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LPHN3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 23284 latrophilin 3 chr4 + 62357838 - 62363338 62362838 Transcription Factor Binding Sites   Download all TFBS in the LPHN3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX - 62367687 62367702 2.0E-06 TTGCATTATAGATAAG 16 CTCF_MA0139.1 JASPAR - 62366831 62366849 2.0E-06 GAGCCAGTAGGTGGCAGAG 19 PDX1_homeodomain_DBD_dimeric_18_1 SELEX - 62366879 62366896 3.0E-06 TAAATTAATGATATTTAT 18 FOXL1_forkhead_full_dimeric_13_1 SELEX + 62366874 62366886 5.0E-06 GGTTAATAAATAT 13 SOX9_HMG_full_dimeric_17_3 SELEX + 62366878 62366894 9.0E-06 AATAAATATCATTAATT 17 SOX9_HMG_full_dimeric_17_3 SELEX - 62366878 62366894 7.0E-06 AATTAATGATATTTATT 17 SOX8_HMG_full_dimeric_17_1 SELEX + 62366878 62366894 8.0E-06 AATAAATATCATTAATT 17 SOX8_HMG_full_dimeric_17_1 SELEX - 62366878 62366894 2.0E-06 AATTAATGATATTTATT 17 SOX7_HMG_full_dimeric_17_2 SELEX + 62366878 62366894 2.0E-06 AATAAATATCATTAATT 17 SOX15_HMG_full_dimeric_15_3 SELEX + 62366879 62366893 1.0E-06 ATAAATATCATTAAT 15 Pax4_MA0068.1 JASPAR + 62366877 62366906 7.0E-06 TAATAAATATCATTAATTTACCCACTACAA 30 ZIC4_C2H2_DBD_monomeric_15_1 SELEX + 62359351 62359365 5.0E-06 CACCACCCGTTGTGT 15 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX + 62366879 62366892 2.0E-06 ATAAATATCATTAA 14 BARHL2_homeodomain_full_dimeric_16_1 SELEX + 62366880 62366895 2.0E-06 TAAATATCATTAATTT 16 POU4F3_POU_DBD_monomeric_16_1 SELEX - 62367687 62367702 2.0E-06 TTGCATTATAGATAAG 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 62366880 62366895 2.0E-06 TAAATATCATTAATTT 16 FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 62366878 62366891 8.0E-06 TAATGATATTTATT 14 Sox17_HMG_DBD_dimeric_15_2 SELEX + 62366879 62366893 1.0E-06 ATAAATATCATTAAT 15 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 62366875 62366885 9.0E-06 GTTAATAAATA 11 SOX2_HMG_full_dimeric_15_1 SELEX + 62366879 62366893 9.0E-06 ATAAATATCATTAAT 15 FOXI1_MA0042.1 JASPAR - 62366877 62366888 8.0E-06 TGATATTTATTA 12 ZIC3_C2H2_full_monomeric_15_1 SELEX + 62359351 62359365 5.0E-06 CACCACCCGTTGTGT 15 Lhx3_MA0135.1 JASPAR + 62366886 62366898 2.0E-06 TCATTAATTTACC 13 Gata1_MA0035.2 JASPAR - 62366858 62366868 8.0E-06 ACAGATAAACA 11 Gata1_MA0035.2 JASPAR - 62367685 62367695 7.0E-06 ATAGATAAGGA 11 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 62366885 62366897 8.0E-06 GTAAATTAATGAT 13 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX + 62366876 62366892 2.0E-06 TTAATAAATATCATTAA 17 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX - 62366876 62366892 1.0E-06 TTAATGATATTTATTAA 17 SOX18_HMG_full_dimeric_15_3 SELEX + 62366879 62366893 0.0E+00 ATAAATATCATTAAT 15 Sox3_HMG_DBD_dimeric_17_3 SELEX - 62366878 62366894 6.0E-06 AATTAATGATATTTATT 17 FOXO3_forkhead_full_dimeric_14_1 SELEX - 62366851 62366864 9.0E-06 ATAAACAGGATTAC 14 FOXO6_forkhead_DBD_dimeric_14_1 SELEX + 62366851 62366864 4.0E-06 GTAATCCTGTTTAT 14 Sox1_HMG_DBD_dimeric_15_2 SELEX + 62366879 62366893 7.0E-06 ATAAATATCATTAAT 15 POU4F1_POU_DBD_monomeric_14_1 SELEX - 62367689 62367702 9.0E-06 TTGCATTATAGATA 14 HNF1A_MA0046.1 JASPAR + 62366874 62366887 0.0E+00 GGTTAATAAATATC 14 HNF1A_MA0046.1 JASPAR - 62366875 62366888 8.0E-06 TGATATTTATTAAC 14 ZIC1_C2H2_full_monomeric_14_1 SELEX + 62359351 62359364 3.0E-06 CACCACCCGTTGTG 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 62366851 62366864 7.0E-06 GTAATCCTGTTTAT 14 V_DMRT4_01_M01149 TRANSFAC + 62359452 62359464 4.0E-06 AATGTTTCATTTA 13 V_MEIS1BHOXA9_02_M00421 TRANSFAC - 62366857 62366870 4.0E-06 TGACAGATAAACAG 14 V_TST1_02_M01316 TRANSFAC - 62366882 62366898 6.0E-06 GGTAAATTAATGATATT 17 V_TST1_02_M01316 TRANSFAC + 62366883 62366899 6.0E-06 ATATCATTAATTTACCC 17 V_CDX2_Q5_01_M01659 TRANSFAC + 62366876 62366886 2.0E-06 TTAATAAATAT 11 V_SMAD3_Q6_01_M01888 TRANSFAC + 62366779 62366791 0.0E+00 GGACAGACAGACT 13 V_SATB1_Q3_M01723 TRANSFAC - 62366881 62366896 0.0E+00 TAAATTAATGATATTT 16 V_EAR2_Q2_M01728 TRANSFAC + 62359365 62359378 3.0E-06 TGTTCTTTGTCCTC 14 V_GATA_C_M00203 TRANSFAC - 62367683 62367693 4.0E-06 AGATAAGGATA 11 V_NKX61_03_M01489 TRANSFAC - 62366881 62366897 2.0E-06 GTAAATTAATGATATTT 17 V_AFP1_Q6_M00616 TRANSFAC - 62366854 62366864 1.0E-05 ATAAACAGGAT 11 V_LHX3A_01_M00510 TRANSFAC + 62366887 62366896 9.0E-06 CATTAATTTA 10 V_NKX62_Q2_M00489 TRANSFAC + 62366876 62366887 4.0E-06 TTAATAAATATC 12 V_CDP_04_M01344 TRANSFAC - 62366877 62366891 3.0E-06 TAATGATATTTATTA 15 V_HMBOX1_01_M01456 TRANSFAC + 62366867 62366883 5.0E-06 GTCAACTGGTTAATAAA 17 V_IPF1_Q4_M00436 TRANSFAC - 62366884 62366895 4.0E-06 AAATTAATGATA 12 V_DBX2_01_M01360 TRANSFAC - 62366882 62366897 7.0E-06 GTAAATTAATGATATT 16 V_ZFP105_03_M02827 TRANSFAC + 62366878 62366892 8.0E-06 AATAAATATCATTAA 15 V_HNF1_Q6_M00790 TRANSFAC + 62366873 62366890 0.0E+00 TGGTTAATAAATATCATT 18 V_AMEF2_Q6_M00403 TRANSFAC + 62366875 62366892 3.0E-06 GTTAATAAATATCATTAA 18 V_HOXB9_01_M01426 TRANSFAC + 62367673 62367688 7.0E-06 AGAGCCATAATATCCT 16 V_EVI1_01_M00078 TRANSFAC - 62359371 62359386 9.0E-06 AGAGAAGAGAGGACAA 16 V_HNF1_Q6_01_M01011 TRANSFAC - 62366871 62366891 0.0E+00 TAATGATATTTATTAACCAGT 21 V_ELF5_01_M01197 TRANSFAC - 62367681 62367691 2.0E-06 ATAAGGATATT 11 V_CUX1_04_M02959 TRANSFAC - 62366877 62366891 3.0E-06 TAATGATATTTATTA 15 V_CDX1_01_M01373 TRANSFAC + 62366881 62366896 9.0E-06 AAATATCATTAATTTA 16 V_PAX6_Q2_M00979 TRANSFAC - 62366822 62366835 9.0E-06 CAGAGCTGGAATTT 14 V_OCT1_08_M01354 TRANSFAC + 62366880 62366895 9.0E-06 TAAATATCATTAATTT 16 V_OCT1_08_M01354 TRANSFAC - 62366882 62366897 7.0E-06 GTAAATTAATGATATT 16 V_PIT1_01_M01465 TRANSFAC - 62366882 62366898 2.0E-06 GGTAAATTAATGATATT 17 V_PIT1_01_M01465 TRANSFAC + 62366883 62366899 8.0E-06 ATATCATTAATTTACCC 17 V_GATA1_09_M02254 TRANSFAC - 62366858 62366868 8.0E-06 ACAGATAAACA 11 V_GATA1_09_M02254 TRANSFAC - 62367685 62367695 7.0E-06 ATAGATAAGGA 11 V_XFD2_01_M00268 TRANSFAC + 62366876 62366889 6.0E-06 TTAATAAATATCAT 14 V_NCX_02_M01420 TRANSFAC - 62366883 62366899 8.0E-06 GGGTAAATTAATGATAT 17 V_ARID3A_04_M02735 TRANSFAC + 62366872 62366888 5.0E-06 CTGGTTAATAAATATCA 17 V_CTCF_02_M01259 TRANSFAC - 62366833 62366852 1.0E-06 ACAGAGCCAGTAGGTGGCAG 20 V_LHX3b_01_M01971 TRANSFAC + 62366887 62366896 7.0E-06 CATTAATTTA 10 V_CTCF_01_M01200 TRANSFAC - 62366831 62366850 1.0E-06 AGAGCCAGTAGGTGGCAGAG 20 V_NKX63_01_M01470 TRANSFAC - 62366881 62366897 3.0E-06 GTAAATTAATGATATTT 17 V_TAL1_01_M01591 TRANSFAC + 62367683 62367695 9.0E-06 TATCCTTATCTAT 13 V_BRN4_01_M01473 TRANSFAC - 62366882 62366898 2.0E-06 GGTAAATTAATGATATT 17 V_BRN4_01_M01473 TRANSFAC + 62366883 62366899 8.0E-06 ATATCATTAATTTACCC 17 V_HNF1_01_M00132 TRANSFAC + 62366874 62366888 0.0E+00 GGTTAATAAATATCA 15 V_HNF1_01_M00132 TRANSFAC - 62366884 62366898 8.0E-06 GGTAAATTAATGATA 15 V_NKX61_02_M01469 TRANSFAC - 62366882 62366897 6.0E-06 GTAAATTAATGATATT 16 V_AIRE_01_M00999 TRANSFAC - 62367671 62367696 7.0E-06 TATAGATAAGGATATTATGGCTCTAC 26 V_HNF1B_01_M01425 TRANSFAC - 62366868 62366884 8.0E-06 ATTTATTAACCAGTTGA 17 V_FOX_Q2_M00809 TRANSFAC - 62366876 62366888 9.0E-06 TGATATTTATTAA 13 V_HFH3_01_M00289 TRANSFAC - 62366876 62366888 3.0E-06 TGATATTTATTAA 13 V_HNF1A_Q5_M02013 TRANSFAC + 62366874 62366884 2.0E-06 GGTTAATAAAT 11 V_GATA5_03_M02756 TRANSFAC - 62367682 62367698 1.0E-06 ATTATAGATAAGGATAT 17 V_BRN3C_01_M01408 TRANSFAC - 62366882 62366897 5.0E-06 GTAAATTAATGATATT 16 V_HOXA10_01_M01464 TRANSFAC + 62366873 62366888 7.0E-06 TGGTTAATAAATATCA 16 V_IPF1_04_M01236 TRANSFAC + 62366887 62366896 9.0E-06 CATTAATTTA 10 V_GATA1_02_M00126 TRANSFAC - 62367684 62367697 1.0E-06 TTATAGATAAGGAT 14 V_GATA6_04_M02757 TRANSFAC - 62367682 62367698 0.0E+00 ATTATAGATAAGGATAT 17 V_HNF1A_01_M02162 TRANSFAC + 62366874 62366887 0.0E+00 GGTTAATAAATATC 14 V_HNF1A_01_M02162 TRANSFAC - 62366875 62366888 8.0E-06 TGATATTTATTAAC 14 V_PAX4_04_M00380 TRANSFAC + 62366878 62366907 2.0E-06 AATAAATATCATTAATTTACCCACTACAAG 30 V_GATA1_06_M00347 TRANSFAC - 62367686 62367695 2.0E-06 ATAGATAAGG 10 V_HOXC9_01_M01416 TRANSFAC + 62366881 62366896 2.0E-06 AAATATCATTAATTTA 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.