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SYNM Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 23336 synemin, intermediate filament protein chr15 + 99640285 - 99645785 99645285 Transcription Factor Binding Sites   Download all TFBS in the SYNM promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HINFP1_C2H2_full_dimeric_19_1 SELEX + 99646321 99646339 1.0E-06 GCGGACCGGTAGGGCCCGC 19 HINFP1_C2H2_full_dimeric_19_1 SELEX - 99646321 99646339 1.0E-05 GCGGGCCCTACCGGTCCGC 19 ZNF713_C2H2_full_monomeric_17_1 SELEX + 99649941 99649957 1.0E-06 GTGAAAAATGCCACGTA 17 Zfp652_C2H2_DBD_monomeric_13_1 SELEX - 99646468 99646480 8.0E-06 GTCAAGAGTTAAA 13 NHLH1_MA0048.1 JASPAR + 99646137 99646148 3.0E-06 GAGCAGCTGCGC 12 NHLH1_MA0048.1 JASPAR - 99646137 99646148 2.0E-06 GCGCAGCTGCTC 12 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 99650189 99650200 1.0E-06 TTTAAAAATAGA 12 ZNF232_C2H2_full_monomeric_19_1 SELEX + 99650187 99650205 6.0E-06 GTTTTAAAAATAGACTGAG 19 NFYA_MA0060.1 JASPAR - 99645190 99645205 0.0E+00 TCCAGCCAATCAGAGC 16 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 99650189 99650200 1.0E-06 TTTAAAAATAGA 12 XBP1_bZIP_DBD_dimeric_12_1 SELEX + 99646819 99646830 8.0E-06 GCTGACGTCAGA 12 XBP1_bZIP_DBD_dimeric_12_1 SELEX - 99646819 99646830 1.0E-05 TCTGACGTCAGC 12 MAFF_bZIP_DBD_dimeric_15_1 SELEX + 99649927 99649941 2.0E-06 TTGCAGATTCAGCAG 15 MAFF_bZIP_DBD_dimeric_15_1 SELEX - 99649927 99649941 1.0E-06 CTGCTGAATCTGCAA 15 Pax4_MA0068.1 JASPAR + 99647030 99647059 7.0E-06 GGAAATATTCCCAAATCACACTATCAGTAG 30 TCF7L1_HMG_full_monomeric_12_1 SELEX - 99646745 99646756 6.0E-06 CAAGATCAAACA 12 MEF2B_MADS_full_dimeric_12_1 SELEX + 99650189 99650200 5.0E-06 TTTAAAAATAGA 12 Foxq1_MA0040.1 JASPAR - 99646901 99646911 4.0E-06 AACTGTTTATA 11 MEF2A_MA0052.1 JASPAR - 99650190 99650199 3.0E-06 CTATTTTTAA 10 Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 99646459 99646468 6.0E-06 AGCAGCTGCC 10 Gfi_MA0038.1 JASPAR + 99647041 99647050 7.0E-06 CAAATCACAC 10 NFIX_NFI_full_monomeric_9_2 SELEX + 99646687 99646695 8.0E-06 TTTGCCAAT 9 Mafb_bZIP_DBD_dimeric_17_1 SELEX + 99649926 99649942 1.0E-06 GTTGCAGATTCAGCAGT 17 Mafb_bZIP_DBD_dimeric_17_1 SELEX - 99649926 99649942 4.0E-06 ACTGCTGAATCTGCAAC 17 MAFK_bZIP_full_dimeric_15_1 SELEX + 99649927 99649941 1.0E-06 TTGCAGATTCAGCAG 15 MAFK_bZIP_full_dimeric_15_1 SELEX - 99649927 99649941 2.0E-06 CTGCTGAATCTGCAA 15 MAFK_bZIP_DBD_dimeric_21_1 SELEX + 99649924 99649944 7.0E-06 TGGTTGCAGATTCAGCAGTGA 21 MAFK_bZIP_DBD_dimeric_21_1 SELEX - 99649924 99649944 9.0E-06 TCACTGCTGAATCTGCAACCA 21 SCRT1_C2H2_DBD_monomeric_15_1 SELEX - 99646950 99646964 9.0E-06 CAGCCACAGGTGTCA 15 MTF1_C2H2_DBD_monomeric_14_1 SELEX + 99646803 99646816 4.0E-06 TTTGCTCACAGCAC 14 ZNF282_C2H2_DBD_monomeric_17_1 SELEX - 99646844 99646860 5.0E-06 CTTTCCCACAACTTTTA 17 TBX21_TBX_full_dimeric_19_1 SELEX + 99646470 99646488 8.0E-06 TAACTCTTGACAAGCGTGA 19 NHLH1_bHLH_full_dimeric_10_1 SELEX + 99646138 99646147 5.0E-06 AGCAGCTGCG 10 NHLH1_bHLH_full_dimeric_10_1 SELEX - 99646138 99646147 4.0E-06 CGCAGCTGCT 10 E2F2_E2F_DBD_dimeric_18_1 SELEX + 99644956 99644973 8.0E-06 AGAAGTCGCTCCAAAATC 18 IRF2_MA0051.1 JASPAR - 99646526 99646543 2.0E-06 GGAAAATGGAAGGAAAAC 18 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 99646902 99646915 4.0E-06 ATAAACAGTTACTA 14 V_FREAC7_01_M00293 TRANSFAC + 99646897 99646912 9.0E-06 GTGATATAAACAGTTA 16 V_APOLYA_B_M00310 TRANSFAC - 99644992 99645006 9.0E-06 AATAGAAGCCTATTG 15 V_ATF_01_M00017 TRANSFAC - 99646818 99646831 7.0E-06 ATCTGACGTCAGCG 14 V_NRSF_Q4_M01028 TRANSFAC - 99645750 99645768 3.0E-06 CTGCAGCTCGCGCTGCTGC 19 V_ZFX_01_M01593 TRANSFAC - 99645825 99645840 2.0E-06 GTCGAGGCCTCGGCGC 16 V_CREB_Q4_M00178 TRANSFAC - 99646819 99646830 5.0E-06 TCTGACGTCAGC 12 V_MAFB_03_M02879 TRANSFAC - 99646682 99646696 4.0E-06 TATTGGCAAAATAAA 15 V_CREB_Q4_01_M00917 TRANSFAC + 99646818 99646828 2.0E-06 CGCTGACGTCA 11 V_MEF2_02_M00231 TRANSFAC + 99650183 99650204 0.0E+00 TGCTGTTTTAAAAATAGACTGA 22 V_NKX25_Q6_M02108 TRANSFAC + 99646596 99646606 3.0E-06 CTCACTTGCAG 11 V_STAT6_01_M00494 TRANSFAC + 99645003 99645010 7.0E-06 TATTTCCA 8 V_STAT6_01_M00494 TRANSFAC - 99647029 99647036 7.0E-06 TATTTCCA 8 V_PRX2_Q2_M02115 TRANSFAC - 99650097 99650105 7.0E-06 TCAAAGTAA 9 V_NFAT2_01_M01748 TRANSFAC - 99645003 99645011 6.0E-06 ATGGAAATA 9 V_MEF2A_Q6_M02024 TRANSFAC + 99647105 99647114 1.0E-06 TATTTTAAGA 10 V_MEF2A_Q6_M02024 TRANSFAC - 99650189 99650198 1.0E-06 TATTTTTAAA 10 V_STAT4_Q4_M01666 TRANSFAC + 99646917 99646930 9.0E-06 TTCAGGGAAGCAAA 14 V_NFY_C_M00209 TRANSFAC + 99645192 99645205 1.0E-06 TCTGATTGGCTGGA 14 V_ETS_Q4_M00771 TRANSFAC + 99648262 99648273 3.0E-06 ATCCGCTTCCTG 12 V_ARID5A_03_M02736 TRANSFAC + 99647101 99647114 6.0E-06 CAAATATTTTAAGA 14 V_TEF_Q6_M00672 TRANSFAC + 99646878 99646889 2.0E-06 ATGTTATTACAA 12 V_NFAT_Q6_M00302 TRANSFAC + 99647026 99647037 7.0E-06 AATTGGAAATAT 12 V_RSRFC4_Q2_M00407 TRANSFAC + 99650187 99650203 0.0E+00 GTTTTAAAAATAGACTG 17 V_IRF4_04_M02872 TRANSFAC - 99646579 99646593 6.0E-06 AGGTTTCTCGGTTGA 15 V_NFKB_Q6_M00194 TRANSFAC - 99649962 99649975 9.0E-06 AAGGGACTTTCTTT 14 V_TBX5_02_M01020 TRANSFAC + 99641042 99641051 3.0E-06 TAAGGTGTTC 10 V_IK1_01_M00086 TRANSFAC - 99647033 99647045 1.0E-06 ATTTGGGAATATT 13 V_SOX_Q6_M01014 TRANSFAC - 99649955 99649967 6.0E-06 TTCTTTGTTTTAC 13 V_MEF2_03_M00232 TRANSFAC + 99650183 99650204 0.0E+00 TGCTGTTTTAAAAATAGACTGA 22 V_ASCL2_03_M02737 TRANSFAC - 99646455 99646471 9.0E-06 TAAAGCAGCTGCCACCT 17 V_YY1_Q6_02_M01035 TRANSFAC + 99646531 99646541 9.0E-06 CCTTCCATTTT 11 V_IK2_01_M00087 TRANSFAC - 99647034 99647045 4.0E-06 ATTTGGGAATAT 12 V_MEF2_04_M00233 TRANSFAC + 99650183 99650204 6.0E-06 TGCTGTTTTAAAAATAGACTGA 22 V_HFH1_01_M00129 TRANSFAC - 99646900 99646911 1.0E-06 AACTGTTTATAT 12 V_MEF2_Q6_01_M00941 TRANSFAC - 99650190 99650201 1.0E-06 GTCTATTTTTAA 12 V_ATF3_Q6_M00513 TRANSFAC - 99646818 99646831 0.0E+00 ATCTGACGTCAGCG 14 V_TBP_06_M02814 TRANSFAC - 99650185 99650200 7.0E-06 TCTATTTTTAAAACAG 16 V_IK3_01_M00088 TRANSFAC - 99647033 99647045 9.0E-06 ATTTGGGAATATT 13 V_SOX11_03_M02795 TRANSFAC + 99649954 99649970 1.0E-06 CGTAAAACAAAGAAAGT 17 V_NEUROD_02_M01288 TRANSFAC + 99650179 99650190 1.0E-06 TTGCTGCTGTTT 12 V_HFH8_01_M00294 TRANSFAC - 99646899 99646911 9.0E-06 AACTGTTTATATC 13 V_CREM_Q6_M01820 TRANSFAC - 99646818 99646828 2.0E-06 TGACGTCAGCG 11 V_CAAT_01_M00254 TRANSFAC - 99645194 99645205 2.0E-06 TCCAGCCAATCA 12 V_ATF1_Q6_M00691 TRANSFAC + 99646818 99646828 5.0E-06 CGCTGACGTCA 11 V_ALPHACP1_01_M00687 TRANSFAC - 99645193 99645203 1.0E-06 CAGCCAATCAG 11 V_NFYC_Q5_M02107 TRANSFAC - 99645190 99645203 0.0E+00 CAGCCAATCAGAGC 14 V_TAL1_01_M01591 TRANSFAC + 99640965 99640977 7.0E-06 CTCGCTTCTCTCC 13 V_CEBPA_01_M00116 TRANSFAC - 99646684 99646697 7.0E-06 ATATTGGCAAAATA 14 V_CNOT3_01_M01253 TRANSFAC + 99645174 99645183 4.0E-06 GGCCGCGCCG 10 V_CNOT3_01_M01253 TRANSFAC - 99646045 99646054 4.0E-06 GGCCGCGCCG 10 V_FOXL1_02_M02857 TRANSFAC - 99646679 99646694 3.0E-06 TTGGCAAAATAAAAAC 16 V_HEN1_02_M00058 TRANSFAC + 99646132 99646153 8.0E-06 GGTTGGAGCAGCTGCGCGCGCG 22 V_HEN1_02_M00058 TRANSFAC + 99646453 99646474 6.0E-06 TTAGGTGGCAGCTGCTTTAACT 22 V_DELTAEF1_01_M00073 TRANSFAC - 99649989 99649999 8.0E-06 TTCCACCTGAA 11 V_ATF1_03_M02738 TRANSFAC - 99646817 99646832 8.0E-06 GATCTGACGTCAGCGT 16 V_HDX_01_M01333 TRANSFAC - 99646692 99646708 5.0E-06 ACTGGGAAATCATATTG 17 V_ATF2_Q5_M01862 TRANSFAC + 99646818 99646829 4.0E-06 CGCTGACGTCAG 12 V_ATF2_Q5_M01862 TRANSFAC - 99646820 99646831 1.0E-05 ATCTGACGTCAG 12 V_XBP1_01_M00251 TRANSFAC - 99649946 99649962 6.0E-06 TGTTTTACGTGGCATTT 17 V_TCF7_04_M02921 TRANSFAC + 99650185 99650199 2.0E-06 CTGTTTTAAAAATAG 15 V_NFY_01_M00287 TRANSFAC - 99645190 99645205 0.0E+00 TCCAGCCAATCAGAGC 16 V_PBX1_03_M01017 TRANSFAC - 99646743 99646754 9.0E-06 AGATCAAACAAG 12 V_RSRFC4_01_M00026 TRANSFAC + 99650187 99650202 8.0E-06 GTTTTAAAAATAGACT 16 V_RSRFC4_01_M00026 TRANSFAC - 99650187 99650202 0.0E+00 AGTCTATTTTTAAAAC 16 V_PLZF_02_M01075 TRANSFAC + 99650179 99650207 6.0E-06 TTGCTGCTGTTTTAAAAATAGACTGAGTG 29 V_ETS1_B_M00339 TRANSFAC + 99646873 99646887 4.0E-06 GCAGGATGTTATTAC 15 V_ZIC3_04_M02837 TRANSFAC - 99641018 99641032 6.0E-06 AACCCCCGGTGGTGT 15 V_HNF1A_Q5_M02013 TRANSFAC + 99646908 99646918 6.0E-06 AGTTACTATTT 11 V_NFYA_Q5_M02106 TRANSFAC - 99645190 99645203 0.0E+00 CAGCCAATCAGAGC 14 V_ZID_01_M00085 TRANSFAC + 99645466 99645478 8.0E-06 CGGCTCTATGACT 13 V_ATF_B_M00338 TRANSFAC - 99646818 99646829 4.0E-06 CTGACGTCAGCG 12 V_RNF96_01_M01199 TRANSFAC + 99645718 99645727 7.0E-06 GCCCGCGGCC 10 V_TCF3_05_M02920 TRANSFAC - 99646679 99646693 8.0E-06 TGGCAAAATAAAAAC 15 V_TCF3_05_M02920 TRANSFAC - 99646680 99646694 5.0E-06 TTGGCAAAATAAAAA 15 V_ZIC2_04_M02836 TRANSFAC - 99641018 99641032 6.0E-06 AACCCCCGGTGGTGT 15 V_SMAD1_01_M01590 TRANSFAC + 99649956 99649967 5.0E-06 TAAAACAAAGAA 12 V_SOX9_Q4_M01284 TRANSFAC + 99649958 99649968 3.0E-06 AAACAAAGAAA 11 V_DMRT5_01_M01150 TRANSFAC - 99646903 99646917 2.0E-06 AATAGTAACTGTTTA 15 V_DMRT5_01_M01150 TRANSFAC + 99646905 99646919 7.0E-06 AACAGTTACTATTTC 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.