Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SEC14L2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 23541 SEC14-like 2 (S. cerevisiae) chr22 + 30787929 - 30793429 30792929 Transcription Factor Binding Sites   Download all TFBS in the SEC14L2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints MEF2D_MADS_DBD_dimeric_12_1 SELEX + 30795339 30795350 2.0E-06 ACTAAAAATACA 12 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 30795348 30795359 7.0E-06 ACAAAAAATAGC 12 TBX5_TBX_DBD_dimeric_20_1 SELEX + 30796394 30796413 1.0E-06 TGGTGTTGAAATGCACACAT 20 TBX5_TBX_DBD_dimeric_20_1 SELEX - 30796394 30796413 7.0E-06 ATGTGTGCATTTCAACACCA 20 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX + 30793130 30793140 5.0E-06 AGCCCCAGGCA 11 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 30795339 30795350 6.0E-06 ACTAAAAATACA 12 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX + 30793130 30793140 6.0E-06 AGCCCCAGGCA 11 Pax4_MA0068.1 JASPAR - 30788754 30788783 9.0E-06 AAACAAAATCCTCTCCCCACCCCACTTCCC 30 Pax4_MA0068.1 JASPAR - 30788759 30788788 2.0E-06 CAAAGAAACAAAATCCTCTCCCCACCCCAC 30 ZNF238_C2H2_full_monomeric_13_1 SELEX - 30795042 30795054 7.0E-06 CAGGCAGATGTGT 13 ZNF524_C2H2_full_dimeric_12_1 SELEX - 30788742 30788753 1.0E-06 ACACTCGAACCC 12 MEF2B_MADS_full_dimeric_12_1 SELEX + 30795339 30795350 3.0E-06 ACTAAAAATACA 12 SP4_C2H2_full_monomeric_17_1 SELEX - 30792957 30792973 8.0E-06 CAAGCCCCGCCTCTTAA 17 ZBTB49_C2H2_DBD_monomeric_17_1 SELEX + 30793540 30793556 5.0E-06 TTCTTCTTGTAGGGTCA 17 INSM1_MA0155.1 JASPAR - 30795138 30795149 1.0E-06 TGTCAGGGGGTG 12 TBX2_TBX_full_dimeric_18_1 SELEX + 30796395 30796412 4.0E-06 GGTGTTGAAATGCACACA 18 FEV_MA0156.1 JASPAR + 30794968 30794975 1.0E-05 CAGGAAAT 8 TFAP2C_TFAP_full_dimeric_11_1 SELEX + 30793130 30793140 6.0E-06 AGCCCCAGGCA 11 Myf_MA0055.1 JASPAR + 30788668 30788679 9.0E-06 AGACAACTGGAG 12 ZNF524_C2H2_full_monomeric_14_1 SELEX - 30788737 30788750 5.0E-06 CTCGAACCCCTGAT 14 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 30793130 30793140 6.0E-06 AGCCCCAGGCA 11 V_TGIF_01_M00418 TRANSFAC - 30794984 30794994 3.0E-06 AGCTGTCAGTT 11 V_TCF3_01_M01594 TRANSFAC - 30795342 30795354 3.0E-06 TTTTTGTATTTTT 13 V_HSF1_Q6_M01023 TRANSFAC + 30789112 30789128 2.0E-06 TTTCCAGAGAGTTCGCG 17 V_ZFX_01_M01593 TRANSFAC - 30792981 30792996 7.0E-06 GCCCGGGCCGCGGAGC 16 V_ETS_B_M00340 TRANSFAC + 30794966 30794979 0.0E+00 GACAGGAAATGCTT 14 V_EVI1_02_M00079 TRANSFAC + 30795145 30795155 5.0E-06 TGACAAGACAG 11 V_SP1_02_M01303 TRANSFAC + 30788761 30788771 5.0E-06 GGGGTGGGGAG 11 V_TCFAP2E_04_M02926 TRANSFAC + 30795344 30795357 4.0E-06 AAATACAAAAAATA 14 V_HELIOSA_01_M01003 TRANSFAC + 30788695 30788705 4.0E-06 CTTAGGGATTA 11 V_MEF2A_Q6_M02024 TRANSFAC - 30795339 30795348 4.0E-06 TATTTTTAGT 10 V_RPC155_01_M01798 TRANSFAC + 30788738 30788753 8.0E-06 TCAGGGGTTCGAGTGT 16 V_ETS_Q4_M00771 TRANSFAC - 30794968 30794979 4.0E-06 AAGCATTTCCTG 12 V_GC_01_M00255 TRANSFAC + 30792959 30792972 0.0E+00 AAGAGGCGGGGCTT 14 V_MYF_01_M01302 TRANSFAC + 30788668 30788679 9.0E-06 AGACAACTGGAG 12 V_TGIF_02_M01346 TRANSFAC + 30794982 30794998 4.0E-06 TAAACTGACAGCTTTTA 17 V_POLY_C_M00212 TRANSFAC - 30792999 30793016 8.0E-06 GAGTAAAGTCCCAGCCTT 18 V_RSRFC4_Q2_M00407 TRANSFAC + 30795337 30795353 1.0E-05 CTACTAAAAATACAAAA 17 V_RSRFC4_Q2_M00407 TRANSFAC + 30795346 30795362 7.0E-06 ATACAAAAAATAGCCAG 17 V_REST_01_M01256 TRANSFAC - 30793571 30793592 9.0E-06 CCAAGGAGCTATCCAGAGCCCT 22 V_IRF3_06_M02871 TRANSFAC + 30795411 30795424 1.0E-06 GGAGAATGGTGTGA 14 V_SOX12_04_M02900 TRANSFAC + 30795342 30795357 9.0E-06 AAAAATACAAAAAATA 16 V_MEF2_04_M00233 TRANSFAC + 30795333 30795354 7.0E-06 GTCTCTACTAAAAATACAAAAA 22 V_MEF2_04_M00233 TRANSFAC + 30795342 30795363 8.0E-06 AAAAATACAAAAAATAGCCAGG 22 V_TGIF1_01_M03111 TRANSFAC + 30794982 30794998 4.0E-06 TAAACTGACAGCTTTTA 17 V_INSM1_01_M02268 TRANSFAC - 30795138 30795149 1.0E-06 TGTCAGGGGGTG 12 V_MAF_Q6_01_M00983 TRANSFAC + 30795401 30795411 6.0E-06 GGCTGAGTCAG 11 V_CIZ_01_M00734 TRANSFAC + 30795349 30795357 6.0E-06 CAAAAAATA 9 V_MTF1_06_M02882 TRANSFAC + 30795344 30795357 0.0E+00 AAATACAAAAAATA 14 V_GABPBETA_Q3_M01876 TRANSFAC + 30794967 30794977 7.0E-06 ACAGGAAATGC 11 V_LUN1_01_M00480 TRANSFAC + 30795385 30795401 3.0E-06 TCCCAGCTACTTGGGAG 17 V_NKX22_01_M00485 TRANSFAC + 30793408 30793417 8.0E-06 ACAAGTGGTT 10 V_NRF2_Q4_M00821 TRANSFAC + 30795400 30795412 5.0E-06 AGGCTGAGTCAGG 13 V_ASCL2_04_M02841 TRANSFAC - 30788758 30788773 1.0E-06 CTCTCCCCACCCCACT 16 V_ETS1_B_M00339 TRANSFAC + 30794967 30794981 0.0E+00 ACAGGAAATGCTTGG 15 V_NFE2_Q6_M02104 TRANSFAC - 30795397 30795412 8.0E-06 CCTGACTCAGCCTCCC 16 V_SOX1_03_M02802 TRANSFAC + 30795341 30795356 7.0E-06 TAAAAATACAAAAAAT 16 V_UF1H3BETA_Q6_M01068 TRANSFAC + 30795084 30795097 4.0E-06 TGTGGGGCAGGGGC 14 V_FEV_01_M02269 TRANSFAC + 30794968 30794975 1.0E-05 CAGGAAAT 8 V_PAX4_04_M00380 TRANSFAC - 30788756 30788785 9.0E-06 AGAAACAAAATCCTCTCCCCACCCCACTTC 30 V_AP2_Q3_M00800 TRANSFAC + 30793130 30793145 7.0E-06 AGCCCCAGGCAGAAGG 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.