Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

CLEC5A Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 23601 C-type lectin domain family 5, member A chr7 - 141646283 - 141651783 141646783 Transcription Factor Binding Sites   Download all TFBS in the CLEC5A promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SPIC_ETS_full_monomeric_14_1 SELEX - 141645472 141645485 1.0E-06 TAAATGAGGAAGGA 14 Zfp652_C2H2_DBD_monomeric_13_1 SELEX + 141649117 141649129 7.0E-06 CCAAAGAGTTAAG 13 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 141645257 141645273 6.0E-06 ACAAACAAGTATCAGCA 17 TEF_bZIP_DBD_dimeric_12_1 SELEX - 141649058 141649069 9.0E-06 TATTGCATAATA 12 HLF_bZIP_full_dimeric_12_1 SELEX + 141649058 141649069 1.0E-05 TATTATGCAATA 12 HLF_bZIP_full_dimeric_12_1 SELEX - 141649058 141649069 9.0E-06 TATTGCATAATA 12 IRF7_IRF_DBD_trimeric_17_1 SELEX + 141645203 141645219 7.0E-06 GAAAAGAAAATCAGCTG 17 SPIB_ETS_DBD_monomeric_14_1 SELEX + 141644770 141644783 8.0E-06 CTTAAGAGGAAGTG 14 SPIB_ETS_DBD_monomeric_14_1 SELEX - 141645472 141645485 5.0E-06 TAAATGAGGAAGGA 14 CEBPB_bZIP_full_dimeric_10_1 SELEX + 141649059 141649068 7.0E-06 ATTATGCAAT 10 ATF4_bZIP_DBD_dimeric_13_1 SELEX - 141645418 141645430 1.0E-06 TCATGATGCAATC 13 ATF4_bZIP_DBD_dimeric_13_1 SELEX + 141649057 141649069 6.0E-06 GTATTATGCAATA 13 Atf4_bZIP_DBD_dimeric_14_1 SELEX + 141649056 141649069 4.0E-06 TGTATTATGCAATA 14 NFIL3_bZIP_DBD_dimeric_12_1 SELEX - 141649058 141649069 1.0E-06 TATTGCATAATA 12 POU3F1_POU_DBD_monomeric_12_2 SELEX - 141649056 141649067 5.0E-06 TTGCATAATACA 12 TFAP4_bHLH_full_dimeric_10_1 SELEX + 141645212 141645221 2.0E-06 ATCAGCTGTT 10 TFAP4_bHLH_full_dimeric_10_1 SELEX - 141645212 141645221 1.0E-06 AACAGCTGAT 10 TFAP4_bHLH_full_dimeric_10_1 SELEX + 141649356 141649365 2.0E-06 ATCAGCTGTT 10 TFAP4_bHLH_full_dimeric_10_1 SELEX - 141649356 141649365 1.0E-06 AACAGCTGAT 10 HLF_MA0043.1 JASPAR + 141649058 141649069 9.0E-06 TATTATGCAATA 12 SPI1_ETS_full_monomeric_14_1 SELEX - 141645472 141645485 6.0E-06 TAAATGAGGAAGGA 14 HMBOX1_homeodomain_DBD_monomeric_10_1 SELEX - 141645561 141645570 7.0E-06 CCTAGTTAAA 10 MSC_bHLH_full_dimeric_10_1 SELEX - 141645212 141645221 9.0E-06 AACAGCTGAT 10 MSC_bHLH_full_dimeric_10_1 SELEX - 141649356 141649365 9.0E-06 AACAGCTGAT 10 V_HSF2_01_M00147 TRANSFAC + 141645512 141645521 8.0E-06 AGAAGATTCT 10 V_HSF2_01_M00147 TRANSFAC - 141645512 141645521 4.0E-06 AGAATCTTCT 10 V_GEN_INI_B_M00315 TRANSFAC + 141645477 141645484 1.0E-05 CCTCATTT 8 V_POU3F3_01_M03090 TRANSFAC - 141645364 141645380 1.0E-06 GAAATATGAATAAGGGA 17 V_POU3F3_01_M03090 TRANSFAC - 141649056 141649072 1.0E-06 TAATATTGCATAATACA 17 V_EVI1_05_M00082 TRANSFAC + 141645393 141645403 1.0E-05 TGACATGATAG 11 V_SOX40_04_M02908 TRANSFAC + 141649065 141649080 2.0E-06 CAATATTATAATTGCC 16 V_SRY_07_M02813 TRANSFAC + 141649065 141649080 3.0E-06 CAATATTATAATTGCC 16 V_SRY_07_M02813 TRANSFAC - 141649065 141649080 0.0E+00 GGCAATTATAATATTG 16 V_SRY_07_M02813 TRANSFAC - 141649103 141649118 9.0E-06 GGTAATTACAATGTAG 16 V_CEBP_Q3_M00770 TRANSFAC + 141649057 141649068 8.0E-06 GTATTATGCAAT 12 V_DLX3_01_M01400 TRANSFAC + 141649105 141649121 6.0E-06 ACATTGTAATTACCAAA 17 V_HMGIY_Q3_M01010 TRANSFAC + 141645369 141645383 5.0E-06 TATTCATATTTCTGT 15 V_ETS_B_M00340 TRANSFAC + 141644773 141644786 5.0E-06 AAGAGGAAGTGAGA 14 V_CBF_02_M01080 TRANSFAC + 141645340 141645355 2.0E-06 ATAAATGTGGTTTTGT 16 V_MAFB_03_M02879 TRANSFAC + 141645333 141645347 8.0E-06 AAGATGCATAAATGT 15 V_MAFB_03_M02879 TRANSFAC + 141645528 141645542 5.0E-06 TGATTGCAGTAAAAT 15 V_MAFB_03_M02879 TRANSFAC - 141649056 141649070 6.0E-06 ATATTGCATAATACA 15 V_OCTAMER_01_M01324 TRANSFAC - 141645364 141645380 1.0E-06 GAAATATGAATAAGGGA 17 V_OCTAMER_01_M01324 TRANSFAC - 141649056 141649072 1.0E-06 TAATATTGCATAATACA 17 V_SRY_02_M00160 TRANSFAC - 141645178 141645189 3.0E-06 TTTAACAAAAGT 12 V_CEBP_01_M00159 TRANSFAC - 141649111 141649123 2.0E-06 TCTTTGGTAATTA 13 V_POU1F1_Q6_M00744 TRANSFAC + 141645336 141645345 2.0E-06 ATGCATAAAT 10 V_CEBP_Q2_M00190 TRANSFAC + 141645417 141645430 2.0E-06 AGATTGCATCATGA 14 V_CEBP_Q2_M00190 TRANSFAC - 141649057 141649070 0.0E+00 ATATTGCATAATAC 14 V_HOXA2_01_M01402 TRANSFAC + 141649107 141649122 1.0E-06 ATTGTAATTACCAAAG 16 V_DLX2_01_M01468 TRANSFAC + 141649069 141649084 7.0E-06 ATTATAATTGCCTGAG 16 V_DLX2_01_M01468 TRANSFAC + 141649107 141649122 3.0E-06 ATTGTAATTACCAAAG 16 V_HOXC6_01_M01406 TRANSFAC + 141649106 141649122 2.0E-06 CATTGTAATTACCAAAG 17 V_AP4_Q6_02_M01860 TRANSFAC + 141645213 141645225 7.0E-06 TCAGCTGTTGGCT 13 V_PU1_Q4_M01172 TRANSFAC - 141644771 141644789 0.0E+00 TCCTCTCACTTCCTCTTAA 19 V_PU1_Q4_M01172 TRANSFAC + 141645466 141645484 0.0E+00 CACGTTTCCTTCCTCATTT 19 V_SOX21_03_M02803 TRANSFAC + 141649065 141649080 5.0E-06 CAATATTATAATTGCC 16 V_SOX21_03_M02803 TRANSFAC - 141649065 141649080 2.0E-06 GGCAATTATAATATTG 16 V_CEBPB_01_M00109 TRANSFAC + 141649057 141649070 0.0E+00 GTATTATGCAATAT 14 V_BARBIE_01_M00238 TRANSFAC - 141650692 141650706 9.0E-06 TCCAAAAGCTGAAGG 15 V_RPC155_01_M01798 TRANSFAC - 141650712 141650727 8.0E-06 CCACTGGTTTAAGTCC 16 V_ETS_Q4_M00771 TRANSFAC - 141644775 141644786 1.0E-05 TCTCACTTCCTC 12 V_GEN_INI3_B_M00314 TRANSFAC + 141645477 141645484 1.0E-05 CCTCATTT 8 V_FOXA2_02_M02853 TRANSFAC + 141645702 141645716 3.0E-06 AACAATAACAAGCGC 15 V_HOXA6_01_M01392 TRANSFAC + 141649107 141649122 0.0E+00 ATTGTAATTACCAAAG 16 V_SPI1_03_M02078 TRANSFAC + 141644774 141644783 1.0E-06 AGAGGAAGTG 10 V_CEBPE_Q6_M01868 TRANSFAC + 141645415 141645428 9.0E-06 TCAGATTGCATCAT 14 V_CEBPE_Q6_M01868 TRANSFAC - 141649059 141649072 0.0E+00 TAATATTGCATAAT 14 V_ARID5A_03_M02736 TRANSFAC - 141649060 141649073 1.0E-06 ATAATATTGCATAA 14 V_ARID5A_03_M02736 TRANSFAC + 141649064 141649077 6.0E-06 GCAATATTATAATT 14 V_DOBOX4_01_M01359 TRANSFAC - 141649316 141649332 9.0E-06 GTTATAGATCCTCTTTT 17 Ddit3_Cebpa_MA0019.1 JASPAR - 141645403 141645414 8.0E-06 AGGTGCAATTCC 12 V_CEBPB_02_M00117 TRANSFAC - 141649057 141649070 0.0E+00 ATATTGCATAATAC 14 V_PXRRXR_02_M01153 TRANSFAC - 141645314 141645321 1.0E-05 AGAGTTCA 8 V_FOXK1_04_M02856 TRANSFAC + 141645700 141645714 2.0E-06 CCAACAATAACAAGC 15 V_HOXA1_01_M01487 TRANSFAC - 141649107 141649122 4.0E-06 CTTTGGTAATTACAAT 16 V_HOXB6_01_M01460 TRANSFAC + 141649105 141649120 5.0E-06 ACATTGTAATTACCAA 16 V_HOXB6_01_M01460 TRANSFAC - 141649107 141649122 0.0E+00 CTTTGGTAATTACAAT 16 V_PAX4_05_M01385 TRANSFAC - 141645574 141645590 5.0E-06 TAAATTAATTCATCCAA 17 V_SOX18_03_M02801 TRANSFAC + 141645177 141645192 9.0E-06 TACTTTTGTTAAAAAT 16 V_ASCL2_03_M02737 TRANSFAC - 141649352 141649368 4.0E-06 ATCAACAGCTGATCCTG 17 V_HOX13_01_M00023 TRANSFAC - 141644747 141644776 5.0E-06 TCTTAAGACACCTATTACTACTGACATCGT 30 V_AP4_Q5_M00175 TRANSFAC + 141645212 141645221 3.0E-06 ATCAGCTGTT 10 V_AP4_Q5_M00175 TRANSFAC + 141649356 141649365 3.0E-06 ATCAGCTGTT 10 V_EVI1_Q3_M02002 TRANSFAC - 141645394 141645402 8.0E-06 TATCATGTC 9 V_ATF1_04_M02842 TRANSFAC + 141645252 141645265 8.0E-06 ATATGACAAACAAG 14 V_AP1_Q2_01_M00924 TRANSFAC - 141650866 141650877 5.0E-06 TGACTCATACTA 12 V_HNF4A_02_M02868 TRANSFAC - 141650699 141650714 8.0E-06 TCCAAGAGTCCAAAAG 16 V_ELK1_01_M00007 TRANSFAC + 141644771 141644786 2.0E-06 TTAAGAGGAAGTGAGA 16 V_NEUROD_02_M01288 TRANSFAC + 141645382 141645393 6.0E-06 GTCCTGCTGTCT 12 V_ZFP105_04_M02931 TRANSFAC + 141650870 141650886 2.0E-06 ATGAGTCAATACTTCTT 17 V_DLX7_01_M01486 TRANSFAC + 141649105 141649121 2.0E-06 ACATTGTAATTACCAAA 17 V_MTF1_06_M02882 TRANSFAC - 141645366 141645379 2.0E-06 AAATATGAATAAGG 14 V_GABPBETA_Q3_M01876 TRANSFAC + 141644774 141644784 2.0E-06 AGAGGAAGTGA 11 V_CEBPA_01_M00116 TRANSFAC - 141649057 141649070 1.0E-06 ATATTGCATAATAC 14 V_HOXB8_01_M01451 TRANSFAC - 141649068 141649083 6.0E-06 TCAGGCAATTATAATA 16 V_AP1FJ_Q2_M00172 TRANSFAC - 141649091 141649101 6.0E-06 GGTGACTCCGT 11 V_GEN_INI2_B_M00313 TRANSFAC + 141645477 141645484 1.0E-05 CCTCATTT 8 V_SPIC_02_M02077 TRANSFAC + 141644774 141644783 3.0E-06 AGAGGAAGTG 10 V_ETS1_B_M00339 TRANSFAC + 141644774 141644788 2.0E-06 AGAGGAAGTGAGAGG 15 V_ETS1_B_M00339 TRANSFAC + 141644784 141644798 6.0E-06 AGAGGATGTTGTTGG 15 V_CEBPB_Q6_M01896 TRANSFAC + 141649060 141649069 0.0E+00 TTATGCAATA 10 V_OCT1_07_M00248 TRANSFAC + 141649104 141649115 6.0E-06 TACATTGTAATT 12 V_VAX1_01_M01397 TRANSFAC + 141649107 141649122 6.0E-06 ATTGTAATTACCAAAG 16 V_VDR_Q3_M00444 TRANSFAC - 141645314 141645328 9.0E-06 GAGTCAGAGAGTTCA 15 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 141645345 141645352 1.0E-05 TGTGGTTT 8 V_HOMEZ_01_M01429 TRANSFAC + 141645167 141645183 4.0E-06 AAACCATCGTTACTTTT 17 V_DR3_Q4_M00966 TRANSFAC + 141645312 141645332 3.0E-06 ACTGAACTCTCTGACTCAGTG 21 V_MOX1_01_M01443 TRANSFAC + 141649107 141649122 2.0E-06 ATTGTAATTACCAAAG 16 V_PIT1_Q6_M00802 TRANSFAC + 141645369 141645386 3.0E-06 TATTCATATTTCTGTCCT 18 V_HOXD3_01_M01338 TRANSFAC - 141649107 141649122 2.0E-06 CTTTGGTAATTACAAT 16 V_ARP1_01_M00155 TRANSFAC + 141650695 141650710 2.0E-06 TCAGCTTTTGGACTCT 16 V_TFE_Q6_M01029 TRANSFAC + 141649016 141649023 1.0E-05 TCATGTGA 8 V_CEBP_Q2_01_M00912 TRANSFAC - 141649057 141649068 1.0E-06 ATTGCATAATAC 12 V_TCF11MAFG_01_M00284 TRANSFAC + 141650865 141650886 4.0E-06 ATAGTATGAGTCAATACTTCTT 22 V_CEBPE_01_M01772 TRANSFAC + 141649059 141649068 2.0E-06 ATTATGCAAT 10 V_TCF3_05_M02920 TRANSFAC - 141645480 141645494 5.0E-06 TAGGGAAAATAAATG 15 V_CDPCR3_01_M00105 TRANSFAC - 141645146 141645160 6.0E-06 CACCAGGAGCTATGG 15 V_HOXB5_01_M01319 TRANSFAC + 141649107 141649122 2.0E-06 ATTGTAATTACCAAAG 16 V_SOX14_03_M02798 TRANSFAC - 141649065 141649080 0.0E+00 GGCAATTATAATATTG 16 V_SOX14_03_M02798 TRANSFAC - 141649103 141649118 9.0E-06 GGTAATTACAATGTAG 16 V_HOX13_02_M01452 TRANSFAC + 141649107 141649122 1.0E-06 ATTGTAATTACCAAAG 16 V_SPIB_03_M02076 TRANSFAC + 141644774 141644783 3.0E-06 AGAGGAAGTG 10 V_CEBPA_Q6_M01866 TRANSFAC + 141649057 141649069 1.0E-06 GTATTATGCAATA 13 V_HOXC8_01_M01321 TRANSFAC - 141649107 141649122 1.0E-06 CTTTGGTAATTACAAT 16 V_IPF1_06_M01438 TRANSFAC + 141649107 141649122 4.0E-06 ATTGTAATTACCAAAG 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.