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CSTF2T Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 23283 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant chr10 - 53458855 - 53464355 53459355 Transcription Factor Binding Sites   Download all TFBS in the CSTF2T promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX - 53459786 53459794 5.0E-06 ATAATAAAA 9 NFIA_NFI_full_dimeric_15_1 SELEX - 53460407 53460421 6.0E-06 TTGGCCTCTTTCCAG 15 NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX + 53456129 53456137 2.0E-06 AAAAGTCAA 9 NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX + 53456561 53456569 2.0E-06 AAAAGTCAA 9 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 53459832 53459843 2.0E-06 GCTTTTCCCTCA 12 NFIX_NFI_full_dimeric_15_2 SELEX + 53460407 53460421 6.0E-06 CTGGAAAGAGGCCAA 15 RUNX3_RUNX_DBD_dimeric_16_1 SELEX + 53459718 53459733 2.0E-06 AAACCGCCAACCGAAA 16 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 53454364 53454377 6.0E-06 AAAAAACATGTACT 14 TEAD1_TEA_full_monomeric_10_1 SELEX - 53459237 53459246 5.0E-06 AACATTCCAT 10 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 53459786 53459795 3.0E-06 TATAATAAAA 10 RUNX2_RUNX_DBD_dimeric_16_1 SELEX + 53459718 53459733 8.0E-06 AAACCGCCAACCGAAA 16 Sox17_HMG_DBD_dimeric_15_2 SELEX + 53456566 53456580 8.0E-06 TCAAATACCATTTAT 15 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX - 53459786 53459794 3.0E-06 ATAATAAAA 9 Tcf21_bHLH_DBD_dimeric_14_1 SELEX + 53459993 53460006 8.0E-06 ATAACCGCTGTTAA 14 znf143_MA0088.1 JASPAR + 53460334 53460353 7.0E-06 TGTTTCCCCGCCTGCAATTC 20 TEAD3_TEA_DBD_monomeric_8_1 SELEX - 53459238 53459245 1.0E-05 ACATTCCA 8 TEAD3_TEA_DBD_monomeric_8_1 SELEX + 53459821 53459828 1.0E-05 ACATTCCA 8 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 53456086 53456100 5.0E-06 AGAAACTGAGAGTTT 15 NFIB_NFI_full_dimeric_15_1 SELEX - 53460407 53460421 5.0E-06 TTGGCCTCTTTCCAG 15 ZNF282_C2H2_DBD_monomeric_17_1 SELEX + 53459546 53459562 1.0E-06 CTTTCCCATTTCACGTT 17 Rhox11_homeodomain_DBD_monomeric_9_1 SELEX + 53459998 53460006 7.0E-06 CGCTGTTAA 9 ETV6_ETS_full_monomeric_10_1 SELEX - 53459372 53459381 1.0E-06 AGCGGAAGTG 10 TEAD4_TEA_DBD_monomeric_10_1 SELEX - 53459237 53459246 1.0E-06 AACATTCCAT 10 CDX2_homeodomain_DBD_monomeric_9_1 SELEX - 53459786 53459794 3.0E-06 ATAATAAAA 9 CDX1_homeodomain_DBD_monomeric_9_1 SELEX - 53459786 53459794 3.0E-06 ATAATAAAA 9 TEAD1_MA0090.1 JASPAR + 53459820 53459831 1.0E-05 CACATTCCAGAC 12 V_CDP_03_M01342 TRANSFAC - 53456585 53456601 2.0E-06 ACTGGTTGATCTAGATG 17 V_CEBPG_Q6_M00622 TRANSFAC + 53459523 53459535 4.0E-06 CTTATTACAGAGT 13 V_AP1_Q2_M00173 TRANSFAC + 53456208 53456218 1.0E-06 ACTGACTCAGA 11 V_AP1_Q2_M00173 TRANSFAC + 53456641 53456651 1.0E-06 ACTGACTCAGA 11 V_BTEB3_Q5_M01865 TRANSFAC - 53459669 53459681 3.0E-06 TCAAGGGAAGAGT 13 V_SOX40_04_M02908 TRANSFAC + 53459786 53459801 7.0E-06 TTTTATTATAGTATAG 16 V_SRY_07_M02813 TRANSFAC + 53459786 53459801 8.0E-06 TTTTATTATAGTATAG 16 V_YY1_02_M00069 TRANSFAC - 53459622 53459641 1.0E-06 ATGCGGCCATCTTTACTGTG 20 V_RHOX11_01_M01347 TRANSFAC + 53459994 53460010 1.0E-06 TAACCGCTGTTAATGGA 17 V_HNF1_02_M01379 TRANSFAC - 53459795 53459811 7.0E-06 TCTAGCTTAACTATACT 17 V_MYB_03_M02883 TRANSFAC + 53459923 53459938 9.0E-06 AAATTAACTGACAAGA 16 V_MAFB_05_M02775 TRANSFAC + 53456202 53456218 9.0E-06 AGAATTACTGACTCAGA 17 V_MAFB_05_M02775 TRANSFAC + 53456635 53456651 9.0E-06 AGAATTACTGACTCAGA 17 V_HOXA13_02_M01297 TRANSFAC - 53456097 53456105 8.0E-06 AAGTAAAAC 9 V_CBF_02_M01080 TRANSFAC - 53459615 53459630 3.0E-06 TTTACTGTGGTCATCT 16 V_NFMUE1_Q6_M00651 TRANSFAC - 53459630 53459638 6.0E-06 CGGCCATCT 9 V_MEIS1AHOXA9_01_M00420 TRANSFAC + 53456256 53456269 7.0E-06 TGAGAGATTATTGG 14 V_GTF2IRD1_01_M01229 TRANSFAC - 53454355 53454363 3.0E-06 GGGATTATG 9 V_YY1_Q6_M00793 TRANSFAC - 53459628 53459636 7.0E-06 GCCATCTTT 9 V_CUX1_03_M02958 TRANSFAC - 53456585 53456601 2.0E-06 ACTGGTTGATCTAGATG 17 V_GABPA_04_M02858 TRANSFAC + 53459458 53459473 1.0E-05 CCTGCATCCCACTAAC 16 V_SOX21_03_M02803 TRANSFAC + 53459786 53459801 2.0E-06 TTTTATTATAGTATAG 16 V_SOX21_03_M02803 TRANSFAC - 53459786 53459801 7.0E-06 CTATACTATAATAAAA 16 V_HELIOSA_01_M01003 TRANSFAC - 53454357 53454367 9.0E-06 TTTTGGGATTA 11 V_CEBPB_01_M00109 TRANSFAC - 53454349 53454362 1.0E-06 GGATTATGAAATGA 8 V_RHOX11_02_M01384 TRANSFAC + 53459994 53460010 1.0E-06 TAACCGCTGTTAATGGA 17 V_TAL1_GATA1_01_M02243 TRANSFAC - 53459476 53459493 5.0E-06 CTGAAAGCATTAGATAAG 18 V_HNF1_C_M00206 TRANSFAC - 53459919 53459935 1.0E-06 TGTCAGTTAATTTCCAA 17 V_SPIC_01_M02042 TRANSFAC - 53459372 53459381 9.0E-06 AGCGGAAGTG 10 V_TAL1_Q6_M00993 TRANSFAC - 53460402 53460411 3.0E-06 TCCAGCTGCT 10 V_SOX13_03_M02797 TRANSFAC + 53459904 53459919 9.0E-06 TTTAGAACAACGTTTT 16 V_GFI1_01_M00250 TRANSFAC - 53456205 53456228 1.0E-06 AAACCCTAAATCTGAGTCAGTAAT 24 V_GFI1_01_M00250 TRANSFAC - 53456638 53456661 6.0E-06 AAGCCCTAAATCTGAGTCAGTAAT 24 V_TEF_Q6_M00672 TRANSFAC - 53459788 53459799 7.0E-06 ATACTATAATAA 12 V_CEBPD_Q6_M00621 TRANSFAC + 53454350 53454361 3.0E-06 CATTTCATAATC 7 V_RSRFC4_Q2_M00407 TRANSFAC - 53459803 53459819 9.0E-06 ATTTTAAATCTAGCTTA 17 V_IRX4_01_M01410 TRANSFAC + 53454364 53454380 5.0E-06 AAAAAACATGTACTGCC 17 V_IRX4_01_M01410 TRANSFAC + 53456136 53456152 3.0E-06 AAATATCATGTATAACT 17 V_IRF4_04_M02872 TRANSFAC - 53456087 53456101 9.0E-06 AAAACTCTCAGTTTC 15 V_NFKB_Q6_M00194 TRANSFAC - 53460383 53460396 6.0E-06 TTGGGAATTTACCT 14 V_AP1_Q4_M00188 TRANSFAC + 53456208 53456218 9.0E-06 ACTGACTCAGA 11 V_AP1_Q4_M00188 TRANSFAC + 53456641 53456651 9.0E-06 ACTGACTCAGA 11 V_ARID3A_02_M02839 TRANSFAC + 53456134 53456148 3.0E-06 TCAAATATCATGTAT 15 V_NKX22_02_M01372 TRANSFAC - 53459771 53459787 1.0E-05 AAGGCCACATGAAAATA 17 V_OCT1_04_M00138 TRANSFAC + 53456124 53456146 2.0E-06 TTATGAAAAGTCAAATATCATGT 23 V_OCT1_04_M00138 TRANSFAC + 53456556 53456578 1.0E-05 TTATGAAAAGTCAAATACCATTT 23 Tal1_Gata1_MA0140.1 JASPAR - 53459476 53459493 5.0E-06 CTGAAAGCATTAGATAAG 18 V_EVI1_Q3_M02002 TRANSFAC - 53459932 53459940 6.0E-06 TTTCTTGTC 9 V_TEF_01_M01305 TRANSFAC + 53459820 53459831 1.0E-05 CACATTCCAGAC 12 V_PNR_01_M01650 TRANSFAC + 53456130 53456143 1.0E-06 AAAGTCAAATATCA 14 V_CDC5_01_M00478 TRANSFAC + 53459810 53459821 3.0E-06 GATTTAAAATCA 12 V_TBP_06_M02814 TRANSFAC - 53459935 53459950 1.0E-05 TCAGTTTATATTTCTT 16 V_IRX3_01_M01318 TRANSFAC + 53454364 53454380 4.0E-06 AAAAAACATGTACTGCC 17 V_BLIMP1_Q6_M01066 TRANSFAC - 53459543 53459558 5.0E-06 TGAAATGGGAAAGGAA 16 V_IRX5_01_M01472 TRANSFAC + 53454364 53454380 7.0E-06 AAAAAACATGTACTGCC 17 V_IRX5_01_M01472 TRANSFAC + 53456136 53456152 4.0E-06 AAATATCATGTATAACT 17 V_IRX3_02_M01485 TRANSFAC - 53454363 53454379 1.0E-05 GCAGTACATGTTTTTTG 17 V_IRX3_02_M01485 TRANSFAC + 53454364 53454380 4.0E-06 AAAAAACATGTACTGCC 17 V_IRX3_02_M01485 TRANSFAC + 53456136 53456152 7.0E-06 AAATATCATGTATAACT 17 V_YY1_03_M02044 TRANSFAC - 53459628 53459639 8.0E-06 GCGGCCATCTTT 12 V_ATF1_Q6_M00691 TRANSFAC + 53459676 53459686 1.0E-06 CCTTGACGTCA 11 V_ATF1_Q6_M00691 TRANSFAC - 53459679 53459689 0.0E+00 CTTTGACGTCA 11 V_AP1FJ_Q2_M00172 TRANSFAC + 53456208 53456218 6.0E-06 ACTGACTCAGA 11 V_AP1FJ_Q2_M00172 TRANSFAC + 53456641 53456651 6.0E-06 ACTGACTCAGA 11 V_FOXL1_02_M02857 TRANSFAC - 53459784 53459799 4.0E-06 ATACTATAATAAAAGG 16 V_ERR1_Q2_M00511 TRANSFAC - 53459205 53459218 6.0E-06 AGTTAAAGGACATT 14 V_PARP_Q3_M01211 TRANSFAC + 53456238 53456247 2.0E-06 TGAGAAATAG 10 V_PARP_Q3_M01211 TRANSFAC + 53456671 53456680 2.0E-06 TGAGAAATAG 10 V_RHOX11_05_M03099 TRANSFAC + 53459994 53460010 1.0E-06 TAACCGCTGTTAATGGA 17 V_MYB_Q5_01_M00913 TRANSFAC + 53459927 53459935 4.0E-06 TAACTGACA 9 V_PITX2_Q2_M00482 TRANSFAC + 53454355 53454365 6.0E-06 CATAATCCCAA 11 V_SRF_Q4_M00810 TRANSFAC - 53459224 53459241 5.0E-06 TCCATATGAGGCAACTGA 18 V_IRX2_01_M01405 TRANSFAC + 53454364 53454380 9.0E-06 AAAAAACATGTACTGCC 17 V_IRX2_01_M01405 TRANSFAC + 53456136 53456152 9.0E-06 AAATATCATGTATAACT 17 V_SRF_02_M01257 TRANSFAC - 53459225 53459242 6.0E-06 TTCCATATGAGGCAACTG 18 V_SOX15_04_M02903 TRANSFAC + 53459814 53459828 9.0E-06 TAAAATCACATTCCA 15 V_MEF2_01_M00006 TRANSFAC - 53456621 53456636 7.0E-06 CTCTAAAAATCCTTCC 16 V_CEBP_Q2_01_M00912 TRANSFAC + 53454351 53454362 8.0E-06 ATTTCATAATCC 8 V_CMAF_01_M01070 TRANSFAC - 53459845 53459863 4.0E-06 AAATGTGCTGAAACGACTA 19 V_IRXB3_01_M01377 TRANSFAC + 53454364 53454380 8.0E-06 AAAAAACATGTACTGCC 17 V_IRXB3_01_M01377 TRANSFAC + 53456136 53456152 3.0E-06 AAATATCATGTATAACT 17 V_ATF_B_M00338 TRANSFAC + 53459678 53459689 3.0E-06 TTGACGTCAAAG 12 V_CEBPE_01_M01772 TRANSFAC - 53454351 53454360 8.0E-06 ATTATGAAAT 6 V_RHOX11_06_M03100 TRANSFAC + 53459994 53460010 1.0E-06 TAACCGCTGTTAATGGA 17 V_ATATA_B_M00311 TRANSFAC - 53456285 53456294 7.0E-06 CTACTTAAGT 10 V_ATATA_B_M00311 TRANSFAC - 53456715 53456724 9.0E-06 TTACTTAAGT 10 V_BRCA_01_M01082 TRANSFAC - 53459183 53459190 1.0E-05 TTCTGTTG 8 V_BRCA_01_M01082 TRANSFAC + 53459979 53459986 1.0E-05 TTCTGTTG 8 V_CEBPG_Q6_01_M01869 TRANSFAC - 53454350 53454361 5.0E-06 GATTATGAAATG 7

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.