Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

KCNE1L


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
23630 KCNE1-like chrX -108867893 - 108873393 108868393

Transcription Factor Binding Sites

 
Download all TFBS in the KCNE1L promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
NFIA_NFI_full_dimeric_15_1 SELEX + 108872732 108872746 0.0E+00 TTGGCTAGTTGCCAA 15
NFIA_NFI_full_dimeric_15_1 SELEX - 108872732 108872746 0.0E+00 TTGGCAACTAGCCAA 15
SPIC_ETS_full_monomeric_14_1 SELEX + 108872532 108872545 9.0E-06 GACAAAGGGAAGTA 14
EWSR1-FLI1_MA0149.1 JASPAR + 108872814 108872831 6.0E-06 GGAGAGAAAGAAAGAAGG 18
NFIX_NFI_full_dimeric_15_2 SELEX + 108872732 108872746 0.0E+00 TTGGCTAGTTGCCAA 15
NFIX_NFI_full_dimeric_15_2 SELEX - 108872732 108872746 0.0E+00 TTGGCAACTAGCCAA 15
SP1_MA0079.2 JASPAR + 108868443 108868452 9.0E-06 CCCCTCCTCC 10
Mafb_bZIP_DBD_dimeric_17_1 SELEX + 108867400 108867416 5.0E-06 TCTGCAGAGTGAGCAGT 17
INSM1_MA0155.1 JASPAR + 108868397 108868408 1.0E-05 TGGCTGGGGGCG 12
NFIB_NFI_full_dimeric_15_1 SELEX + 108872732 108872746 0.0E+00 TTGGCTAGTTGCCAA 15
NFIB_NFI_full_dimeric_15_1 SELEX - 108872732 108872746 0.0E+00 TTGGCAACTAGCCAA 15
NFIA_NFI_full_monomeric_10_1 SELEX + 108867487 108867496 2.0E-06 AGTGCCAAGT 10
V_E2A_Q6_01_M02088 TRANSFAC + 108868529 108868541 8.0E-06 GGACAGCTGGTGG 13
V_SMAD3_Q6_01_M01888 TRANSFAC + 108872748 108872760 5.0E-06 GGACAGACACAGA 13
V_NF1_Q6_01_M00806 TRANSFAC + 108872732 108872748 0.0E+00 TTGGCTAGTTGCCAAAG 17
V_NF1A_Q6_M02103 TRANSFAC - 108872731 108872746 2.0E-06 TTGGCAACTAGCCAAA 16
V_NF1A_Q6_M02103 TRANSFAC + 108872732 108872747 0.0E+00 TTGGCTAGTTGCCAAA 16
V_ETS_B_M00340 TRANSFAC - 108872672 108872685 9.0E-06 GGCAGGAAGCACTC 14
V_EGR_Q6_M00807 TRANSFAC + 108868563 108868573 2.0E-06 GTGGGGGCGAG 11
V_SP1_03_M02281 TRANSFAC + 108868443 108868452 9.0E-06 CCCCTCCTCC 10
V_TAL1_GATA1_01_M02243 TRANSFAC - 108870029 108870046 2.0E-06 CCTGTTTTAACAGATAAG 18
V_SP4_03_M02810 TRANSFAC + 108868460 108868476 9.0E-06 CACCACGCCCCCTCCGG 17
V_ZBP89_Q4_M01816 TRANSFAC - 108868540 108868549 6.0E-06 TCCTCCCCCC 10
V_MAZ_Q6_01_M02023 TRANSFAC - 108868439 108868452 1.0E-05 GGAGGAGGGGCGGG 14
V_AP2BETA_Q3_M01858 TRANSFAC - 108868469 108868484 9.0E-06 GCCGCGGGCCGGAGGG 16
V_MATH1_Q2_M01716 TRANSFAC + 108868531 108868540 6.0E-06 ACAGCTGGTG 10
Tal1_Gata1_MA0140.1 JASPAR - 108870029 108870046 2.0E-06 CCTGTTTTAACAGATAAG 18
V_SP1SP3_Q4_M01219 TRANSFAC + 108868464 108868474 7.0E-06 ACGCCCCCTCC 11
V_TAL1BETAE47_01_M00065 TRANSFAC + 108872752 108872767 8.0E-06 AGACACAGATGGTAAG 16
V_BBX_04_M02843 TRANSFAC + 108870031 108870047 2.0E-06 TATCTGTTAAAACAGGA 17
V_LHX3b_01_M01971 TRANSFAC + 108872541 108872550 5.0E-06 AAGTAATTTA 10
V_INSM1_01_M02268 TRANSFAC + 108868397 108868408 1.0E-05 TGGCTGGGGGCG 12
V_HNF4A_02_M02868 TRANSFAC + 108872612 108872627 5.0E-06 TTTAAAAGTACAATTG 16
V_BCL6B_04_M02844 TRANSFAC + 108868436 108868451 9.0E-06 ACTCCCGCCCCTCCTC 16
V_HBP1_04_M02866 TRANSFAC - 108872528 108872544 8.0E-06 ACTTCCCTTTGTCAACA 17
V_T3R_01_M00239 TRANSFAC - 108865724 108865739 3.0E-06 CCATAAGGTCACCCCT 16
V_CAAT_C_M00200 TRANSFAC + 108865701 108865725 8.0E-06 CCCAATCCCTGGCCCTCACCTTCAG 25
V_FOXL1_02_M02857 TRANSFAC - 108872604 108872619 8.0E-06 CTTTTAAAACAAACTT 16
V_OCT1_Q6_M00195 TRANSFAC - 108872543 108872557 1.0E-05 ATGATTGTAAATTAC 15
V_EBNA1_01_M01745 TRANSFAC + 108872638 108872653 0.0E+00 GATAGGAAATGCTTTC 16
V_EBNA1_01_M01745 TRANSFAC - 108872638 108872653 7.0E-06 GAAAGCATTTCCTATC 16
V_MYOGNF1_01_M00056 TRANSFAC - 108872730 108872758 7.0E-06 TGTGTCTGTCCTTTGGCAACTAGCCAAAC 29
V_HDX_01_M01333 TRANSFAC + 108872545 108872561 8.0E-06 AATTTACAATCATGTAT 17
V_FPM315_01_M01587 TRANSFAC - 108868444 108868455 4.0E-06 AGGGGAGGAGGG 12
V_IRX2_01_M01405 TRANSFAC - 108872548 108872564 7.0E-06 TAAATACATGATTGTAA 17
V_ZFP281_04_M02831 TRANSFAC - 108868537 108868551 3.0E-06 TCTCCTCCCCCCACC 15
V_EWSR1FLI1_01_M02252 TRANSFAC + 108872814 108872831 6.0E-06 GGAGAGAAAGAAAGAAGG 18
V_VMAF_01_M00035 TRANSFAC - 108867399 108867417 1.0E-05 GACTGCTCACTCTGCAGAG 19
V_CTF1_01_M01196 TRANSFAC - 108872732 108872745 0.0E+00 TGGCAACTAGCCAA 14
V_CTF1_01_M01196 TRANSFAC + 108872733 108872746 3.0E-06 TGGCTAGTTGCCAA 14
V_EHF_07_M02849 TRANSFAC - 108872636 108872651 5.0E-06 AAGCATTTCCTATCCA 16
V_RNF96_01_M01199 TRANSFAC + 108868476 108868485 7.0E-06 GCCCGCGGCC 10
TLX1_NFIC_MA0119.1 JASPAR - 108872732 108872745 0.0E+00 TGGCAACTAGCCAA 14
TLX1_NFIC_MA0119.1 JASPAR + 108872733 108872746 3.0E-06 TGGCTAGTTGCCAA 14
V_SPI1_02_M02043 TRANSFAC + 108872536 108872545 6.0E-06 AAGGGAAGTA 10
V_NF1_Q6_M00193 TRANSFAC + 108872730 108872747 0.0E+00 GTTTGGCTAGTTGCCAAA 18
V_NF1_Q6_M00193 TRANSFAC - 108872731 108872748 0.0E+00 CTTTGGCAACTAGCCAAA 18
V_NANOG_02_M01247 TRANSFAC + 108872810 108872829 7.0E-06 TAAAGGAGAGAAAGAAAGAA 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL