Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

LPIN1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 23175 lipin 1 chr2 + 11812704 - 11818204 11817704 Transcription Factor Binding Sites   Download all TFBS in the LPIN1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX - 11816337 11816352 5.0E-06 CTGCATTTTTAAATAT 16 CTCF_MA0139.1 JASPAR - 11822337 11822355 1.0E-06 TCACCTCCAGGGGGCGCTC 19 FOXL1_forkhead_full_dimeric_13_1 SELEX + 11820740 11820752 3.0E-06 TTTCAATAAACAG 13 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX + 11820658 11820671 9.0E-06 CAGGGCACAGGTCA 14 NR2F1_MA0017.1 JASPAR - 11816345 11816358 6.0E-06 TGACCTCTGCATTT 14 Klf4_MA0039.2 JASPAR + 11816027 11816036 1.0E-05 AGGGTGGGGC 10 Klf4_MA0039.2 JASPAR + 11820623 11820632 5.0E-06 TGGGTGGGGC 10 POU4F3_POU_DBD_monomeric_16_1 SELEX - 11816337 11816352 6.0E-06 CTGCATTTTTAAATAT 16 Ar_MA0007.1 JASPAR + 11820809 11820830 3.0E-06 ATGAGTACAGTGTGTTCCCCTA 22 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 11820741 11820751 9.0E-06 TTCAATAAACA 11 Pou2f2_POU_DBD_dimeric_14_1 SELEX + 11816332 11816345 9.0E-06 AGAGAATATTTAAA 14 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX + 11820658 11820672 9.0E-06 CAGGGCACAGGTCAA 15 CTCF_C2H2_full_monomeric_17_1 SELEX + 11822338 11822354 2.0E-06 AGCGCCCCCTGGAGGTG 17 NR3C2_nuclearreceptor_DBD_dimeric_17_1 SELEX + 11820811 11820827 0.0E+00 GAGTACAGTGTGTTCCC 17 NR3C2_nuclearreceptor_DBD_dimeric_17_1 SELEX - 11820811 11820827 0.0E+00 GGGAACACACTGTACTC 17 Lhx3_MA0135.1 JASPAR - 11816215 11816227 7.0E-06 GAATTTATTTTCT 13 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 11820741 11820751 4.0E-06 TTCAATAAACA 11 GSC_homeodomain_full_monomeric_10_1 SELEX + 11816286 11816295 4.0E-06 ACTAATCCCT 10 NR3C1_MA0113.1 JASPAR + 11816214 11816231 2.0E-06 GAGAAAATAAATTCCTGT 18 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 11816214 11816226 8.0E-06 GAGAAAATAAATT 13 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 11820739 11820751 2.0E-06 ATTTCAATAAACA 13 NR3C1_nuclearreceptor_DBD_dimeric_17_1 SELEX + 11820811 11820827 0.0E+00 GAGTACAGTGTGTTCCC 17 NR3C1_nuclearreceptor_DBD_dimeric_17_1 SELEX - 11820811 11820827 0.0E+00 GGGAACACACTGTACTC 17 TBX1_TBX_DBD_dimeric_20_1 SELEX + 11816484 11816503 8.0E-06 GGGTGTCAGAGAGAGAGAGA 20 POU4F1_POU_DBD_monomeric_14_1 SELEX - 11816339 11816352 8.0E-06 CTGCATTTTTAAAT 14 RREB1_MA0073.1 JASPAR - 11816467 11816486 7.0E-06 CCCACACACACACACACACA 20 RREB1_MA0073.1 JASPAR - 11816469 11816488 1.0E-06 CACCCACACACACACACACA 20 AR_nuclearreceptor_full_dimeric_17_1 SELEX + 11820811 11820827 0.0E+00 GAGTACAGTGTGTTCCC 17 AR_nuclearreceptor_full_dimeric_17_1 SELEX - 11820811 11820827 0.0E+00 GGGAACACACTGTACTC 17 V_FOXP1_01_M00987 TRANSFAC + 11816446 11816465 5.0E-06 ATGTGTGTGTGTGTGTGTGT 20 V_MEIS1_02_M01419 TRANSFAC - 11816274 11816289 4.0E-06 TAGTAACTGTCAAAGA 16 V_PREP1_01_M01459 TRANSFAC - 11816274 11816289 9.0E-06 TAGTAACTGTCAAAGA 16 V_APOLYA_B_M00310 TRANSFAC + 11816219 11816233 2.0E-06 AATAAATTCCTGTTG 15 V_NF1_Q6_01_M00806 TRANSFAC + 11816305 11816321 2.0E-06 TTGGTCTGATGCCAACA 17 V_NF1A_Q6_M02103 TRANSFAC + 11816305 11816320 5.0E-06 TTGGTCTGATGCCAAC 16 V_HMGIY_Q3_M01010 TRANSFAC - 11816217 11816231 5.0E-06 ACAGGAATTTATTTT 15 V_BCL6_01_M01183 TRANSFAC - 11816332 11816347 5.0E-06 TTTTTAAATATTCTCT 16 V_AR_Q6_01_M01996 TRANSFAC - 11820811 11820825 8.0E-06 GAACACACTGTACTC 15 V_FOXO3A_Q1_M01137 TRANSFAC + 11816215 11816226 3.0E-06 AGAAAATAAATT 12 V_EAR2_Q2_M01728 TRANSFAC - 11816345 11816358 9.0E-06 TGACCTCTGCATTT 14 V_PPAR_DR1_Q2_M00763 TRANSFAC - 11820659 11820671 3.0E-06 TGACCTGTGCCCT 13 V_AP4_Q6_02_M01860 TRANSFAC - 11820629 11820641 7.0E-06 CCAGCTGCAGCCC 13 V_NR3C1_01_M02219 TRANSFAC + 11816214 11816231 2.0E-06 GAGAAAATAAATTCCTGT 18 V_HBP1_Q2_M01661 TRANSFAC + 11820741 11820749 4.0E-06 TTCAATAAA 9 V_HELIOSA_01_M01003 TRANSFAC - 11816288 11816298 3.0E-06 CATAGGGATTA 11 V_MEF2A_Q6_M02024 TRANSFAC + 11816338 11816347 4.0E-06 TATTTAAAAA 10 V_TGIF2_01_M01407 TRANSFAC - 11816274 11816289 1.0E-06 TAGTAACTGTCAAAGA 16 V_NFY_C_M00209 TRANSFAC + 11821514 11821527 5.0E-06 TCTGGTTGGTTAAA 14 V_TRF1_01_M01237 TRANSFAC + 11816046 11816060 8.0E-06 ATAGGATTAGTGTTC 15 V_PITX1_Q6_M01826 TRANSFAC - 11816049 11816059 4.0E-06 AACACTAATCC 11 V_HMBOX1_01_M01456 TRANSFAC - 11816230 11816246 4.0E-06 ATAGACTGGTTAGCAAC 17 V_COMP1_01_M00057 TRANSFAC - 11821602 11821625 4.0E-06 AACTTACAATGACGGCAGAAGGCG 24 V_GC_01_M00255 TRANSFAC + 11820621 11820634 3.0E-06 AATGGGTGGGGCTG 14 V_MEIS2_01_M01488 TRANSFAC - 11816274 11816289 7.0E-06 TAGTAACTGTCAAAGA 16 V_POU3F2_01_M00463 TRANSFAC - 11816339 11816352 8.0E-06 CTGCATTTTTAAAT 14 V_COUP_01_M00158 TRANSFAC - 11816345 11816358 6.0E-06 TGACCTCTGCATTT 14 V_PXRRXR_02_M01153 TRANSFAC + 11820650 11820657 1.0E-05 AGAGTTCA 8 V_HNF3_Q6_M00791 TRANSFAC + 11820741 11820753 8.0E-06 TTCAATAAACAGA 13 V_OCT1_04_M00138 TRANSFAC + 11816331 11816353 1.0E-05 GAGAGAATATTTAAAAATGCAGA 23 V_AR_04_M01201 TRANSFAC + 11820812 11820826 5.0E-06 AGTACAGTGTGTTCC 15 V_AR_04_M01201 TRANSFAC - 11820812 11820826 0.0E+00 GGAACACACTGTACT 15 V_PPARG_03_M00528 TRANSFAC + 11820655 11820671 9.0E-06 TCACAGGGCACAGGTCA 17 V_RREB1_01_M00257 TRANSFAC - 11816474 11816487 6.0E-06 ACCCACACACACAC 14 V_TBP_06_M02814 TRANSFAC + 11816334 11816349 5.0E-06 AGAATATTTAAAAATG 16 V_CTCF_02_M01259 TRANSFAC - 11822339 11822358 2.0E-06 GTGTCACCTCCAGGGGGCGC 20 V_CTCF_01_M01200 TRANSFAC - 11822337 11822356 0.0E+00 GTCACCTCCAGGGGGCGCTC 20 V_MRG2_01_M01395 TRANSFAC - 11816274 11816289 5.0E-06 TAGTAACTGTCAAAGA 16 V_DR1_Q3_M00762 TRANSFAC + 11820659 11820671 4.0E-06 AGGGCACAGGTCA 13 V_FOXL1_02_M02857 TRANSFAC - 11816244 11816259 5.0E-06 ATAACAAAATACCATA 16 V_FOXL1_02_M02857 TRANSFAC - 11816249 11816264 7.0E-06 CTGCCATAACAAAATA 16 NR1H2_RXRA_MA0115.1 JASPAR + 11820657 11820673 3.0E-06 ACAGGGCACAGGTCAAG 17 V_PITX1_01_M01484 TRANSFAC - 11816283 11816299 7.0E-06 GCATAGGGATTAGTAAC 17 V_ESRRA_04_M02852 TRANSFAC + 11816347 11816363 8.0E-06 ATGCAGAGGTCATTCCC 17 V_DOBOX5_01_M01463 TRANSFAC - 11816282 11816298 3.0E-06 CATAGGGATTAGTAACT 17 V_OTX2_01_M01387 TRANSFAC - 11816282 11816298 4.0E-06 CATAGGGATTAGTAACT 17 V_OCT1_06_M00162 TRANSFAC - 11816336 11816349 5.0E-06 CATTTTTAAATATT 14 V_HSF_Q6_M00641 TRANSFAC + 11821625 11821637 4.0E-06 TTCCCGAGGTCTC 13 V_FOXJ2_01_M00422 TRANSFAC + 11820739 11820756 2.0E-06 ATTTCAATAAACAGAGCT 18 V_NFE2_Q6_M02104 TRANSFAC + 11816621 11816636 3.0E-06 CATGGGTCAGCTGACA 16 V_GSC_01_M01428 TRANSFAC + 11816282 11816298 1.0E-06 AGTTACTAATCCCTATG 17 V_PITX2_01_M01447 TRANSFAC - 11816282 11816298 2.0E-06 CATAGGGATTAGTAACT 17 V_PIT1_Q6_M00802 TRANSFAC - 11816336 11816353 3.0E-06 TCTGCATTTTTAAATATT 18 V_TCF3_05_M02920 TRANSFAC + 11816212 11816226 5.0E-06 GTGAGAAAATAAATT 15 V_COUP_DR1_Q6_M00765 TRANSFAC - 11820659 11820671 3.0E-06 TGACCTGTGCCCT 13 V_OTX1_01_M01366 TRANSFAC - 11816282 11816298 4.0E-06 CATAGGGATTAGTAACT 17 V_AR_01_M00481 TRANSFAC + 11820812 11820826 0.0E+00 AGTACAGTGTGTTCC 15 V_AR_01_M00481 TRANSFAC - 11820812 11820826 3.0E-06 GGAACACACTGTACT 15 V_AR_Q2_M00447 TRANSFAC - 11820812 11820826 7.0E-06 GGAACACACTGTACT 15 V_NF1_Q6_M00193 TRANSFAC - 11816304 11816321 8.0E-06 TGTTGGCATCAGACCAAA 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.