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SPO11 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 23626 SPO11 meiotic protein covalently bound to DSB chr20 + 55899830 - 55905330 55904830 Transcription Factor Binding Sites   Download all TFBS in the SPO11 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 55905124 55905142 9.0E-06 TCAACACTAGGAGGCAGCC 19 HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 55907782 55907790 2.0E-06 CTAATAAAA 9 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 55907782 55907791 9.0E-06 CTAATAAAAT 10 Foxa2_MA0047.2 JASPAR + 55901818 55901829 4.0E-06 TGTTGACTTTGA 12 POU3F3_POU_DBD_monomeric_12_1 SELEX - 55906304 55906315 6.0E-06 AAGAATAAATTG 12 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX - 55901802 55901812 1.0E-05 AGCCCCAGGCT 11 Alx1_homeodomain_DBD_dimeric_13_1 SELEX + 55907777 55907789 8.0E-06 TTAACCTAATAAA 13 RUNX3_RUNX_DBD_dimeric_16_1 SELEX - 55901993 55902008 2.0E-06 AAACCGCAAAGTGCAA 16 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 55901802 55901812 9.0E-06 AGCCCCAGGCT 11 ISX_homeodomain_DBD_dimeric_13_1 SELEX + 55907777 55907789 1.0E-05 TTAACCTAATAAA 13 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 55906175 55906188 9.0E-06 AAAAAATGTTGTTC 14 Barhl1_homeodomain_DBD_monomeric_10_1 SELEX + 55906328 55906337 3.0E-06 ATTAAACGTT 10 Hic1_C2H2_DBD_monomer_9_1 SELEX - 55901731 55901739 7.0E-06 ATGCCAACT 9 RUNX3_RUNX_full_monomeric_10_1 SELEX - 55901999 55902008 1.0E-06 AAACCGCAAA 10 PROP1_homeodomain_full_dimeric_11_1 SELEX + 55907778 55907788 1.0E-05 TAACCTAATAA 11 RUNX2_RUNX_DBD_monomeric_9_1 SELEX - 55902000 55902008 3.0E-06 AAACCGCAA 9 RUNX2_RUNX_DBD_dimeric_16_1 SELEX - 55901993 55902008 1.0E-06 AAACCGCAAAGTGCAA 16 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 55907782 55907790 7.0E-06 CTAATAAAA 9 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 55907782 55907791 2.0E-06 CTAATAAAAT 10 ALX3_homeodomain_full_dimeric_13_1 SELEX + 55907777 55907789 6.0E-06 TTAACCTAATAAA 13 DRGX_homeodomain_DBD_dimeric_13_1 SELEX + 55907777 55907789 4.0E-06 TTAACCTAATAAA 13 PHOX2B_homeodomain_full_dimeric_11_1 SELEX + 55907778 55907788 9.0E-06 TAACCTAATAA 11 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 55907782 55907791 2.0E-06 CTAATAAAAT 10 PRRX1_homeodomain_full_dimeric_11_1 SELEX + 55907778 55907788 5.0E-06 TAACCTAATAA 11 CART1_homeodomain_DBD_dimeric_13_1 SELEX + 55907777 55907789 2.0E-06 TTAACCTAATAAA 13 IRF9_IRF_full_trimeric_15_1 SELEX - 55901745 55901759 7.0E-06 ATTGCAAATGAAACT 15 TGIF2LX_MEIS_full_dimeric_12_1 SELEX - 55907715 55907726 9.0E-06 TGTCAGGTGTAA 12 TFAP2C_TFAP_full_dimeric_11_1 SELEX - 55901802 55901812 8.0E-06 AGCCCCAGGCT 11 MTF1_C2H2_DBD_monomeric_14_1 SELEX + 55902040 55902053 8.0E-06 TTTGCTCACTTCAC 14 SPDEF_ETS_full_putative-multimer_16_1 SELEX - 55906329 55906344 6.0E-06 AAAGGAAAACGTTTAA 16 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 55907782 55907791 2.0E-06 CTAATAAAAT 10 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX + 55907778 55907788 6.0E-06 TAACCTAATAA 11 Mafb_bZIP_DBD_dimeric_18_1 SELEX - 55901940 55901957 5.0E-06 TGCGCTGACAAAAGCAGG 18 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 55907782 55907799 9.0E-06 CTAATAAAATTGTTATTT 18 CDX2_homeodomain_DBD_monomeric_9_1 SELEX + 55907782 55907790 9.0E-06 CTAATAAAA 9 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 55901802 55901812 6.0E-06 AGCCCCAGGCT 11 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX + 55907782 55907791 2.0E-06 CTAATAAAAT 10 V_LEF1_04_M02774 TRANSFAC + 55901819 55901835 1.0E-05 GTTGACTTTGATGTGAA 17 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 55905091 55905102 4.0E-06 ACTTTTCTACAG 12 V_IRF2_Q6_M01882 TRANSFAC - 55901743 55901758 5.0E-06 TTGCAAATGAAACTGA 16 V_IRF2_Q6_M01882 TRANSFAC - 55906132 55906147 8.0E-06 TAGGAAGAGAAATCAA 16 V_IRF3_05_M02767 TRANSFAC - 55906334 55906347 9.0E-06 CAAAAAGGAAAACG 14 V_NKX24_01_M01350 TRANSFAC + 55906094 55906109 8.0E-06 TAAAACTCTCAACATT 16 V_HOXD13_01_M01404 TRANSFAC + 55907779 55907794 0.0E+00 AACCTAATAAAATTGT 16 V_HOXC13_01_M01317 TRANSFAC + 55907778 55907793 3.0E-06 TAACCTAATAAAATTG 16 V_GC_01_M00255 TRANSFAC - 55904794 55904807 8.0E-06 CAGAGGCGGGGCTG 14 V_SOX7_03_M02807 TRANSFAC - 55907781 55907802 3.0E-06 ATAAAATAACAATTTTATTAGG 22 V_HELIOSA_02_M01004 TRANSFAC - 55906335 55906345 2.0E-06 AAAAGGAAAAC 11 V_TCF3_04_M02816 TRANSFAC - 55901819 55901835 4.0E-06 TTCACATCAAAGTCAAC 17 V_HOXB13_01_M01467 TRANSFAC + 55907779 55907794 0.0E+00 AACCTAATAAAATTGT 16 V_ZBP89_Q4_M01816 TRANSFAC - 55901854 55901863 4.0E-06 CCCTCCCCCA 10 V_IRF_Q6_M00772 TRANSFAC + 55901742 55901756 2.0E-06 GTCAGTTTCATTTGC 15 V_MATH1_Q2_M01716 TRANSFAC + 55907730 55907739 9.0E-06 CCACCTGGTG 10 V_TCF7_03_M02817 TRANSFAC - 55901819 55901835 4.0E-06 TTCACATCAAAGTCAAC 17 V_ISGF3G_03_M02771 TRANSFAC - 55901743 55901757 4.0E-06 TGCAAATGAAACTGA 15 V_IK3_01_M00088 TRANSFAC + 55902013 55902025 4.0E-06 TCTTAGGAATGCC 13 V_ICSBP_Q6_M00699 TRANSFAC - 55901744 55901755 1.0E-05 CAAATGAAACTG 12 V_NEUROD_02_M01288 TRANSFAC - 55901844 55901855 7.0E-06 CAGCAGCTGTGT 12 V_LEF1_Q2_01_M01022 TRANSFAC - 55901822 55901831 8.0E-06 CATCAAAGTC 10 V_FOXA2_03_M02260 TRANSFAC + 55901818 55901829 4.0E-06 TGTTGACTTTGA 12 V_FOX_Q2_M00809 TRANSFAC + 55901815 55901827 8.0E-06 GACTGTTGACTTT 13 V_PR_02_M00957 TRANSFAC - 55906168 55906194 6.0E-06 AGCTGCAAAAAATGTTGTTCTGTTATA 27 V_RFX3_04_M02788 TRANSFAC - 55901755 55901777 7.0E-06 TTCTGCTCCTAGCAACACATTGC 23 V_HOXA10_01_M01464 TRANSFAC + 55907779 55907794 3.0E-06 AACCTAATAAAATTGT 16 V_AP2ALPHA_03_M01047 TRANSFAC + 55901800 55901814 1.0E-05 ACAGCCTGGGGCTGG 15 V_AP2ALPHA_03_M01047 TRANSFAC - 55901800 55901814 1.0E-05 CCAGCCCCAGGCTGT 15 V_HOXD10_01_M01375 TRANSFAC + 55907779 55907795 0.0E+00 AACCTAATAAAATTGTT 17 V_PBX1_04_M01357 TRANSFAC - 55901820 55901836 1.0E-05 CTTCACATCAAAGTCAA 17 V_AP2_Q3_M00800 TRANSFAC - 55901797 55901812 3.0E-06 AGCCCCAGGCTGTGAG 16 V_ER_Q6_M00191 TRANSFAC + 55907767 55907785 4.0E-06 GCAGTTCAACTTAACCTAA 19 V_TCF4_01_M01705 TRANSFAC + 55901823 55901831 7.0E-06 ACTTTGATG 9

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.