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RTF1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 23168 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) chr15 + 41704301 - 41709801 41709301 Transcription Factor Binding Sites   Download all TFBS in the RTF1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints KLF16_C2H2_DBD_monomeric_11_1 SELEX - 41709226 41709236 1.0E-05 GCCCCGCCCCC 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 41709280 41709290 1.0E-05 GCCCCGCCCCC 11 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 41710322 41710333 6.0E-06 TATATAAACAGT 12 FOXL1_forkhead_full_dimeric_13_1 SELEX - 41710323 41710335 2.0E-06 AGTATATAAACAG 13 PROP1_homeodomain_full_dimeric_11_1 SELEX + 41708797 41708807 8.0E-06 TAACTTTATTA 11 Foxq1_MA0040.1 JASPAR + 41710321 41710331 4.0E-06 AACTGTTTATA 11 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 41710324 41710334 4.0E-06 GTATATAAACA 11 SP1_MA0079.2 JASPAR - 41709226 41709235 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR - 41709280 41709289 7.0E-06 CCCCGCCCCC 10 DRGX_homeodomain_DBD_dimeric_13_1 SELEX + 41708796 41708808 8.0E-06 CTAACTTTATTAT 13 SP4_C2H2_full_monomeric_17_1 SELEX - 41709277 41709293 1.0E-06 CTGGCCCCGCCCCCTGC 17 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 41710324 41710334 5.0E-06 GTATATAAACA 11 CART1_homeodomain_DBD_dimeric_13_1 SELEX + 41708796 41708808 1.0E-05 CTAACTTTATTAT 13 HOXA13_homeodomain_full_monomeric_11_1 SELEX + 41710004 41710014 1.0E-05 ACTCGTAAATG 11 ZNF410_C2H2_DBD_monomeric_17_1 SELEX + 41710243 41710259 1.0E-05 AGCATCCCAGAATTCTT 17 NRF1_NRF_full_dimeric_12_1 SELEX - 41709309 41709320 2.0E-06 CGCGCATGCGCG 12 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 41710324 41710336 3.0E-06 GAGTATATAAACA 13 Zfx_MA0146.1 JASPAR + 41709685 41709698 4.0E-06 CCGGCCCGGGCCTG 14 V_HNF3B_01_M00131 TRANSFAC + 41710319 41710333 0.0E+00 TGAACTGTTTATATA 15 V_ZFX_01_M01593 TRANSFAC + 41709516 41709531 1.0E-06 GGGCAGGCCGCGGAGG 16 V_SP1_Q6_01_M00931 TRANSFAC + 41709227 41709236 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 41709281 41709290 4.0E-06 GGGGCGGGGC 10 V_SP1_03_M02281 TRANSFAC - 41709226 41709235 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC - 41709280 41709289 7.0E-06 CCCCGCCCCC 10 V_GKLF_02_M01588 TRANSFAC - 41709235 41709246 8.0E-06 GCCCCGCCCTGC 12 V_TCFAP2E_04_M02926 TRANSFAC + 41710163 41710176 1.0E-06 TACTGGAAGAAATA 14 V_HOXA13_03_M01430 TRANSFAC + 41710001 41710016 5.0E-06 GACACTCGTAAATGTT 16 V_GC_01_M00255 TRANSFAC - 41709202 41709215 9.0E-06 GAGAGGCGGGGCCT 14 V_GC_01_M00255 TRANSFAC + 41709279 41709292 3.0E-06 AGGGGGCGGGGCCA 14 V_TGIF_02_M01346 TRANSFAC - 41708894 41708910 3.0E-06 GCGAATGACAGCTGAGC 17 V_ZBTB7B_04_M02930 TRANSFAC + 41709422 41709438 1.0E-05 CGGGGGACCACCATGGT 17 V_SP4_03_M02810 TRANSFAC - 41709275 41709291 2.0E-06 GGCCCCGCCCCCTGCTC 17 V_KROX_Q6_M00982 TRANSFAC - 41709221 41709234 4.0E-06 CCCGCCCCCGACGC 14 V_SP1_Q6_M00196 TRANSFAC + 41709279 41709291 0.0E+00 AGGGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC + 41709293 41709305 6.0E-06 GGGGGGCGGAGCG 13 V_CDX2_01_M01449 TRANSFAC - 41708797 41708812 8.0E-06 GGCGATAATAAAGTTA 16 V_AHR_01_M00139 TRANSFAC - 41709212 41709229 7.0E-06 CCCCGACGCAGCGTGAGA 18 V_SP1SP3_Q4_M01219 TRANSFAC - 41709277 41709287 8.0E-06 CCGCCCCCTGC 11 V_RREB1_01_M00257 TRANSFAC + 41710124 41710137 1.0E-06 ACCCAAAAAAACAC 14 V_HFH1_01_M00129 TRANSFAC + 41710321 41710332 1.0E-06 AACTGTTTATAT 12 V_TGIF1_01_M03111 TRANSFAC - 41708894 41708910 3.0E-06 GCGAATGACAGCTGAGC 17 V_TBX5_01_M01019 TRANSFAC + 41710113 41710124 5.0E-06 TGAGGTGTCAGA 12 V_SP4_Q5_M01273 TRANSFAC - 41709226 41709236 1.0E-06 GCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC - 41709280 41709290 1.0E-06 GCCCCGCCCCC 11 V_HFH8_01_M00294 TRANSFAC + 41710321 41710333 1.0E-06 AACTGTTTATATA 13 V_MYOD_Q6_02_M02100 TRANSFAC + 41708897 41708905 4.0E-06 CAGCTGTCA 9 V_ZFP206_01_M01742 TRANSFAC + 41709309 41709319 2.0E-06 CGCGCATGCGC 11 V_ZFP206_01_M01742 TRANSFAC - 41709310 41709320 2.0E-06 CGCGCATGCGC 11 V_NRF1_Q6_M00652 TRANSFAC - 41709309 41709318 4.0E-06 CGCATGCGCG 10 V_NRF1_Q6_M00652 TRANSFAC + 41709311 41709320 4.0E-06 CGCATGCGCG 10 V_T3RBETA_Q6_01_M02119 TRANSFAC + 41709505 41709521 9.0E-06 GGATCAGGTGAGGGCAG 17 V_HFH3_01_M00289 TRANSFAC + 41710321 41710333 9.0E-06 AACTGTTTATATA 13 V_FOXJ2_01_M00422 TRANSFAC - 41710319 41710336 7.0E-06 GAGTATATAAACAGTTCA 18 V_SP1_Q2_01_M00933 TRANSFAC - 41709226 41709235 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC - 41709280 41709289 4.0E-06 CCCCGCCCCC 10 V_UF1H3BETA_Q6_M01068 TRANSFAC + 41709223 41709236 5.0E-06 GTCGGGGGCGGGGC 14 V_SP1_Q4_01_M00932 TRANSFAC + 41709225 41709237 9.0E-06 CGGGGGCGGGGCA 13 V_SP1_Q4_01_M00932 TRANSFAC + 41709279 41709291 0.0E+00 AGGGGGCGGGGCC 13

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