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Optimal Promoter Size

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OTP Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 23440 orthopedia homeobox chr5 - 76934022 - 76939522 76934522 V_OTP_01_M01323 Transcription Factor Binding Sites   Download all TFBS in the OTP promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX4_HMG_DBD_dimeric_16_1 SELEX - 76936002 76936017 4.0E-06 CAGCATTTTCAATGTT 16 RARB_nuclearreceptor_full_dimeric_16_1 SELEX + 76935308 76935323 8.0E-06 AAAGTTTCTAAGTTCA 16 SOX8_HMG_full_dimeric_15_1 SELEX - 76936002 76936016 3.0E-06 AGCATTTTCAATGTT 15 NR2F1_MA0017.1 JASPAR - 76935310 76935323 4.0E-06 TGAACTTAGAAACT 14 TEAD3_TEA_DBD_dimeric_17_1 SELEX - 76937641 76937657 0.0E+00 ACATTCTTGTCATTCCG 17 Pou5f1_MA0142.1 JASPAR - 76934525 76934539 6.0E-06 CATTATAATGCAAGA 15 TEAD1_TEA_full_dimeric_17_1 SELEX - 76937641 76937657 1.0E-06 ACATTCTTGTCATTCCG 17 REST_MA0138.2 JASPAR + 76931627 76931647 0.0E+00 TTCAGCACCCTGGATAGCTCA 21 Zfx_MA0146.1 JASPAR + 76934744 76934757 5.0E-06 GCCGCCTCGGCCTC 14 V_NFKB_C_M00208 TRANSFAC - 76934638 76934649 6.0E-06 GGGGACTCTCCG 12 V_SOX40_04_M02908 TRANSFAC + 76934527 76934542 6.0E-06 TTGCATTATAATGTCC 16 V_SRY_07_M02813 TRANSFAC + 76934527 76934542 2.0E-06 TTGCATTATAATGTCC 16 V_SRY_07_M02813 TRANSFAC - 76934527 76934542 7.0E-06 GGACATTATAATGCAA 16 V_ZFX_01_M01593 TRANSFAC - 76934745 76934760 8.0E-06 GGCGAGGCCGAGGCGG 16 V_POU5F1_02_M02245 TRANSFAC - 76934525 76934539 6.0E-06 CATTATAATGCAAGA 15 V_MEIS1AHOXA9_01_M00420 TRANSFAC + 76934565 76934578 1.0E-06 TAACAGTTGAATGA 14 V_EAR2_Q2_M01728 TRANSFAC - 76939245 76939258 5.0E-06 TTCACTTTGCCCTC 14 V_HOXD13_01_M01404 TRANSFAC + 76930881 76930896 6.0E-06 TTTTTCATAAAATCAG 16 V_HOXD13_01_M01404 TRANSFAC + 76931687 76931702 6.0E-06 CTGTCCATAAAATATT 16 V_SOX7_03_M02807 TRANSFAC - 76930895 76930916 7.0E-06 AATAAAATATAATTGAACAACT 22 V_HNF4_01_B_M00411 TRANSFAC + 76939245 76939259 9.0E-06 GAGGGCAAAGTGAAG 15 V_COUP_01_M00158 TRANSFAC - 76935310 76935323 4.0E-06 TGAACTTAGAAACT 14 V_NKX31_02_M02782 TRANSFAC + 76935334 76935350 2.0E-06 CAACTCCACTTAAGGCT 17 V_NFKB_Q6_M00194 TRANSFAC - 76934637 76934650 6.0E-06 GGGGGACTCTCCGG 14 V_ZBTB7B_03_M02826 TRANSFAC + 76937625 76937639 2.0E-06 ATGGCCCCCAAATCT 15 V_REST_01_M01256 TRANSFAC - 76931630 76931651 0.0E+00 CTCTTGAGCTATCCAGGGTGCT 22 V_SOX12_04_M02900 TRANSFAC + 76935992 76936007 2.0E-06 ACTTAGACAAAACATT 16 V_FOXO1_Q5_M01216 TRANSFAC + 76931996 76932004 8.0E-06 CAAAACAAA 9 V_NKX32_02_M01482 TRANSFAC + 76935334 76935350 4.0E-06 CAACTCCACTTAAGGCT 17 V_PTF1BETA_Q6_M00657 TRANSFAC - 76934795 76934808 1.0E-06 GAGAAAATCGCAGG 14 V_GFI1_Q6_M01067 TRANSFAC + 76930888 76930900 9.0E-06 TAAAATCAGTTGT 13 V_SOX15_03_M02799 TRANSFAC - 76930890 76930906 6.0E-06 AATTGAACAACTGATTT 17 V_MTF1_06_M02882 TRANSFAC - 76930879 76930892 3.0E-06 TTTTATGAAAAAAG 14 V_POU5F1_01_M01307 TRANSFAC - 76934524 76934533 9.0E-06 AATGCAAGAA 10 V_FOXL1_02_M02857 TRANSFAC + 76931992 76932007 3.0E-06 ACTCCAAAACAAAACG 16 V_FOXJ3_06_M02855 TRANSFAC + 76931991 76932007 4.0E-06 GACTCCAAAACAAAACG 17 V_FOXJ3_06_M02855 TRANSFAC + 76935994 76936010 4.0E-06 TTAGACAAAACATTGAA 17 V_HDX_01_M01333 TRANSFAC + 76937658 76937674 8.0E-06 CTTCAGAAATCACTTCA 17 V_NRSF_01_M00256 TRANSFAC + 76931627 76931647 3.0E-06 TTCAGCACCCTGGATAGCTCA 21 V_REST_02_M02256 TRANSFAC + 76931627 76931647 0.0E+00 TTCAGCACCCTGGATAGCTCA 21 V_HOXD10_01_M01375 TRANSFAC + 76931687 76931703 2.0E-06 CTGTCCATAAAATATTT 17 V_OCT4_01_M01125 TRANSFAC - 76934525 76934539 3.0E-06 CATTATAATGCAAGA 15

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