Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

FAM21C


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
253725 family with sequence similarity 21, member C chr10 +46217647 - 46223147 46222647

Transcription Factor Binding Sites

 
Download all TFBS in the FAM21C promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
THRB_nuclearreceptor_DBD_dimeric_20_1 SELEX + 46222638 46222657 2.0E-06 GTCACGTGACATCAGGTCAC 20
THRB_nuclearreceptor_DBD_dimeric_20_1 SELEX - 46222638 46222657 3.0E-06 GTGACCTGATGTCACGTGAC 20
GABPA_MA0062.2 JASPAR - 46222582 46222592 9.0E-06 GCGGAAGTGGA 11
Creb3l2_bZIP_DBD_dimeric_12_1 SELEX + 46222637 46222648 3.0E-06 TGTCACGTGACA 12
Creb3l2_bZIP_DBD_dimeric_12_1 SELEX - 46222637 46222648 3.0E-06 TGTCACGTGACA 12
ZBTB7B_C2H2_full_monomeric_12_1 SELEX + 46222874 46222885 7.0E-06 ACGACCCCCGAC 12
Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX + 46222638 46222647 2.0E-06 GTCACGTGAC 10
Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX - 46222638 46222647 2.0E-06 GTCACGTGAC 10
USF1_bHLH_DBD_dimeric_10_1 SELEX + 46222638 46222647 3.0E-06 GTCACGTGAC 10
USF1_bHLH_DBD_dimeric_10_1 SELEX - 46222638 46222647 3.0E-06 GTCACGTGAC 10
BHLHE41_bHLH_full_dimeric_10_1 SELEX + 46222638 46222647 1.0E-06 GTCACGTGAC 10
BHLHE41_bHLH_full_dimeric_10_1 SELEX - 46222638 46222647 1.0E-06 GTCACGTGAC 10
SREBF2_bHLH_DBD_dimeric_10_1 SELEX + 46222638 46222647 3.0E-06 GTCACGTGAC 10
SREBF2_bHLH_DBD_dimeric_10_1 SELEX - 46222638 46222647 3.0E-06 GTCACGTGAC 10
Bhlhb2_bHLH_DBD_monomeric_10_1 SELEX + 46222638 46222647 3.0E-06 GTCACGTGAC 10
Bhlhb2_bHLH_DBD_monomeric_10_1 SELEX - 46222638 46222647 3.0E-06 GTCACGTGAC 10
Srebf1_bHLH_DBD_dimeric_10_1 SELEX + 46222638 46222647 3.0E-06 GTCACGTGAC 10
Srebf1_bHLH_DBD_dimeric_10_1 SELEX - 46222638 46222647 3.0E-06 GTCACGTGAC 10
TFEB_bHLH_full_dimeric_10_1 SELEX + 46222638 46222647 3.0E-06 GTCACGTGAC 10
TFEB_bHLH_full_dimeric_10_1 SELEX - 46222638 46222647 3.0E-06 GTCACGTGAC 10
TFE3_bHLH_DBD_dimeric_10_1 SELEX + 46222638 46222647 4.0E-06 GTCACGTGAC 10
TFE3_bHLH_DBD_dimeric_10_1 SELEX - 46222638 46222647 4.0E-06 GTCACGTGAC 10
TFEC_bHLH_DBD_dimeric_10_1 SELEX + 46222638 46222647 8.0E-06 GTCACGTGAC 10
TFEC_bHLH_DBD_dimeric_10_1 SELEX - 46222638 46222647 8.0E-06 GTCACGTGAC 10
VDR_nuclearreceptor_full_dimeric_16_1 SELEX - 46222866 46222881 2.0E-06 GGGGTCGTCCGGTTCA 16
MLX_bHLH_full_dimeric_10_1 SELEX + 46222638 46222647 5.0E-06 GTCACGTGAC 10
MLX_bHLH_full_dimeric_10_1 SELEX - 46222638 46222647 5.0E-06 GTCACGTGAC 10
BHLHB3_bHLH_full_dimeric_10_1 SELEX + 46222638 46222647 2.0E-06 GTCACGTGAC 10
BHLHB3_bHLH_full_dimeric_10_1 SELEX - 46222638 46222647 2.0E-06 GTCACGTGAC 10
V_USF_Q6_M00187 TRANSFAC + 46222638 46222647 4.0E-06 GTCACGTGAC 10
V_USF_Q6_M00187 TRANSFAC - 46222638 46222647 4.0E-06 GTCACGTGAC 10
V_DEC2_Q2_M01843 TRANSFAC + 46222621 46222630 5.0E-06 GATCACGTGC 10
V_ARNT_02_M00539 TRANSFAC + 46222633 46222652 8.0E-06 GTTCTGTCACGTGACATCAG 20
V_ARNT_02_M00539 TRANSFAC - 46222633 46222652 8.0E-06 CTGATGTCACGTGACAGAAC 20
V_ARNT_01_M00236 TRANSFAC - 46222635 46222650 3.0E-06 GATGTCACGTGACAGA 16
V_AP2_Q6_01_M00915 TRANSFAC + 46222822 46222834 2.0E-06 CCGCCCTCAGGCT 13
RXRA_VDR_MA0074.1 JASPAR - 46222866 46222880 1.0E-05 GGGTCGTCCGGTTCA 15
V_ZNF219_01_M01122 TRANSFAC + 46222480 46222491 5.0E-06 CGCCCCCCGCCC 12
V_SREBP1_01_M00220 TRANSFAC + 46222637 46222647 9.0E-06 TGTCACGTGAC 11
V_SREBP1_01_M00220 TRANSFAC - 46222638 46222648 9.0E-06 TGTCACGTGAC 11
V_USF_02_M00122 TRANSFAC + 46222636 46222649 6.0E-06 CTGTCACGTGACAT 14
V_USF_02_M00122 TRANSFAC - 46222636 46222649 6.0E-06 ATGTCACGTGACAG 14
V_USF_01_M00121 TRANSFAC + 46222636 46222649 3.0E-06 CTGTCACGTGACAT 14
V_USF_01_M00121 TRANSFAC - 46222636 46222649 3.0E-06 ATGTCACGTGACAG 14
V_STRA13_01_M00985 TRANSFAC - 46222636 46222649 3.0E-06 ATGTCACGTGACAG 14
V_TFEB_01_M01768 TRANSFAC + 46222638 46222647 3.0E-06 GTCACGTGAC 10
V_TFEB_01_M01768 TRANSFAC - 46222638 46222647 3.0E-06 GTCACGTGAC 10
V_MAX_04_M02881 TRANSFAC + 46222636 46222649 2.0E-06 CTGTCACGTGACAT 14
V_MAX_04_M02881 TRANSFAC - 46222636 46222649 4.0E-06 ATGTCACGTGACAG 14
V_VDRRXR_01_M01202 TRANSFAC - 46222866 46222880 1.0E-05 GGGTCGTCCGGTTCA 15
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL