRHL1_CP2_DBD_dimer-of-dimers_17_1 SELEX - 152485772 152485788 1.0E-06 AGCCTGATTAACAGGTT 17
MEF2A_MA0052.1 JASPAR - 152486539 152486548 5.0E-06 CTATTTTTAT 10
HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 152486925 152486934 9.0E-06 CTTATAAAAA 10
OTX2_homeodomain_DBD_monomeric_8_1 SELEX - 152479833 152479840 7.0E-06 TTAATCCT 8
FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 152479748 152479761 5.0E-06 TGCCAACATTGACA 14
FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 152479748 152479761 6.0E-06 TGTCAATGTTGGCA 14
PRDM4_C2H2_full_monomeric_13_1 SELEX + 152479576 152479588 2.0E-06 TTTCAGGGCTCCC 13
HOXA13_homeodomain_full_monomeric_10_1 SELEX + 152486925 152486934 7.0E-06 CTTATAAAAA 10
TEAD3_TEA_DBD_monomeric_8_1 SELEX - 152485726 152485733 1.0E-05 ACATTCCA 8
FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 152479748 152479761 3.0E-06 TGCCAACATTGACA 14
FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 152479748 152479761 5.0E-06 TGTCAATGTTGGCA 14
HOXA13_homeodomain_full_monomeric_11_1 SELEX + 152486924 152486934 4.0E-06 TCTTATAAAAA 11
HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 152486925 152486934 6.0E-06 CTTATAAAAA 10
Mafb_bZIP_DBD_dimeric_18_1 SELEX - 152479778 152479795 6.0E-06 TGTGATGACATCAACTTA 18
BATF3_bZIP_DBD_dimeric_14_1 SELEX - 152479780 152479793 3.0E-06 TGATGACATCAACT 14
NR3C1_nuclearreceptor_DBD_dimeric_17_1 SELEX + 152479732 152479748 6.0E-06 AGGAAGACAATGTACCT 17
NR3C1_nuclearreceptor_DBD_dimeric_17_1 SELEX - 152479732 152479748 7.0E-06 AGGTACATTGTCTTCCT 17
AR_nuclearreceptor_full_dimeric_17_1 SELEX + 152479732 152479748 4.0E-06 AGGAAGACAATGTACCT 17
AR_nuclearreceptor_full_dimeric_17_1 SELEX - 152479732 152479748 6.0E-06 AGGTACATTGTCTTCCT 17
V_FOXP1_01_M00987 TRANSFAC + 152486638 152486657 5.0E-06 GTGTGTGTGTGTGTGTGTAT 20
V_AP1_Q2_M00173 TRANSFAC + 152486796 152486806 6.0E-06 AGTGACTTAGA 11
V_AML_Q6_M00769 TRANSFAC + 152486481 152486495 7.0E-06 TAGCTTGTGGTCTGC 15
V_FXR_Q3_M00631 TRANSFAC + 152479809 152479822 7.0E-06 TAGGTGCAGTGAAT 14
V_MAFK_03_M02776 TRANSFAC + 152479698 152479712 3.0E-06 AGATTATGATGACTT 15
V_BCL6_01_M01183 TRANSFAC + 152485819 152485834 9.0E-06 TTTGTGACTTATCTTT 16
V_MEF2_02_M00231 TRANSFAC + 152486532 152486553 9.0E-06 AATCAAGATAAAAATAGGTGAA 22
V_CEBP_Q2_M00190 TRANSFAC - 152479664 152479677 9.0E-06 AGGTTGCATAACAA 14
V_P53_DECAMER_Q2_M00761 TRANSFAC - 152479627 152479636 9.0E-06 AGACATGCCC 10
V_HOXD13_01_M01404 TRANSFAC + 152486922 152486937 6.0E-06 CTTCTTATAAAAAGGT 16
V_BRN2_01_M00145 TRANSFAC + 152485794 152485809 4.0E-06 TCCATGTTAAATGAAA 16
V_HOXC13_01_M01317 TRANSFAC + 152486921 152486936 8.0E-06 ACTTCTTATAAAAAGG 16
V_MEF2A_Q6_M02024 TRANSFAC - 152486538 152486547 4.0E-06 TATTTTTATC 10
V_CEBPB_02_M00117 TRANSFAC - 152479664 152479677 5.0E-06 AGGTTGCATAACAA 14
V_MEF2_Q6_01_M00941 TRANSFAC - 152486539 152486550 3.0E-06 ACCTATTTTTAT 12
V_IRX5_01_M01472 TRANSFAC + 152485790 152485806 1.0E-05 TAAATCCATGTTAAATG 17
V_ICSBP_Q6_M00699 TRANSFAC + 152485801 152485812 1.0E-05 TAAATGAAACTG 12
V_AP1FJ_Q2_M00172 TRANSFAC + 152486796 152486806 2.0E-06 AGTGACTTAGA 11
V_NANOG_01_M01123 TRANSFAC - 152486886 152486897 0.0E+00 GGGCCCATTTCC 12
V_CPHX_01_M01478 TRANSFAC - 152479781 152479794 1.0E-06 GTGATGACATCAAC 14
V_CPHX_01_M01478 TRANSFAC + 152479782 152479795 2.0E-06 TTGATGTCATCACA 14
V_TCF7_04_M02921 TRANSFAC + 152486921 152486935 7.0E-06 ACTTCTTATAAAAAG 15
V_GATA6_01_M00462 TRANSFAC - 152485825 152485834 1.0E-06 AAAGATAAGT 10
V_P53_05_M01655 TRANSFAC - 152486763 152486782 3.0E-06 AGGATTGCTATGGCATGTTT 20
V_PLZF_02_M01075 TRANSFAC + 152485778 152485806 2.0E-06 TTAATCAGGCTCTAAATCCATGTTAAATG 29
V_PITX2_01_M01447 TRANSFAC + 152479829 152479845 5.0E-06 CCACAGGATTAATCAGC 17
V_MEF2A_05_M01301 TRANSFAC - 152486539 152486550 2.0E-06 ACCTATTTTTAT 12
V_GATA6_04_M02757 TRANSFAC + 152486532 152486548 4.0E-06 AATCAAGATAAAAATAG 17
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL