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TTC9 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 23508 tetratricopeptide repeat domain 9 chr14 + 71103503 - 71109003 71108503 Transcription Factor Binding Sites   Download all TFBS in the TTC9 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 71110398 71110415 6.0E-06 AAAATAAATACTGGCAAT 18 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 71110395 71110407 1.0E-06 GTAAAAATAAATA 13 MESP1_bHLH_DBD_dimeric_10_1 SELEX - 71107961 71107970 1.0E-06 AACACCTGTT 10 MYF6_bHLH_full_dimeric_10_1 SELEX + 71107961 71107970 5.0E-06 AACAGGTGTT 10 MYF6_bHLH_full_dimeric_10_1 SELEX - 71107961 71107970 5.0E-06 AACACCTGTT 10 SOX10_HMG_full_dimeric_15_3 SELEX - 71107982 71107996 1.0E-06 ATGAATCACAGACAT 15 ZBTB7A_C2H2_DBD_monomeric_12_1 SELEX + 71108091 71108102 1.0E-05 GGCGACCACACA 12 SPIC_ETS_full_monomeric_14_1 SELEX + 71109555 71109568 1.0E-06 AAAATGCGGAAGCA 14 SRY_HMG_DBD_dimeric_15_1 SELEX - 71113306 71113320 8.0E-06 TCCAATGCCATGGTT 15 NHLH1_MA0048.1 JASPAR - 71108000 71108011 8.0E-06 GCGCAGCTGTGC 12 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 71110398 71110409 9.0E-06 AAAATAAATACT 12 NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX - 71113360 71113372 7.0E-06 CCAAGGTCACAAG 13 FOXL1_forkhead_full_dimeric_13_1 SELEX + 71110396 71110408 2.0E-06 TAAAAATAAATAC 13 SOX9_HMG_full_dimeric_17_3 SELEX - 71107981 71107997 1.0E-06 GATGAATCACAGACATC 17 EWSR1-FLI1_MA0149.1 JASPAR + 71107864 71107881 0.0E+00 CAAAAGAAGGAAGGAATG 18 GLI2_C2H2_DBD_monomeric_14_1 SELEX + 71108094 71108107 1.0E-06 GACCACACACACCG 14 Esrrb_MA0141.1 JASPAR - 71113364 71113375 5.0E-06 TATCCAAGGTCA 12 Pknox2_MEIS_DBD_dimeric_12_1 SELEX + 71107840 71107851 7.0E-06 AGACAGCTGACA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 71107840 71107851 6.0E-06 AGACAGCTGACA 12 SPIB_ETS_DBD_monomeric_14_1 SELEX + 71109555 71109568 1.0E-06 AAAATGCGGAAGCA 14 TEAD1_TEA_full_monomeric_10_1 SELEX - 71113126 71113135 8.0E-06 AACATTCCAA 10 Meis3_MEIS_DBD_dimeric_12_1 SELEX + 71107840 71107851 8.0E-06 AGACAGCTGACA 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 71107840 71107851 9.0E-06 TGTCAGCTGTCT 12 Sox17_HMG_DBD_dimeric_15_2 SELEX - 71107982 71107996 1.0E-06 ATGAATCACAGACAT 15 Esrra_nuclearreceptor_DBD_dimeric_17_1 SELEX - 71113364 71113380 1.0E-06 GGGCTTATCCAAGGTCA 17 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 71110397 71110407 2.0E-06 AAAAATAAATA 11 TCF4_bHLH_full_dimeric_10_1 SELEX - 71107961 71107970 2.0E-06 AACACCTGTT 10 FIGLA_bHLH_DBD_dimeric_10_1 SELEX - 71107961 71107970 1.0E-06 AACACCTGTT 10 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX + 71113297 71113310 5.0E-06 AAATCAACAAACCA 14 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 71113144 71113159 9.0E-06 TGCCCTTCAAAGGGTT 16 SP1_MA0079.2 JASPAR + 71108359 71108368 3.0E-06 CCCCTCCCCC 10 Tcf21_bHLH_DBD_dimeric_14_1 SELEX + 71107959 71107972 8.0E-06 GTAACAGGTGTTCT 14 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 71110397 71110407 1.0E-06 AAAAATAAATA 11 SCRT1_C2H2_DBD_monomeric_15_1 SELEX + 71107957 71107971 8.0E-06 CAGTAACAGGTGTTC 15 Foxd3_MA0041.1 JASPAR - 71113297 71113308 2.0E-06 GTTTGTTGATTT 12 INSM1_MA0155.1 JASPAR - 71108151 71108162 5.0E-06 TTTAAGGGGGCA 12 TEAD3_TEA_DBD_monomeric_8_1 SELEX - 71113127 71113134 1.0E-05 ACATTCCA 8 Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX - 71113363 71113373 7.0E-06 TCCAAGGTCAC 11 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX - 71113362 71113372 6.0E-06 CCAAGGTCACA 11 Meis2_MEIS_DBD_dimeric_12_1 SELEX + 71107840 71107851 6.0E-06 AGACAGCTGACA 12 GLI2_C2H2_DBD_monomeric_12_1 SELEX + 71108092 71108103 5.0E-06 GCGACCACACAC 12 Sox3_HMG_DBD_dimeric_17_3 SELEX - 71107981 71107997 9.0E-06 GATGAATCACAGACATC 17 MEIS2_MEIS_DBD_dimeric_14_1 SELEX + 71107839 71107852 2.0E-06 TAGACAGCTGACAC 14 VDR_nuclearreceptor_full_dimeric_16_1 SELEX + 71107775 71107790 1.0E-05 GAGTTTCTTGAGGTCA 16 TEAD4_TEA_DBD_monomeric_10_1 SELEX - 71113126 71113135 8.0E-06 AACATTCCAA 10 SPI1_ETS_full_monomeric_14_1 SELEX + 71109555 71109568 1.0E-06 AAAATGCGGAAGCA 14 SNAI2_C2H2_DBD_monomeric_9_1 SELEX + 71107961 71107969 3.0E-06 AACAGGTGT 9 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 71110395 71110407 1.0E-06 GTAAAAATAAATA 13 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 71113297 71113309 6.0E-06 AAATCAACAAACC 13 MSC_bHLH_full_dimeric_10_1 SELEX - 71107961 71107970 2.0E-06 AACACCTGTT 10 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 71110395 71110407 1.0E-06 GTAAAAATAAATA 13 TGIF1_MEIS_DBD_dimeric_12_1 SELEX + 71107840 71107851 8.0E-06 AGACAGCTGACA 12 RORA_2_MA0072.1 JASPAR - 71107949 71107962 1.0E-05 TTACTGTGGGTCAT 14 ONECUT3_CUT_DBD_monomeric_14_1 SELEX + 71110396 71110409 5.0E-06 TAAAAATAAATACT 14 TCF3_bHLH_DBD_dimeric_10_1 SELEX - 71107961 71107970 1.0E-06 AACACCTGTT 10 V_SPI1_01_M01203 TRANSFAC + 71109555 71109571 0.0E+00 AAAATGCGGAAGCAGCG 17 V_FREAC7_01_M00293 TRANSFAC + 71110396 71110411 4.0E-06 TAAAAATAAATACTGG 16 V_MYOD_Q6_M00184 TRANSFAC - 71107961 71107970 9.0E-06 AACACCTGTT 10 V_EBF_Q6_M00977 TRANSFAC - 71109625 71109635 3.0E-06 CTCCCTTGGGA 11 V_XFD1_01_M00267 TRANSFAC + 71110398 71110411 3.0E-06 AAAATAAATACTGG 14 V_FOXD3_01_M00130 TRANSFAC - 71113297 71113308 5.0E-06 GTTTGTTGATTT 12 V_LRH1_Q5_01_M02098 TRANSFAC - 71113364 71113374 7.0E-06 ATCCAAGGTCA 11 V_SATB1_Q3_M01723 TRANSFAC + 71110401 71110416 9.0E-06 ATAAATACTGGCAATT 16 V_MEF2_02_M00231 TRANSFAC + 71110388 71110409 3.0E-06 TGGGGGAGTAAAAATAAATACT 22 V_CEBP_C_M00201 TRANSFAC + 71113499 71113516 5.0E-06 GGGATGTGGCAAGGCCTA 5 V_FOXO3A_Q1_M01137 TRANSFAC + 71110396 71110407 1.0E-06 TAAAAATAAATA 12 V_IRF3_05_M02767 TRANSFAC + 71107914 71107927 1.0E-06 GTAAATGGAAACTA 14 V_SP1_03_M02281 TRANSFAC + 71108359 71108368 3.0E-06 CCCCTCCCCC 10 V_HFH4_01_M00742 TRANSFAC - 71110398 71110410 7.0E-06 CAGTATTTATTTT 13 V_AP4_Q6_02_M01860 TRANSFAC + 71108002 71108014 5.0E-06 ACAGCTGCGCGCA 13 V_GM497_04_M02864 TRANSFAC + 71108300 71108315 1.0E-05 GCACGCACACACACAC 16 V_GM497_04_M02864 TRANSFAC + 71108312 71108327 4.0E-06 ACACACACACACGCAC 16 V_GM497_04_M02864 TRANSFAC + 71108320 71108335 5.0E-06 ACACGCACACACACAC 16 V_GM497_04_M02864 TRANSFAC + 71108326 71108341 7.0E-06 ACACACACACACTCCC 16 V_CEBPB_01_M00109 TRANSFAC + 71108243 71108256 7.0E-06 TAGTTAAGAAATCT 14 V_NKX62_Q2_M00489 TRANSFAC + 71110398 71110409 1.0E-06 AAAATAAATACT 12 V_LXRB_RXRA_Q5_M02021 TRANSFAC + 71107783 71107797 3.0E-06 TGAGGTCAGGGGAGT 15 V_RPC155_01_M01798 TRANSFAC + 71109017 71109032 6.0E-06 GCACGAGTTCAAAAGC 16 RXRA_VDR_MA0074.1 JASPAR - 71113355 71113369 6.0E-06 AGGTCACAAGGTATC 15 V_GC_01_M00255 TRANSFAC - 71108145 71108158 5.0E-06 AGGGGGCAGGGCCT 14 V_CEBPE_Q6_M01868 TRANSFAC - 71108245 71108258 2.0E-06 ATAGATTTCTTAAC 14 V_CEBPD_Q6_M00621 TRANSFAC - 71108244 71108255 9.0E-06 GATTTCTTAACT 12 V_RSRFC4_Q2_M00407 TRANSFAC + 71110392 71110408 5.0E-06 GGAGTAAAAATAAATAC 17 V_OLF1_01_M00261 TRANSFAC - 71109184 71109205 9.0E-06 CTCTGCTCCTCCGAGAGGCGGC 22 V_OLF1_01_M00261 TRANSFAC + 71113108 71113129 4.0E-06 CAGGACTCCCCTGGGGCCTTGG 22 V_TBX5_02_M01020 TRANSFAC - 71108169 71108178 0.0E+00 TAAGGTGTTA 10 V_E47_02_M00071 TRANSFAC + 71107958 71107973 0.0E+00 AGTAACAGGTGTTCTC 16 V_MAZ_Q6_01_M02023 TRANSFAC - 71107661 71107674 1.0E-05 TGAGGGGGGGAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 71108355 71108368 3.0E-06 GGGGGAGGGGGGTA 14 V_HNF3_Q6_M00791 TRANSFAC + 71110397 71110409 2.0E-06 AAAAATAAATACT 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 71110397 71110407 1.0E-06 TATTTATTTTT 11 V_EVI1_Q3_M02002 TRANSFAC - 71109054 71109062 6.0E-06 TTTCTTGTC 9 V_MEF2_04_M00233 TRANSFAC + 71110388 71110409 1.0E-06 TGGGGGAGTAAAAATAAATACT 22 V_SPIB_01_M01204 TRANSFAC + 71109555 71109571 3.0E-06 AAAATGCGGAAGCAGCG 17 V_CDC5_01_M00478 TRANSFAC + 71110393 71110404 9.0E-06 GAGTAAAAATAA 12 V_TBX5_01_M01019 TRANSFAC - 71108167 71108178 5.0E-06 TAAGGTGTTAGT 12 V_INSM1_01_M02268 TRANSFAC - 71108151 71108162 5.0E-06 TTTAAGGGGGCA 12 V_SF1_Q6_01_M01132 TRANSFAC + 71113364 71113372 7.0E-06 TGACCTTGG 9 V_PTF1BETA_Q6_M00657 TRANSFAC - 71109927 71109940 4.0E-06 GAGAAACGGGCAGG 14 V_GCNF_01_M00526 TRANSFAC - 71113089 71113106 3.0E-06 GTCTTGTTCAATGTCAAG 18 V_MYOD_Q6_02_M02100 TRANSFAC - 71107840 71107848 8.0E-06 CAGCTGTCT 9 V_TAL1_01_M01591 TRANSFAC + 71109814 71109826 0.0E+00 CTTTCTTCTCTCT 13 V_FOXL1_04_M02753 TRANSFAC + 71110396 71110412 4.0E-06 TAAAAATAAATACTGGC 17 V_FOXL1_04_M02753 TRANSFAC - 71113435 71113451 5.0E-06 GTAAGATCAACAAAAAT 17 NR1H2_RXRA_MA0115.1 JASPAR + 71109020 71109036 8.0E-06 CGAGTTCAAAAGCCAAG 17 V_ERR2_01_M01589 TRANSFAC - 71113361 71113372 8.0E-06 CCAAGGTCACAA 12 V_TFIIA_Q6_M00707 TRANSFAC - 71108371 71108382 5.0E-06 TCTGAAAGGAGG 12 V_ZFP206_01_M01742 TRANSFAC + 71108204 71108214 8.0E-06 TGCGCCTGCGC 11 V_TCF4_Q5_M00671 TRANSFAC + 71113147 71113154 1.0E-05 CCTTTGAA 8 V_FOX_Q2_M00809 TRANSFAC - 71110398 71110410 2.0E-06 CAGTATTTATTTT 13 V_RSRFC4_01_M00026 TRANSFAC - 71110392 71110407 9.0E-06 TATTTATTTTTACTCC 16 V_T3RBETA_Q6_01_M02119 TRANSFAC + 71107775 71107791 7.0E-06 GAGTTTCTTGAGGTCAG 17 V_ESRRA_03_M02748 TRANSFAC - 71113359 71113375 1.0E-06 TATCCAAGGTCACAAGG 17 V_ZFP281_01_M01597 TRANSFAC - 71108359 71108369 2.0E-06 GGGGGGAGGGG 11 V_OSR1_04_M02888 TRANSFAC - 71109655 71109670 3.0E-06 TCATGCTACCTAAGGA 16 V_RARA_03_M02787 TRANSFAC - 71113360 71113375 6.0E-06 TATCCAAGGTCACAAG 16 V_LXRA_RXRA_Q3_M00647 TRANSFAC + 71107781 71107795 6.0E-06 CTTGAGGTCAGGGGA 15 V_MYF6_03_M02781 TRANSFAC + 71107957 71107972 2.0E-06 CAGTAACAGGTGTTCT 16 V_ZFP281_04_M02831 TRANSFAC + 71107659 71107673 4.0E-06 CTCCCTCCCCCCCTC 15 V_ZFP281_04_M02831 TRANSFAC + 71108357 71108371 3.0E-06 CCCCCCTCCCCCCAC 15 V_ZFP281_04_M02831 TRANSFAC + 71108358 71108372 3.0E-06 CCCCCTCCCCCCACC 15 V_EWSR1FLI1_01_M02252 TRANSFAC + 71107864 71107881 0.0E+00 CAAAAGAAGGAAGGAATG 18 V_FOXJ2_01_M00422 TRANSFAC + 71110395 71110412 1.0E-05 GTAAAAATAAATACTGGC 18 V_FREAC4_01_M00292 TRANSFAC - 71113436 71113451 6.0E-06 GTAAGATCAACAAAAA 16 V_HNF4_01_M00134 TRANSFAC + 71109019 71109037 4.0E-06 ACGAGTTCAAAAGCCAAGG 19 V_P300_01_M00033 TRANSFAC - 71108331 71108344 1.0E-06 AAGGGGAGTGTGTG 14 V_FOXK1_03_M02752 TRANSFAC - 71113435 71113451 3.0E-06 GTAAGATCAACAAAAAT 17 V_VDRRXR_01_M01202 TRANSFAC - 71113355 71113369 6.0E-06 AGGTCACAAGGTATC 15 V_T3RALPHA_Q6_M01724 TRANSFAC + 71107781 71107791 1.0E-06 CTTGAGGTCAG 11

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.