Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

HYAL4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 23553 hyaluronoglucosaminidase 4 chr7 + 123480222 - 123485722 123485222 Transcription Factor Binding Sites   Download all TFBS in the HYAL4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TBX21_TBX_full_dimeric_16_1 SELEX - 123486336 123486351 3.0E-06 AGTCTGAACTCACACA 16 CTCF_MA0139.1 JASPAR + 123486181 123486199 2.0E-06 CTGCCAGGAGGTGGCACTT 19 SP8_C2H2_DBD_monomeric_12_1 SELEX - 123484869 123484880 7.0E-06 CCCACGCCCACA 12 NF-kappaB_MA0061.1 JASPAR - 123485007 123485016 4.0E-06 GGGGATTTCC 10 SP3_C2H2_DBD_monomeric_11_1 SELEX - 123484870 123484880 2.0E-06 CCCACGCCCAC 11 HSFY2_HSF_DBD_dimer-of-dimers_15_1 SELEX - 123486731 123486745 9.0E-06 TTGTAACAATTCCAA 15 NFIA_NFI_full_dimeric_15_1 SELEX + 123485198 123485212 7.0E-06 TTGGCCATCTTCCAG 15 NFIA_NFI_full_dimeric_15_1 SELEX + 123486173 123486187 1.0E-06 TTGGCCTCCTGCCAG 15 NFIA_NFI_full_dimeric_15_1 SELEX - 123486173 123486187 7.0E-06 CTGGCAGGAGGCCAA 15 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX - 123490123 123490134 7.0E-06 TAACATGTGTCA 12 SRY_HMG_DBD_dimeric_13_2 SELEX - 123490169 123490181 7.0E-06 TGTATTGCATTTA 13 EBF1_EBF_full_dimeric_14_1 SELEX + 123486838 123486851 4.0E-06 CTTCCCAGGGGACT 14 EBF1_EBF_full_dimeric_14_1 SELEX - 123486838 123486851 5.0E-06 AGTCCCCTGGGAAG 14 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 123484930 123484941 8.0E-06 GCTTTTCCCAAG 12 EWSR1-FLI1_MA0149.1 JASPAR - 123486649 123486666 0.0E+00 GGCAGGGAGGCAGGAAAG 18 NFIX_NFI_full_dimeric_15_2 SELEX - 123485198 123485212 8.0E-06 CTGGAAGATGGCCAA 15 NFIX_NFI_full_dimeric_15_2 SELEX + 123486173 123486187 9.0E-06 TTGGCCTCCTGCCAG 15 NFIX_NFI_full_dimeric_15_2 SELEX - 123486173 123486187 3.0E-06 CTGGCAGGAGGCCAA 15 NFKB1_MA0105.1 JASPAR - 123485006 123485016 1.0E-06 GGGGATTTCCC 11 ERG_ETS_full_dimeric_14_1 SELEX + 123488139 123488152 7.0E-06 ACAGGACATCCTTT 14 ERG_ETS_full_dimeric_14_1 SELEX - 123488139 123488152 7.0E-06 AAAGGATGTCCTGT 14 Pknox2_MEIS_DBD_dimeric_12_1 SELEX - 123490123 123490134 6.0E-06 TAACATGTGTCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 123490123 123490134 6.0E-06 TAACATGTGTCA 12 Sox1_HMG_DBD_dimeric_13_1 SELEX - 123490174 123490186 9.0E-06 ACAATTGTATTGC 13 NFKB2_NFAT_DBD_dimeric_13_1 SELEX + 123485005 123485017 1.0E-06 AGGGAAATCCCCC 13 NFKB2_NFAT_DBD_dimeric_13_1 SELEX - 123485005 123485017 2.0E-06 GGGGGATTTCCCT 13 REL_MA0101.1 JASPAR - 123485007 123485016 1.0E-06 GGGGATTTCC 10 REL_MA0101.1 JASPAR + 123486645 123486654 6.0E-06 GGGGCTTTCC 10 Sox17_HMG_DBD_dimeric_15_2 SELEX - 123490168 123490182 4.0E-06 TTGTATTGCATTTAT 15 Esrra_nuclearreceptor_DBD_dimeric_17_1 SELEX + 123488176 123488192 3.0E-06 AAGGTGACTAAAGGACC 17 GRHL1_CP2_DBD_dimer-of-dimers_17_1 SELEX + 123490072 123490088 5.0E-06 CACTGGATTTACCTGTT 17 RELA_MA0107.1 JASPAR - 123485007 123485016 2.0E-06 GGGGATTTCC 10 Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 123486372 123486381 6.0E-06 AGCAGCTGCC 10 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX - 123486447 123486460 4.0E-06 GCATGACACAGCAG 14 FOXI1_MA0042.1 JASPAR + 123490082 123490093 9.0E-06 ACCTGTTTGTTT 12 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX + 123486738 123486753 7.0E-06 TGTTACAAAGTTCAGC 16 CTCF_C2H2_full_monomeric_17_1 SELEX - 123486182 123486198 7.0E-06 AGTGCCACCTCCTGGCA 17 HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX + 123486738 123486752 7.0E-06 TGTTACAAAGTTCAG 15 SOX14_HMG_DBD_dimeric_12_1 SELEX - 123490175 123490186 1.0E-05 ACAATTGTATTG 12 NFKB1_NFAT_DBD_dimeric_13_1 SELEX + 123485005 123485017 4.0E-06 AGGGAAATCCCCC 13 NFKB1_NFAT_DBD_dimeric_13_1 SELEX - 123485005 123485017 4.0E-06 GGGGGATTTCCCT 13 TBX20_TBX_full_dimeric_16_1 SELEX + 123486413 123486428 6.0E-06 TGGTGTTATATTCCCA 16 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 123490169 123490186 2.0E-06 ACAATTGTATTGCATTTA 18 TGIF2LX_MEIS_full_dimeric_12_1 SELEX - 123490123 123490134 4.0E-06 TAACATGTGTCA 12 NFIB_NFI_full_dimeric_15_1 SELEX + 123485198 123485212 6.0E-06 TTGGCCATCTTCCAG 15 NFIB_NFI_full_dimeric_15_1 SELEX + 123486173 123486187 1.0E-06 TTGGCCTCCTGCCAG 15 Meis2_MEIS_DBD_dimeric_12_1 SELEX - 123490123 123490134 5.0E-06 TAACATGTGTCA 12 Sox3_HMG_DBD_dimeric_17_1 SELEX + 123490172 123490188 3.0E-06 ATGCAATACAATTGTAG 17 Sox3_HMG_DBD_dimeric_17_1 SELEX - 123490172 123490188 8.0E-06 CTACAATTGTATTGCAT 17 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 123490169 123490186 3.0E-06 ACAATTGTATTGCATTTA 18 Sox1_HMG_DBD_dimeric_15_1 SELEX - 123490173 123490187 6.0E-06 TACAATTGTATTGCA 15 FOXO6_forkhead_DBD_dimeric_14_1 SELEX + 123488114 123488127 7.0E-06 AATAACATGTTTGT 14 NFE2L2_MA0150.1 JASPAR - 123486448 123486458 1.0E-06 ATGACACAGCA 11 TGIF1_MEIS_DBD_dimeric_12_1 SELEX - 123490123 123490134 7.0E-06 TAACATGTGTCA 12 V_DMRT4_01_M01149 TRANSFAC + 123486736 123486748 3.0E-06 ATTGTTACAAAGT 13 V_NFKAPPAB65_01_M00052 TRANSFAC - 123485007 123485016 3.0E-06 GGGGATTTCC 10 V_HNF3B_01_M00131 TRANSFAC + 123486158 123486172 5.0E-06 TGCACTATTTTTGTA 15 V_NFKB_C_M00208 TRANSFAC - 123485005 123485016 8.0E-06 GGGGATTTCCCT 12 V_AP1_Q2_M00173 TRANSFAC - 123488098 123488108 1.0E-06 GGTGACTCAGT 11 V_FOXP3_Q4_M00992 TRANSFAC - 123488108 123488124 1.0E-06 AACATGTTATTACAGGG 17 V_NFKB_Q6_01_M00774 TRANSFAC + 123485001 123485016 9.0E-06 GGAAAGGGAAATCCCC 16 V_NFKB_Q6_01_M00774 TRANSFAC + 123485002 123485017 3.0E-06 GAAAGGGAAATCCCCC 16 V_APOLYA_B_M00310 TRANSFAC - 123485216 123485230 2.0E-06 AATAAAGAACTATTG 15 V_EBF_Q6_M00977 TRANSFAC - 123486840 123486850 4.0E-06 GTCCCCTGGGA 11 V_NRSF_Q4_M01028 TRANSFAC - 123488127 123488145 5.0E-06 GTCCTGTGCGTGGTTCAGA 19 V_DMRT3_01_M01148 TRANSFAC + 123486734 123486748 0.0E+00 GAATTGTTACAAAGT 15 V_DMRT3_01_M01148 TRANSFAC - 123490180 123490194 8.0E-06 CTATTGCTACAATTG 15 V_SOX30_03_M02804 TRANSFAC - 123490134 123490149 2.0E-06 AAGTAACAATGATTCT 16 V_NF1A_Q6_M02103 TRANSFAC + 123486173 123486188 5.0E-06 TTGGCCTCCTGCCAGG 16 V_BCL6_01_M01183 TRANSFAC + 123490087 123490102 4.0E-06 TTTGTTTCAAAGCTTT 16 V_COE1_Q6_M01871 TRANSFAC + 123486840 123486853 6.0E-06 TCCCAGGGGACTCA 14 V_RELBP52_01_M01239 TRANSFAC - 123485007 123485016 1.0E-06 GGGGATTTCC 10 V_RELBP52_01_M01239 TRANSFAC + 123486645 123486654 4.0E-06 GGGGCTTTCC 10 V_EOMES_03_M02747 TRANSFAC - 123486683 123486699 9.0E-06 GGGAGGGTGTGAATCTG 17 V_ZTA_Q2_M00711 TRANSFAC + 123490117 123490129 3.0E-06 TAAGTGTGACACA 13 V_CEBP_01_M00159 TRANSFAC - 123486777 123486789 1.0E-06 TATTTGGAAAAGA 13 V_GATA1_03_M00127 TRANSFAC + 123486428 123486441 4.0E-06 AGGAGGATTAGGGT 14 V_P50P50_Q3_M01223 TRANSFAC + 123485004 123485016 1.0E-06 AAGGGAAATCCCC 13 V_P50P50_Q3_M01223 TRANSFAC - 123485005 123485017 5.0E-06 GGGGGATTTCCCT 13 V_SOX11_04_M02899 TRANSFAC + 123486733 123486746 4.0E-06 GGAATTGTTACAAA 14 V_EAR2_Q2_M01728 TRANSFAC + 123486273 123486286 8.0E-06 TGCCCTTTGTCTTC 14 V_IRF3_05_M02767 TRANSFAC - 123486757 123486770 2.0E-06 GGAAAAGGAAACCT 14 V_P50RELAP65_Q5_01_M01224 TRANSFAC - 123485004 123485015 5.0E-06 GGGATTTCCCTT 12 V_PU1_Q4_M01172 TRANSFAC + 123486872 123486890 9.0E-06 TCTTGCTGCTTCCTCTATC 19 V_AP1_Q6_M00174 TRANSFAC - 123488098 123488108 2.0E-06 GGTGACTCAGT 11 V_TRF1_01_M01237 TRANSFAC + 123486429 123486443 1.0E-06 GGAGGATTAGGGTTG 15 V_SOX7_03_M02807 TRANSFAC - 123490131 123490152 4.0E-06 CTCAAGTAACAATGATTCTAAC 22 V_HNF3G_Q4_M02015 TRANSFAC + 123490085 123490092 7.0E-06 TGTTTGTT 8 V_HNF4_01_B_M00411 TRANSFAC - 123486272 123486286 7.0E-06 GAAGACAAAGGGCAT 15 V_CREL_01_M00053 TRANSFAC - 123485007 123485016 1.0E-06 GGGGATTTCC 10 V_CREL_01_M00053 TRANSFAC + 123486645 123486654 6.0E-06 GGGGCTTTCC 10 V_OLF1_01_M00261 TRANSFAC + 123486254 123486275 2.0E-06 TAGAATTCCCAAAAGTATATGC 22 V_IRX4_01_M01410 TRANSFAC + 123488113 123488129 4.0E-06 TAATAACATGTTTGTCT 17 V_NFKB_Q6_M00194 TRANSFAC - 123485004 123485017 1.0E-05 GGGGGATTTCCCTT 14 V_AP1_Q4_M00188 TRANSFAC - 123488098 123488108 1.0E-06 GGTGACTCAGT 11 V_IK1_01_M00086 TRANSFAC - 123486255 123486267 6.0E-06 TTTTGGGAATTCT 13 V_IK1_01_M00086 TRANSFAC + 123490099 123490111 9.0E-06 CTTTGGGAATTCT 13 V_PAX5_01_M00143 TRANSFAC - 123486645 123486672 2.0E-06 TCCACAGGCAGGGAGGCAGGAAAGCCCC 28 V_SOX18_03_M02801 TRANSFAC + 123490178 123490193 1.0E-05 TACAATTGTAGCAATA 16 V_ASCL2_03_M02737 TRANSFAC - 123486368 123486384 6.0E-06 CACAGCAGCTGCCACCA 17 V_ISRE_01_M00258 TRANSFAC + 123486757 123486771 3.0E-06 AGGTTTCCTTTTCCC 15 V_NFE4_Q5_M02105 TRANSFAC + 123486691 123486702 9.0E-06 CACCCTCCCCTG 12 V_IK2_01_M00087 TRANSFAC - 123486256 123486267 3.0E-06 TTTTGGGAATTC 12 V_IK2_01_M00087 TRANSFAC + 123490099 123490110 1.0E-06 CTTTGGGAATTC 12 V_NFKAPPAB50_01_M00051 TRANSFAC - 123485007 123485016 6.0E-06 GGGGATTTCC 10 V_TEL2_Q6_M00678 TRANSFAC + 123485026 123485035 8.0E-06 ACACTTCCTG 10 V_CDC5_01_M00478 TRANSFAC + 123488065 123488076 5.0E-06 GATTTAATGCAA 12 V_SRF_Q5_02_M01007 TRANSFAC + 123485187 123485205 9.0E-06 GCTGTTCCTATTTGGCCAT 19 V_SMAD4_Q6_M00733 TRANSFAC - 123488122 123488136 2.0E-06 GTGGTTCAGACAAAC 15 V_CTCF_02_M01259 TRANSFAC + 123486178 123486197 0.0E+00 CTCCTGCCAGGAGGTGGCAC 20 V_IRX3_01_M01318 TRANSFAC + 123488113 123488129 7.0E-06 TAATAACATGTTTGTCT 17 V_IK3_01_M00088 TRANSFAC - 123486255 123486267 3.0E-06 TTTTGGGAATTCT 13 V_IK3_01_M00088 TRANSFAC - 123486419 123486431 9.0E-06 TCCTGGGAATATA 13 V_CTCF_01_M01200 TRANSFAC + 123486180 123486199 2.0E-06 CCTGCCAGGAGGTGGCACTT 20 V_IRX5_01_M01472 TRANSFAC + 123488113 123488129 2.0E-06 TAATAACATGTTTGTCT 17 V_MAF_Q6_01_M00983 TRANSFAC + 123486448 123486458 4.0E-06 TGCTGTGTCAT 11 V_IRF7_01_M00453 TRANSFAC + 123484999 123485016 4.0E-06 TAGGAAAGGGAAATCCCC 18 V_NEUROD_02_M01288 TRANSFAC - 123488189 123488200 9.0E-06 TTGCTGCTGGTC 12 V_IRX3_02_M01485 TRANSFAC + 123488113 123488129 4.0E-06 TAATAACATGTTTGTCT 17 V_SOX15_03_M02799 TRANSFAC - 123490153 123490169 8.0E-06 ATCAGTACAATAAGTAT 17 V_LEF1_Q2_01_M01022 TRANSFAC - 123486195 123486204 8.0E-06 CTTCAAAGTG 10 V_AP4_01_M00005 TRANSFAC - 123485178 123485195 1.0E-06 AGGAACAGCTCCAGTCTG 18 V_AP1FJ_Q2_M00172 TRANSFAC - 123488098 123488108 0.0E+00 GGTGACTCAGT 11 V_NRF2_Q4_M00821 TRANSFAC + 123486447 123486459 0.0E+00 CTGCTGTGTCATG 13 V_P53_04_M01652 TRANSFAC + 123486321 123486340 3.0E-06 GGGCAGGGCTAGGCATGTGT 20 V_P53_04_M01652 TRANSFAC - 123486321 123486340 6.0E-06 ACACATGCCTAGCCCTGCCC 20 V_ZABC1_01_M01306 TRANSFAC - 123486730 123486737 1.0E-05 ATTCCAAC 8 V_IRX2_01_M01405 TRANSFAC + 123488113 123488129 2.0E-06 TAATAACATGTTTGTCT 17 V_SOX8_03_M02808 TRANSFAC + 123485212 123485228 7.0E-06 GTTTCAATAGTTCTTTA 17 V_NFKAPPAB_01_M00054 TRANSFAC - 123485007 123485016 4.0E-06 GGGGATTTCC 10 V_EWSR1FLI1_01_M02252 TRANSFAC - 123486649 123486666 0.0E+00 GGCAGGGAGGCAGGAAAG 18 V_FOXJ2_01_M00422 TRANSFAC - 123490080 123490097 9.0E-06 TTTGAAACAAACAGGTAA 18 V_SOX12_03_M02796 TRANSFAC + 123490157 123490170 1.0E-05 TTATTGTACTGATA 14 V_CTF1_01_M01196 TRANSFAC - 123486173 123486186 0.0E+00 TGGCAGGAGGCCAA 14 V_NFE2L2_01_M02263 TRANSFAC - 123486448 123486458 1.0E-06 ATGACACAGCA 11 V_MAFK_04_M02880 TRANSFAC - 123486155 123486169 2.0E-06 AAAAATAGTGCATTA 15 V_SOX5_07_M02909 TRANSFAC + 123486730 123486746 0.0E+00 GTTGGAATTGTTACAAA 17 V_GFI1_Q6_01_M02010 TRANSFAC + 123488163 123488172 4.0E-06 CTCTGATTTG 10 V_TCF11MAFG_01_M00284 TRANSFAC - 123486442 123486463 9.0E-06 CCTGCATGACACAGCAGAGGCA 22 V_IRXB3_01_M01377 TRANSFAC + 123488113 123488129 2.0E-06 TAATAACATGTTTGTCT 17 V_TCF3_05_M02920 TRANSFAC - 123486165 123486179 5.0E-06 AGGCCAATACAAAAA 15 V_TCF3_05_M02920 TRANSFAC - 123490215 123490229 8.0E-06 AGGCTGAAATAAATC 8 TLX1_NFIC_MA0119.1 JASPAR - 123486173 123486186 0.0E+00 TGGCAGGAGGCCAA 14 V_DMRT1_01_M01146 TRANSFAC - 123490018 123490032 9.0E-06 ATGCTACTATGTAAG 15 V_BRCA_01_M01082 TRANSFAC + 123486726 123486733 1.0E-05 TTCTGTTG 8 V_AR_Q2_M00447 TRANSFAC + 123490152 123490166 4.0E-06 GATACTTATTGTACT 15 V_DMRT5_01_M01150 TRANSFAC + 123486735 123486749 3.0E-06 AATTGTTACAAAGTT 15 V_DMRT5_01_M01150 TRANSFAC - 123490179 123490193 8.0E-06 TATTGCTACAATTGT 15 V_NF1_Q6_M00193 TRANSFAC - 123486172 123486189 8.0E-06 TCCTGGCAGGAGGCCAAT 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.