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FRG1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 2483 FSHD region gene 1 chr4 + 190856973 - 190862473 190861973 Transcription Factor Binding Sites   Download all TFBS in the FRG1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints GABPA_MA0062.2 JASPAR + 190861979 190861989 1.0E-06 CCGGAAGTGGA 11 SOX4_HMG_DBD_dimeric_16_1 SELEX + 190863765 190863780 9.0E-06 GAACATTTGGGTTGTT 16 POU2F1_POU_DBD_dimeric_14_1 SELEX + 190863812 190863825 9.0E-06 TGTGAATATTCTTA 14 POU2F1_POU_DBD_dimeric_14_1 SELEX - 190863812 190863825 2.0E-06 TAAGAATATTCACA 14 SPIC_ETS_full_monomeric_14_1 SELEX - 190863777 190863790 8.0E-06 AAAAAGGGGAAACA 14 SOX2_HMG_full_dimeric_17_1 SELEX - 190863800 190863816 3.0E-06 TCACACTAGCATTAGTC 17 NHLH1_MA0048.1 JASPAR + 190861918 190861929 3.0E-06 GAGCAGCTGCGC 12 NHLH1_MA0048.1 JASPAR - 190861918 190861929 2.0E-06 GCGCAGCTGCTC 12 ELF4_ETS_full_monomeric_12_1 SELEX + 190861976 190861987 0.0E+00 AACCCGGAAGTG 12 HINFP1_C2H2_full_monomeric_12_1 SELEX + 190861594 190861605 6.0E-06 CGACGTCCGCGA 12 NFIL3_MA0025.1 JASPAR + 190863823 190863833 5.0E-06 TTATGTAAGTA 11 Pax4_MA0068.1 JASPAR - 190863808 190863837 5.0E-06 AAAATACTTACATAAGAATATTCACACTAG 30 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX + 190862276 190862291 6.0E-06 CTCCACCCCCGCAACT 16 ELF3_ETS_full_monomeric_13_1 SELEX + 190861976 190861988 0.0E+00 AACCCGGAAGTGG 13 Pou2f2_POU_DBD_dimeric_14_1 SELEX + 190863812 190863825 1.0E-06 TGTGAATATTCTTA 14 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 190863812 190863825 0.0E+00 TAAGAATATTCACA 14 POU2F3_POU_DBD_dimeric_12_1 SELEX - 190863813 190863824 9.0E-06 AAGAATATTCAC 12 FOXI1_MA0042.1 JASPAR + 190862055 190862066 3.0E-06 GAGTGTTTATTT 12 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 190863904 190863918 4.0E-06 AAAAAGTTAAAGTTA 15 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX + 190863514 190863522 8.0E-06 CCCATTAAA 9 FEV_MA0156.1 JASPAR - 190861639 190861646 1.0E-05 CAGGAAAT 8 EHF_ETS_full_monomeric_12_1 SELEX + 190861976 190861987 0.0E+00 AACCCGGAAGTG 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 190863813 190863824 7.0E-06 AAGAATATTCAC 12 Pou5f1_MA0142.1 JASPAR + 190863818 190863832 1.0E-06 TATTCTTATGTAAGT 15 ELF5_ETS_full_monomeric_11_1 SELEX + 190861977 190861987 2.0E-06 ACCCGGAAGTG 11 ELF1_ETS_full_monomeric_12_1 SELEX + 190861976 190861987 0.0E+00 AACCCGGAAGTG 12 FOXI1_forkhead_full_dimeric_17_1 SELEX - 190861648 190861664 5.0E-06 GTGTGTGCAGGAAACAA 17 ELF3_ETS_DBD_monomeric_12_1 SELEX + 190861976 190861987 0.0E+00 AACCCGGAAGTG 12 ETV6_ETS_full_dimeric_15_1 SELEX + 190861979 190861993 4.0E-06 CCGGAAGTGGAACTC 15 POU3F3_POU_DBD_dimeric_12_1 SELEX - 190863819 190863830 9.0E-06 TTACATAAGAAT 12 NHLH1_bHLH_full_dimeric_10_1 SELEX + 190861919 190861928 5.0E-06 AGCAGCTGCG 10 NHLH1_bHLH_full_dimeric_10_1 SELEX - 190861919 190861928 4.0E-06 CGCAGCTGCT 10 NFE2L2_MA0150.1 JASPAR - 190863889 190863899 3.0E-06 ATGACCCAGCA 11 V_TEL1_02_M02070 TRANSFAC + 190861978 190861987 5.0E-06 CCCGGAAGTG 10 V_NERF_01_M01976 TRANSFAC + 190861978 190861987 9.0E-06 CCCGGAAGTG 10 V_POU5F1_02_M02245 TRANSFAC + 190863818 190863832 1.0E-06 TATTCTTATGTAAGT 15 V_EBOX_Q6_01_M01034 TRANSFAC - 190863894 190863903 8.0E-06 CCACATGACC 10 V_GABP_B_M00341 TRANSFAC + 190861978 190861989 2.0E-06 CCCGGAAGTGGA 12 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 190862003 190862018 2.0E-06 CAGCGTTTGGGTGAAG 16 V_OCT2_02_M01761 TRANSFAC + 190863814 190863823 2.0E-06 TGAATATTCT 10 V_OCT2_02_M01761 TRANSFAC - 190863814 190863823 2.0E-06 AGAATATTCA 10 V_ELF2_02_M02054 TRANSFAC + 190861978 190861987 8.0E-06 CCCGGAAGTG 10 V_DBP_Q6_01_M01872 TRANSFAC + 190863823 190863830 5.0E-06 TTATGTAA 8 V_OCT1_02_M00136 TRANSFAC - 190863810 190863824 0.0E+00 AAGAATATTCACACT 15 V_OCT1_02_M00136 TRANSFAC + 190863813 190863827 9.0E-06 GTGAATATTCTTATG 15 V_ZFP410_03_M02832 TRANSFAC - 190863525 190863541 7.0E-06 GAGGATGGGATGTGACT 17 V_E4BP4_01_M00045 TRANSFAC + 190863821 190863832 7.0E-06 TCTTATGTAAGT 12 V_TEF_Q6_M00672 TRANSFAC - 190863823 190863834 1.0E-06 ATACTTACATAA 12 V_NGFIC_01_M00244 TRANSFAC - 190862278 190862289 7.0E-06 TTGCGGGGGTGG 12 V_SPDEF_03_M02811 TRANSFAC - 190861973 190861988 4.0E-06 CCACTTCCGGGTTTCT 16 V_GADP_01_M01258 TRANSFAC - 190861976 190861987 2.0E-06 CACTTCCGGGTT 12 V_OCT1_04_M00138 TRANSFAC + 190863811 190863833 4.0E-06 GTGTGAATATTCTTATGTAAGTA 23 V_SRF_Q5_02_M01007 TRANSFAC + 190863778 190863796 6.0E-06 GTTTCCCCTTTTTGGCTAT 19 V_TEL1_01_M01993 TRANSFAC + 190861978 190861987 5.0E-06 CCCGGAAGTG 10 V_OCT4_02_M01124 TRANSFAC + 190863819 190863833 8.0E-06 ATTCTTATGTAAGTA 15 V_ELF4_01_M01979 TRANSFAC + 190861978 190861987 4.0E-06 CCCGGAAGTG 10 V_KAISO_01_M01119 TRANSFAC - 190861795 190861804 9.0E-06 CTCCTGCTAG 10 V_HOXD9_Q2_M01834 TRANSFAC + 190863513 190863522 5.0E-06 ACCCATTAAA 10 V_HFH8_01_M00294 TRANSFAC + 190862055 190862067 7.0E-06 GAGTGTTTATTTC 13 V_RARA_04_M02891 TRANSFAC + 190863887 190863902 7.0E-06 ATTGCTGGGTCATGTG 16 V_EHF_06_M02745 TRANSFAC + 190861974 190861988 6.0E-06 GAAACCCGGAAGTGG 15 V_TBP_04_M02918 TRANSFAC + 190863514 190863528 4.0E-06 CCCATTAAAGCAGTC 15 V_EGR1_06_M02744 TRANSFAC + 190862277 190862290 8.0E-06 TCCACCCCCGCAAC 14 V_NFE2_Q6_M02104 TRANSFAC - 190863885 190863900 2.0E-06 CATGACCCAGCAATTT 16 V_GSC_01_M01428 TRANSFAC + 190863562 190863578 5.0E-06 AACCACTAATCCGCTCT 17 V_FOXO1_01_M00473 TRANSFAC - 190862056 190862065 9.0E-06 AATAAACACT 10 V_RFX3_04_M02788 TRANSFAC + 190863549 190863571 4.0E-06 CCTAGTCCTTGGCAACCACTAAT 23 V_ELF_02_M02053 TRANSFAC + 190861978 190861987 1.0E-05 CCCGGAAGTG 10 V_NFE2L2_01_M02263 TRANSFAC - 190863889 190863899 3.0E-06 ATGACCCAGCA 11 V_FOXO4_01_M00472 TRANSFAC - 190862054 190862064 8.0E-06 ATAAACACTCC 11 V_FEV_01_M02269 TRANSFAC - 190861639 190861646 1.0E-05 CAGGAAAT 8 V_PAX4_04_M00380 TRANSFAC - 190863810 190863839 0.0E+00 CAAAAATACTTACATAAGAATATTCACACT 30 V_OCT4_01_M01125 TRANSFAC + 190863818 190863832 1.0E-06 TATTCTTATGTAAGT 15 V_OTX3_01_M01403 TRANSFAC - 190863563 190863579 8.0E-06 GAGAGCGGATTAGTGGT 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.