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PHF3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 23469 PHD finger protein 3 chr6 + 64351430 - 64356930 64356430 Transcription Factor Binding Sites   Download all TFBS in the PHF3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 64359461 64359473 3.0E-06 GTCAACAACAAAA 13 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 64359785 64359797 0.0E+00 GTATATATAAACA 13 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 64355086 64355102 8.0E-06 CTCTTTAAAAACAATTT 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 64359953 64359969 7.0E-06 GAAATGGATTGTAAACA 17 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 64359385 64359396 2.0E-06 GCTAAAATTAGC 12 RFX4_RFX_DBD_dimeric_16_1 SELEX + 64354001 64354016 0.0E+00 TGTTGCTATGGTAACA 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 64354001 64354016 0.0E+00 TGTTACCATAGCAACA 16 SOX8_HMG_full_dimeric_17_1 SELEX - 64359818 64359834 6.0E-06 ACACCATTTCAGTGATT 17 GATA5_GATA_DBD_monomeric_8_1 SELEX - 64360107 64360114 7.0E-06 AGATAAGA 8 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 64359385 64359396 2.0E-06 GCTAAAATTAGC 12 GATA4_GATA_DBD_monomeric_8_1 SELEX - 64360107 64360114 7.0E-06 AGATAAGA 8 MEF2B_MADS_full_dimeric_12_1 SELEX + 64359385 64359396 1.0E-06 GCTAAAATTAGC 12 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 64354001 64354016 0.0E+00 TGTTGCTATGGTAACA 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 64354001 64354016 0.0E+00 TGTTACCATAGCAACA 16 MEF2A_MA0052.1 JASPAR - 64359386 64359395 6.0E-06 CTAATTTTAG 10 Gfi_MA0038.1 JASPAR + 64359816 64359825 3.0E-06 AAAATCACTG 10 SRY_MA0084.1 JASPAR - 64360044 64360052 7.0E-06 TAAAACAAT 9 Gata1_MA0035.2 JASPAR - 64360106 64360116 3.0E-06 GCAGATAAGAG 11 GATA3_GATA_full_monomeric_8_1 SELEX - 64360107 64360114 7.0E-06 AGATAAGA 8 RFX2_RFX_DBD_dimeric_16_1 SELEX + 64354001 64354016 0.0E+00 TGTTGCTATGGTAACA 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 64354001 64354016 0.0E+00 TGTTACCATAGCAACA 16 NKX2-3_homeodomain_full_monomeric_10_1 SELEX + 64359796 64359805 4.0E-06 ACCACTTGAG 10 RFX5_RFX_DBD_dimeric_16_3 SELEX + 64354001 64354016 0.0E+00 TGTTGCTATGGTAACA 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 64354001 64354016 0.0E+00 TGTTACCATAGCAACA 16 HOXA13_homeodomain_full_monomeric_11_1 SELEX - 64360024 64360034 1.0E-05 TATTGTAAAAA 11 ZNF410_C2H2_DBD_monomeric_17_1 SELEX - 64359968 64359984 6.0E-06 AATATACCATATTAAGA 17 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 64359785 64359797 6.0E-06 GTATATATAAACA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 64359458 64359470 3.0E-06 AACAACAAAAATA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 64359461 64359473 5.0E-06 GTCAACAACAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 64359785 64359797 3.0E-06 GTATATATAAACA 13 SOX9_HMG_full_dimeric_17_1 SELEX - 64359818 64359834 6.0E-06 ACACCATTTCAGTGATT 17 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 64359460 64359473 1.0E-06 GTCAACAACAAAAA 14 V_DMRT4_01_M01149 TRANSFAC - 64359405 64359417 2.0E-06 GATGTAGCAATTA 13 V_NFAT_Q4_01_M00935 TRANSFAC - 64353357 64353366 7.0E-06 AAGGAAAATT 10 V_FOXP1_01_M00987 TRANSFAC - 64359388 64359407 4.0E-06 TTATTTTGGTAGCTAATTTT 20 V_OSR1_03_M02784 TRANSFAC - 64360111 64360126 2.0E-06 ACCTACAGTAGCAGAT 16 V_TGIF_01_M00418 TRANSFAC - 64359910 64359920 8.0E-06 AGCTGTCAATG 11 V_MEIS1_02_M01419 TRANSFAC - 64359909 64359924 7.0E-06 GCTTAGCTGTCAATGT 16 V_GATA1_Q6_M02004 TRANSFAC - 64360105 64360119 0.0E+00 GTAGCAGATAAGAGT 15 V_XFD1_01_M00267 TRANSFAC - 64359949 64359962 8.0E-06 ATTGTAAACACAAG 14 V_MAFK_03_M02776 TRANSFAC + 64353333 64353347 8.0E-06 AAATTATTCTGACTC 15 V_HMGIY_Q3_M01010 TRANSFAC + 64354017 64354031 8.0E-06 AGTGCATTTACTTTT 15 V_MMEF2_Q6_M00405 TRANSFAC - 64355087 64355102 1.0E-06 CTCTTTAAAAACAATT 16 V_MMEF2_Q6_M00405 TRANSFAC + 64359784 64359799 1.0E-06 CTGTTTATATATACCA 16 V_FOXJ1_04_M02854 TRANSFAC - 64359422 64359436 6.0E-06 TCATCATAACAGAAA 15 V_MEF2_02_M00231 TRANSFAC + 64359379 64359400 1.0E-06 CTTAGTGCTAAAATTAGCTACC 22 V_ZTA_Q2_M00711 TRANSFAC + 64353336 64353348 3.0E-06 TTATTCTGACTCA 13 V_NKX25_Q6_M02108 TRANSFAC + 64353924 64353934 2.0E-06 ATCACTTGAAA 11 V_FOXO3A_Q1_M01137 TRANSFAC - 64355086 64355097 2.0E-06 TAAAAACAATTT 12 V_SOX11_04_M02899 TRANSFAC + 64353332 64353345 5.0E-06 AAAATTATTCTGAC 14 V_SOX11_04_M02899 TRANSFAC - 64353349 64353362 0.0E+00 AAAATTGTTATAAA 14 V_SOX11_04_M02899 TRANSFAC + 64355085 64355098 0.0E+00 AAAATTGTTTTTAA 14 V_RFX4_03_M02789 TRANSFAC - 64353999 64354013 1.0E-06 TACCATAGCAACATG 15 V_FOXJ1_03_M02750 TRANSFAC - 64359947 64359962 0.0E+00 ATTGTAAACACAAGAT 16 V_HFH4_01_M00742 TRANSFAC - 64359883 64359895 3.0E-06 ATTTGTTTGTAAA 13 V_DLX2_01_M01468 TRANSFAC + 64359401 64359416 1.0E-06 AAAATAATTGCTACAT 16 V_HOXC6_01_M01406 TRANSFAC + 64359400 64359416 6.0E-06 CAAAATAATTGCTACAT 17 V_SOX21_03_M02803 TRANSFAC + 64353348 64353363 7.0E-06 ATTTATAACAATTTTC 16 V_SOX21_03_M02803 TRANSFAC - 64353348 64353363 6.0E-06 GAAAATTGTTATAAAT 16 V_BRN2_01_M00145 TRANSFAC + 64359979 64359994 3.0E-06 TATATTGAAAATAAAT 16 V_TCFAP2E_04_M02926 TRANSFAC - 64354962 64354975 8.0E-06 CTCTACAAAAAAAA 14 V_CDX_Q5_M00991 TRANSFAC - 64360011 64360028 7.0E-06 AAAAACTAAAGATATCAA 18 V_CEBPB_01_M00109 TRANSFAC - 64359963 64359976 1.0E-06 ATATTAAGAAATGG 14 V_TGIF2_01_M01407 TRANSFAC - 64359909 64359924 7.0E-06 GCTTAGCTGTCAATGT 16 V_RPC155_01_M01798 TRANSFAC - 64355003 64355018 3.0E-06 CCAGGAGTTGGAGACC 16 V_ELF4_04_M02850 TRANSFAC - 64354958 64354974 0.0E+00 TCTACAAAAAAAAATAC 17 V_ELF4_04_M02850 TRANSFAC - 64354960 64354976 4.0E-06 TCTCTACAAAAAAAAAT 17 V_ELF4_04_M02850 TRANSFAC - 64355085 64355101 8.0E-06 TCTTTAAAAACAATTTT 17 V_SOX13_03_M02797 TRANSFAC + 64353349 64353364 1.0E-06 TTTATAACAATTTTCC 16 V_SOX13_03_M02797 TRANSFAC - 64355083 64355098 1.0E-06 TTAAAAACAATTTTCC 16 V_SOX7_03_M02807 TRANSFAC + 64353347 64353368 1.0E-06 CATTTATAACAATTTTCCTTAA 22 V_SOX7_03_M02807 TRANSFAC - 64355079 64355100 6.0E-06 CTTTAAAAACAATTTTCCTGCC 22 V_HELIOSA_02_M01004 TRANSFAC - 64353358 64353368 1.0E-06 TTAAGGAAAAT 11 V_MEIS2_01_M01488 TRANSFAC - 64359909 64359924 9.0E-06 GCTTAGCTGTCAATGT 16 V_HOXA6_01_M01392 TRANSFAC + 64359401 64359416 4.0E-06 AAAATAATTGCTACAT 16 V_TGIF_02_M01346 TRANSFAC + 64359908 64359924 0.0E+00 TACATTGACAGCTAAGC 17 V_ZFP105_03_M02827 TRANSFAC - 64359460 64359474 4.0E-06 TGTCAACAACAAAAA 15 V_TEF_Q6_M00672 TRANSFAC - 64359950 64359961 8.0E-06 TTGTAAACACAA 12 V_NFAT_Q6_M00302 TRANSFAC - 64353357 64353368 7.0E-06 TTAAGGAAAATT 12 V_XFD3_01_M00269 TRANSFAC - 64359463 64359476 1.0E-06 TATGTCAACAACAA 14 V_DOBOX4_01_M01359 TRANSFAC + 64359787 64359803 1.0E-06 TTTATATATACCACTTG 17 V_RSRFC4_Q2_M00407 TRANSFAC - 64359784 64359800 5.0E-06 GTGGTATATATAAACAG 17 V_AMEF2_Q6_M00403 TRANSFAC + 64359382 64359399 1.0E-06 AGTGCTAAAATTAGCTAC 18 V_AMEF2_Q6_M00403 TRANSFAC + 64359784 64359801 0.0E+00 CTGTTTATATATACCACT 18 V_ARID3A_02_M02839 TRANSFAC - 64360007 64360021 2.0E-06 AAAGATATCAACTTA 15 V_NKX22_02_M01372 TRANSFAC + 64359793 64359809 6.0E-06 TATACCACTTGAGGAGT 17 V_MEF2_03_M00232 TRANSFAC + 64359379 64359400 1.0E-06 CTTAGTGCTAAAATTAGCTACC 22 V_MEF2_03_M00232 TRANSFAC - 64360009 64360030 1.0E-05 GTAAAAACTAAAGATATCAACT 22 V_SOX18_03_M02801 TRANSFAC - 64353348 64353363 0.0E+00 GAAAATTGTTATAAAT 16 V_SOX18_03_M02801 TRANSFAC + 64355084 64355099 0.0E+00 GAAAATTGTTTTTAAA 16 V_SOX18_03_M02801 TRANSFAC + 64360040 64360055 2.0E-06 CAACATTGTTTTAAGA 16 V_TATA_C_M00216 TRANSFAC - 64355092 64355101 3.0E-06 TCTTTAAAAA 10 V_HOX13_01_M00023 TRANSFAC - 64355147 64355176 7.0E-06 ACAGCCCATACCCATTAGTAAGTGTTACCC 30 V_OCT1_04_M00138 TRANSFAC + 64359974 64359996 2.0E-06 TATGGTATATTGAAAATAAATGT 23 V_HBP1_03_M02762 TRANSFAC - 64360087 64360102 4.0E-06 TATCTGAATGAAAGGC 16 V_MEF2_04_M00233 TRANSFAC + 64359379 64359400 2.0E-06 CTTAGTGCTAAAATTAGCTACC 22 V_GATA1_09_M02254 TRANSFAC - 64360106 64360116 3.0E-06 GCAGATAAGAG 11 V_AP1_C_M00199 TRANSFAC - 64353341 64353349 3.0E-06 ATGAGTCAG 9 V_AP1_C_M00199 TRANSFAC + 64355109 64355117 3.0E-06 ATGAGTCAG 9 V_GATA5_04_M02860 TRANSFAC - 64360008 64360024 0.0E+00 ACTAAAGATATCAACTT 17 V_AP1_01_M00517 TRANSFAC - 64353339 64353351 2.0E-06 AAATGAGTCAGAA 13 V_AP1_01_M00517 TRANSFAC + 64355107 64355119 4.0E-06 TAATGAGTCAGAT 13 V_TGIF1_01_M03111 TRANSFAC + 64359908 64359924 0.0E+00 TACATTGACAGCTAAGC 17 V_OCT4_02_M01124 TRANSFAC + 64355088 64355102 8.0E-06 ATTGTTTTTAAAGAG 15 V_HFH8_01_M00294 TRANSFAC - 64359883 64359895 9.0E-06 ATTTGTTTGTAAA 13 V_SOX15_03_M02799 TRANSFAC + 64353349 64353365 7.0E-06 TTTATAACAATTTTCCT 17 V_FAC1_01_M00456 TRANSFAC - 64359460 64359473 5.0E-06 GTCAACAACAAAAA 14 V_CEBPA_01_M00116 TRANSFAC - 64360022 64360035 8.0E-06 ATATTGTAAAAACT 14 V_OSR2_04_M02889 TRANSFAC + 64359391 64359406 0.0E+00 ATTAGCTACCAAAATA 16 V_GATA1_04_M00128 TRANSFAC - 64360105 64360117 1.0E-06 AGCAGATAAGAGT 13 V_FOXL1_02_M02857 TRANSFAC - 64359421 64359436 5.0E-06 TCATCATAACAGAAAA 16 V_SIRT6_01_M01797 TRANSFAC - 64360107 64360114 7.0E-06 AGATAAGA 8 V_FOXL1_04_M02753 TRANSFAC - 64359948 64359964 9.0E-06 GGATTGTAAACACAAGA 17 V_FOXL1_04_M02753 TRANSFAC + 64359980 64359996 3.0E-06 ATATTGAAAATAAATGT 17 V_FOXJ3_06_M02855 TRANSFAC - 64359421 64359437 9.0E-06 TTCATCATAACAGAAAA 17 V_GFI1B_01_M01058 TRANSFAC + 64359816 64359827 7.0E-06 AAAATCACTGAA 12 V_HDX_01_M01333 TRANSFAC + 64359811 64359827 1.0E-06 TATTCAAAATCACTGAA 17 V_TCF7_04_M02921 TRANSFAC + 64359879 64359893 9.0E-06 TCATTTTACAAACAA 15 V_OSR2_03_M02785 TRANSFAC - 64360111 64360126 2.0E-06 ACCTACAGTAGCAGAT 16 V_FOXO3_01_M00477 TRANSFAC + 64359463 64359476 1.0E-06 TTGTTGTTGACATA 14 V_FOXO3_01_M00477 TRANSFAC + 64359949 64359962 6.0E-06 CTTGTGTTTACAAT 14 V_RSRFC4_01_M00026 TRANSFAC + 64359383 64359398 5.0E-06 GTGCTAAAATTAGCTA 16 V_RSRFC4_01_M00026 TRANSFAC - 64359383 64359398 2.0E-06 TAGCTAATTTTAGCAC 16 V_RSRFC4_01_M00026 TRANSFAC + 64359785 64359800 6.0E-06 TGTTTATATATACCAC 16 V_MEF3_B_M00319 TRANSFAC - 64360077 64360089 1.0E-05 GGCTCATGTTTCT 13 V_SRF_Q4_M00810 TRANSFAC - 64359962 64359979 8.0E-06 ACCATATTAAGAAATGGA 18 V_BBX_03_M02739 TRANSFAC + 64359816 64359830 8.0E-06 AAAATCACTGAAATG 15 V_OSR1_04_M02888 TRANSFAC + 64359391 64359406 1.0E-06 ATTAGCTACCAAAATA 16 V_SOX8_03_M02808 TRANSFAC - 64353349 64353365 6.0E-06 AGGAAAATTGTTATAAA 17 V_SOX8_03_M02808 TRANSFAC + 64355082 64355098 3.0E-06 AGGAAAATTGTTTTTAA 17 V_SRF_06_M02916 TRANSFAC - 64354958 64354974 2.0E-06 TCTACAAAAAAAAATAC 17 V_SRF_06_M02916 TRANSFAC - 64354959 64354975 8.0E-06 CTCTACAAAAAAAAATA 17 V_FOXJ2_01_M00422 TRANSFAC - 64359780 64359797 4.0E-06 GTATATATAAACAGTATA 18 V_SATB1_01_M01232 TRANSFAC - 64359380 64359391 9.0E-06 TTTTAGCACTAA 12 V_SIX6_08_M02897 TRANSFAC - 64359784 64359800 3.0E-06 GTGGTATATATAAACAG 17 V_SIX6_08_M02897 TRANSFAC + 64359785 64359801 4.0E-06 TGTTTATATATACCACT 17 V_HOMEZ_01_M01429 TRANSFAC + 64355083 64355099 8.0E-06 GGAAAATTGTTTTTAAA 17 V_SOX2_Q6_M01272 TRANSFAC + 64360038 64360053 8.0E-06 TTCAACATTGTTTTAA 16 V_BSX_01_M01442 TRANSFAC + 64359401 64359416 3.0E-06 AAAATAATTGCTACAT 16 V_SOX12_03_M02796 TRANSFAC - 64353348 64353361 0.0E+00 AAATTGTTATAAAT 14 V_SOX12_03_M02796 TRANSFAC + 64355086 64355099 1.0E-06 AAATTGTTTTTAAA 14 V_SRY_05_M02917 TRANSFAC - 64355083 64355099 5.0E-06 TTTAAAAACAATTTTCC 17 V_MEF2_01_M00006 TRANSFAC - 64355085 64355100 1.0E-06 CTTTAAAAACAATTTT 16 V_MEF2A_05_M01301 TRANSFAC - 64359788 64359799 6.0E-06 TGGTATATATAA 12 V_FOXO4_01_M00472 TRANSFAC - 64355086 64355096 3.0E-06 AAAAACAATTT 11 V_HMEF2_Q6_M00406 TRANSFAC - 64355085 64355100 8.0E-06 CTTTAAAAACAATTTT 16 V_HMEF2_Q6_M00406 TRANSFAC + 64359384 64359399 4.0E-06 TGCTAAAATTAGCTAC 16 V_BRN3C_01_M01408 TRANSFAC - 64353342 64353357 5.0E-06 TGTTATAAATGAGTCA 16 V_SOX5_07_M02909 TRANSFAC + 64353329 64353345 8.0E-06 AGAAAAATTATTCTGAC 17 V_SOX5_07_M02909 TRANSFAC - 64353349 64353365 0.0E+00 AGGAAAATTGTTATAAA 17 V_SOX5_07_M02909 TRANSFAC + 64355082 64355098 1.0E-06 AGGAAAATTGTTTTTAA 17 V_ZFP128_04_M02932 TRANSFAC + 64359785 64359798 1.0E-06 TGTTTATATATACC 14 V_ZFP128_04_M02932 TRANSFAC - 64359785 64359798 3.0E-06 GGTATATATAAACA 14 V_BARX1_01_M01340 TRANSFAC + 64359401 64359416 0.0E+00 AAAATAATTGCTACAT 16 V_DMRT1_01_M01146 TRANSFAC - 64360039 64360053 1.0E-05 TTAAAACAATGTTGA 15 V_GLIS2_04_M02863 TRANSFAC + 64355088 64355101 6.0E-06 ATTGTTTTTAAAGA 14 V_FOXK1_03_M02752 TRANSFAC - 64359462 64359478 9.0E-06 ACTATGTCAACAACAAA 17 V_FOXK1_03_M02752 TRANSFAC - 64359948 64359964 3.0E-06 GGATTGTAAACACAAGA 17 V_RFX1_02_M00281 TRANSFAC + 64354000 64354017 0.0E+00 ATGTTGCTATGGTAACAA 18 V_RFX1_02_M00281 TRANSFAC - 64354000 64354017 0.0E+00 TTGTTACCATAGCAACAT 18 V_SOX14_03_M02798 TRANSFAC + 64353348 64353363 5.0E-06 ATTTATAACAATTTTC 16 V_SOX14_03_M02798 TRANSFAC - 64353348 64353363 2.0E-06 GAAAATTGTTATAAAT 16 V_HOXC8_01_M01321 TRANSFAC - 64359401 64359416 5.0E-06 ATGTAGCAATTATTTT 16 V_IPF1_06_M01438 TRANSFAC + 64359401 64359416 6.0E-06 AAAATAATTGCTACAT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.