Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ARHGAP26 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 23092 Rho GTPase activating protein 26 chr5 + 142145291 - 142150791 142150291 Transcription Factor Binding Sites   Download all TFBS in the ARHGAP26 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SP8_C2H2_DBD_monomeric_12_1 SELEX + 142149783 142149794 3.0E-06 GCCACGCCCCCA 12 SP8_C2H2_DBD_monomeric_12_1 SELEX - 142150745 142150756 6.0E-06 CCCACGCCCACC 12 HSF2_HSF_DBD_trimeric_13_1 SELEX - 142147620 142147632 1.0E-06 TTCCAGAAAGTTC 13 PITX3_homeodomain_DBD_monomeric_9_1 SELEX - 142149907 142149915 5.0E-06 CTTAATCCC 9 SP3_C2H2_DBD_monomeric_11_1 SELEX + 142149783 142149793 3.0E-06 GCCACGCCCCC 11 SP3_C2H2_DBD_monomeric_11_1 SELEX - 142150746 142150756 2.0E-06 CCCACGCCCAC 11 Foxk1_forkhead_DBD_putatively-multimeric_11_1 SELEX - 142152679 142152689 3.0E-06 AGGACACAATG 11 SOX10_HMG_full_dimeric_15_3 SELEX + 142152688 142152702 5.0E-06 CTGGATTTCAGACAT 15 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 142149783 142149793 1.0E-06 GCCACGCCCCC 11 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 142151688 142151698 3.0E-06 TTTAAAGGGCA 11 HSF1_HSF_full_trimeric_13_1 SELEX - 142147620 142147632 1.0E-06 TTCCAGAAAGTTC 13 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 142151171 142151182 1.0E-06 TTTAAAAATAGA 12 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 142152654 142152665 0.0E+00 TCTAAAAATAGA 12 KLF14_C2H2_DBD_monomeric_14_1 SELEX + 142149782 142149795 5.0E-06 GGCCACGCCCCCAG 14 Foxj3_forkhead_DBD_putatively-multimeric_11_1 SELEX - 142152680 142152690 4.0E-06 CAGGACACAAT 11 TBX20_TBX_DBD_dimeric_19_1 SELEX - 142151720 142151738 7.0E-06 AGCTGACAAAATGACATCT 19 HLF_bZIP_full_dimeric_12_1 SELEX - 142149256 142149267 1.0E-05 TTTTACATAATA 12 POU1F1_POU_DBD_monomeric_14_1 SELEX + 142147736 142147749 1.0E-06 TCTATGCTAATGAG 14 POU1F1_POU_DBD_monomeric_14_1 SELEX + 142149257 142149270 5.0E-06 ATTATGTAAAATTG 14 POU1F1_POU_DBD_monomeric_14_1 SELEX + 142149431 142149444 5.0E-06 AAGATGCAAATAAC 14 NFYA_MA0060.1 JASPAR - 142149889 142149904 3.0E-06 CCGGGCCAATCAGCGC 16 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 142151171 142151182 1.0E-06 TTTAAAAATAGA 12 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 142152654 142152665 0.0E+00 TCTAAAAATAGA 12 EGR1_C2H2_full_monomeric_14_1 SELEX - 142150747 142150760 6.0E-06 CACGCCCACGCCCA 14 POU2F2_POU_DBD_monomeric_11_1 SELEX + 142147737 142147747 9.0E-06 CTATGCTAATG 11 POU2F2_POU_DBD_monomeric_11_1 SELEX + 142149258 142149268 7.0E-06 TTATGTAAAAT 11 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 142149438 142149451 3.0E-06 AAATAACATTTTTC 14 Pax4_MA0068.1 JASPAR + 142151177 142151206 7.0E-06 AATAGAATGTACATATCCCAACTCTCTCCC 30 PITX1_homeodomain_full_monomeric_8_1 SELEX - 142149907 142149914 1.0E-05 TTAATCCC 8 FOXK1_forkhead_DBD_putatively-multimeric_10_1 SELEX - 142152680 142152689 5.0E-06 AGGACACAAT 10 MEF2B_MADS_full_dimeric_12_1 SELEX + 142151171 142151182 5.0E-06 TTTAAAAATAGA 12 MEF2B_MADS_full_dimeric_12_1 SELEX + 142152654 142152665 0.0E+00 TCTAAAAATAGA 12 POU3F3_POU_DBD_monomeric_13_1 SELEX + 142147736 142147748 8.0E-06 TCTATGCTAATGA 13 POU3F3_POU_DBD_monomeric_13_1 SELEX + 142149257 142149269 1.0E-06 ATTATGTAAAATT 13 POU3F3_POU_DBD_monomeric_13_1 SELEX + 142149431 142149443 4.0E-06 AAGATGCAAATAA 13 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 142149438 142149451 7.0E-06 AAATAACATTTTTC 14 MEF2A_MA0052.1 JASPAR - 142151172 142151181 3.0E-06 CTATTTTTAA 10 MEF2A_MA0052.1 JASPAR - 142152655 142152664 1.0E-06 CTATTTTTAG 10 HSF4_HSF_DBD_trimeric_13_1 SELEX - 142147620 142147632 0.0E+00 TTCCAGAAAGTTC 13 EGR2_C2H2_full_monomeric_15_1 SELEX - 142150747 142150761 5.0E-06 GCACGCCCACGCCCA 15 FOXG1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 142150828 142150839 7.0E-06 GTGGACACGATG 12 FOXG1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 142152679 142152690 4.0E-06 CAGGACACAATG 12 Egr3_C2H2_DBD_monomeric_15_1 SELEX - 142150746 142150760 5.0E-06 CACGCCCACGCCCAC 15 SP1_C2H2_DBD_monomeric_11_1 SELEX + 142149783 142149793 5.0E-06 GCCACGCCCCC 11 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX - 142150849 142150861 9.0E-06 TGCCCCTAAGGGA 13 NFIL3_bZIP_DBD_dimeric_12_1 SELEX - 142149256 142149267 1.0E-05 TTTTACATAATA 12 TEAD3_TEA_DBD_dimeric_17_1 SELEX + 142152690 142152706 9.0E-06 GGATTTCAGACATTCCG 17 POU3F1_POU_DBD_monomeric_12_1 SELEX + 142147737 142147748 7.0E-06 CTATGCTAATGA 12 POU3F1_POU_DBD_monomeric_12_1 SELEX + 142149258 142149269 3.0E-06 TTATGTAAAATT 12 RHOXF1_homeodomain_full_monomeric_8_1 SELEX - 142149907 142149914 1.0E-05 TTAATCCC 8 Klf12_C2H2_DBD_monomeric_15_1 SELEX + 142149782 142149796 1.0E-05 GGCCACGCCCCCAGC 15 TFAP2B_TFAP_DBD_dimeric_13_1 SELEX - 142150849 142150861 8.0E-06 TGCCCCTAAGGGA 13 DUXA_homeodomain_DBD_dimeric_13_1 SELEX - 142149821 142149833 1.0E-06 TTGATCCAATCAA 13 Pou5f1_MA0142.1 JASPAR + 142149253 142149267 8.0E-06 TCTTATTATGTAAAA 15 Pou5f1_MA0142.1 JASPAR + 142149427 142149441 0.0E+00 TTTTAAGATGCAAAT 15 POU2F1_POU_DBD_monomeric_12_1 SELEX + 142149257 142149268 2.0E-06 ATTATGTAAAAT 12 POU2F1_POU_DBD_monomeric_12_1 SELEX + 142149431 142149442 1.0E-05 AAGATGCAAATA 12 TEAD1_TEA_full_dimeric_17_1 SELEX + 142152690 142152706 7.0E-06 GGATTTCAGACATTCCG 17 GSC2_homeodomain_DBD_monomeric_10_1 SELEX - 142149906 142149915 2.0E-06 CTTAATCCCC 10 EGR2_C2H2_DBD_monomeric_11_1 SELEX - 142150749 142150759 7.0E-06 ACGCCCACGCC 11 POU3F2_POU_DBD_monomeric_12_1 SELEX + 142147737 142147748 3.0E-06 CTATGCTAATGA 12 POU3F2_POU_DBD_monomeric_12_1 SELEX + 142149258 142149269 7.0E-06 TTATGTAAAATT 12 V_CDP_03_M01342 TRANSFAC + 142152630 142152646 3.0E-06 ACTACTTGATCAGGTCA 17 V_MEIS1_02_M01419 TRANSFAC - 142151727 142151742 5.0E-06 AACAAGCTGACAAAAT 16 V_E2A_Q6_01_M02088 TRANSFAC - 142150766 142150778 1.0E-05 GGACACCTGCGTG 13 V_OBOX5_05_M03066 TRANSFAC + 142149903 142149919 4.0E-06 GGCGGGGATTAAGTCAT 17 V_DUXL_01_M01390 TRANSFAC - 142149816 142149832 4.0E-06 TGATCCAATCAAAGGGG 17 V_BTEB3_Q5_M01865 TRANSFAC + 142152662 142152674 5.0E-06 TAGAGGGTGGAGT 13 V_SOX14_05_M02902 TRANSFAC - 142152675 142152689 2.0E-06 AGGACACAATGGTTG 15 V_SREBP2_Q6_M01177 TRANSFAC - 142152643 142152654 1.0E-06 AGGTCACCTGAC 12 V_CEBP_Q3_M00770 TRANSFAC + 142149255 142149266 8.0E-06 TTATTATGTAAA 12 V_ZFX_01_M01593 TRANSFAC + 142150278 142150293 6.0E-06 GCCCGGGCCCCGGCGG 16 V_ZEC_01_M01081 TRANSFAC + 142150937 142150949 3.0E-06 AAAGGTGGGTTGT 13 V_HMGIY_Q3_M01010 TRANSFAC - 142149180 142149194 3.0E-06 CCTGCAATTTTCTTG 15 V_MTF1_Q4_M00650 TRANSFAC - 142149680 142149693 2.0E-06 TGTGCACCCGCCCC 14 V_DEAF1_02_M01002 TRANSFAC + 142149476 142149500 4.0E-06 GGTCGCTCGGGATTCTCCCGGAGCA 25 V_MMEF2_Q6_M00405 TRANSFAC + 142151168 142151183 5.0E-06 GGGTTTAAAAATAGAA 16 V_POU5F1_02_M02245 TRANSFAC + 142149253 142149267 8.0E-06 TCTTATTATGTAAAA 15 V_POU5F1_02_M02245 TRANSFAC + 142149427 142149441 0.0E+00 TTTTAAGATGCAAAT 15 V_FOXJ2_02_M00423 TRANSFAC + 142149437 142149450 1.0E-06 CAAATAACATTTTT 14 V_OCT1_Q5_01_M00930 TRANSFAC - 142149433 142149443 7.0E-06 TTATTTGCATC 11 V_MEF2_02_M00231 TRANSFAC + 142151165 142151186 0.0E+00 CGAGGGTTTAAAAATAGAATGT 22 V_MEF2_02_M00231 TRANSFAC + 142152648 142152669 4.0E-06 GTGACCTCTAAAAATAGAGGGT 22 V_NR2F2_03_M02783 TRANSFAC - 142152645 142152660 6.0E-06 TTTTAGAGGTCACCTG 16 V_MEIS1AHOXA9_01_M00420 TRANSFAC - 142147703 142147716 2.0E-06 TGACAGTTTACAAA 14 V_NFAT3_Q3_M01734 TRANSFAC - 142149286 142149295 3.0E-06 TTATTTTCCT 10 V_OCT1_01_M00135 TRANSFAC + 142149254 142149272 4.0E-06 CTTATTATGTAAAATTGTG 19 V_POU2F3_01_M01476 TRANSFAC + 142147735 142147750 1.0E-06 CTCTATGCTAATGAGC 16 V_POU2F3_01_M01476 TRANSFAC + 142149430 142149445 4.0E-06 TAAGATGCAAATAACA 16 V_ATF3_Q6_01_M01863 TRANSFAC + 142149910 142149920 2.0E-06 ATTAAGTCATC 11 V_CEBP_Q2_M00190 TRANSFAC - 142149255 142149268 9.0E-06 ATTTTACATAATAA 14 V_CUX1_03_M02958 TRANSFAC + 142152630 142152646 3.0E-06 ACTACTTGATCAGGTCA 17 V_OCT_C_M00210 TRANSFAC - 142147737 142147749 2.0E-06 CTCATTAGCATAG 13 V_CDX_Q5_M00991 TRANSFAC + 142150419 142150436 2.0E-06 GACCAACAAATTCATCAA 18 V_MEF2A_Q6_M02024 TRANSFAC - 142151171 142151180 1.0E-06 TATTTTTAAA 10 V_MEF2A_Q6_M02024 TRANSFAC - 142152654 142152663 0.0E+00 TATTTTTAGA 10 V_PAX_Q6_M00808 TRANSFAC - 142147664 142147674 1.0E-05 CTGGAAGTTAC 11 V_TGIF2_01_M01407 TRANSFAC - 142151727 142151742 5.0E-06 AACAAGCTGACAAAAT 16 V_ROAZ_01_M00467 TRANSFAC - 142150869 142150882 7.0E-06 GCACTCAAGGCTGA 14 V_GC_01_M00255 TRANSFAC + 142149742 142149755 3.0E-06 AGGAGGCGGAGTTT 14 V_OBOX5_02_M01480 TRANSFAC + 142149903 142149919 4.0E-06 GGCGGGGATTAAGTCAT 17 V_MEIS2_01_M01488 TRANSFAC - 142151727 142151742 8.0E-06 AACAAGCTGACAAAAT 16 V_TGIF_02_M01346 TRANSFAC + 142151726 142151742 9.0E-06 CATTTTGTCAGCTTGTT 17 V_CEBPE_Q6_M01868 TRANSFAC - 142151628 142151641 9.0E-06 CAAGATTTCTTAGC 14 V_ZFP105_03_M02827 TRANSFAC + 142149435 142149449 6.0E-06 TGCAAATAACATTTT 15 V_OCT1_03_M00137 TRANSFAC + 142149311 142149323 2.0E-06 CTAGTAATGATGT 13 V_RXRA_03_M02791 TRANSFAC + 142152644 142152660 7.0E-06 TCAGGTGACCTCTAAAA 17 V_POLY_C_M00212 TRANSFAC - 142149496 142149513 1.0E-05 AAATACAGCCCCCTGCTC 18 V_HIC1_03_M01073 TRANSFAC + 142150547 142150564 1.0E-06 CCGGGTTGCCCGCGCGTC 18 V_SP4_03_M02810 TRANSFAC - 142149389 142149405 7.0E-06 CTTCCCGCCCCCTACGG 17 V_KROX_Q6_M00982 TRANSFAC - 142149674 142149687 2.0E-06 CCCGCCCCCGCTAC 14 V_RSRFC4_Q2_M00407 TRANSFAC + 142151169 142151185 0.0E+00 GGTTTAAAAATAGAATG 17 V_OLF1_01_M00261 TRANSFAC + 142151025 142151046 4.0E-06 TGCGATTCCTTGGAGTATTGGC 22 V_AMEF2_Q6_M00403 TRANSFAC - 142147607 142147624 4.0E-06 AGTTCTAAATAACCCACC 18 V_AP1_Q6_01_M00925 TRANSFAC - 142149911 142149919 9.0E-06 ATGACTTAA 9 V_EGR1_Q6_M01873 TRANSFAC + 142149677 142149686 4.0E-06 GCGGGGGCGG 10 V_PAX5_01_M00143 TRANSFAC + 142150862 142150889 9.0E-06 GAGTTGCTCAGCCTTGAGTGCCCAACCG 28 V_MEF2_03_M00232 TRANSFAC + 142151165 142151186 1.0E-06 CGAGGGTTTAAAAATAGAATGT 22 V_MEF2_03_M00232 TRANSFAC + 142152648 142152669 9.0E-06 GTGACCTCTAAAAATAGAGGGT 22 V_NFE4_Q5_M02105 TRANSFAC - 142149878 142149889 9.0E-06 CACCCTCCCCTG 12 V_NFE4_Q5_M02105 TRANSFAC + 142151202 142151213 2.0E-06 CTCCCTCTCCTG 12 V_DUXBL_01_M02968 TRANSFAC - 142149816 142149832 4.0E-06 TGATCCAATCAAAGGGG 17 V_IRF3_06_M02871 TRANSFAC + 142150890 142150903 5.0E-06 TGAGAATGGAGCGT 14 V_OCT1_04_M00138 TRANSFAC + 142149252 142149274 9.0E-06 ATCTTATTATGTAAAATTGTGCT 23 V_OCT1_04_M00138 TRANSFAC + 142149426 142149448 1.0E-06 ATTTTAAGATGCAAATAACATTT 23 V_EVI1_Q3_M02002 TRANSFAC - 142149178 142149186 6.0E-06 TTTCTTGTC 9 V_MEF2_04_M00233 TRANSFAC + 142151165 142151186 3.0E-06 CGAGGGTTTAAAAATAGAATGT 22 V_MEF2_Q6_01_M00941 TRANSFAC - 142151172 142151183 2.0E-06 TTCTATTTTTAA 12 V_VMYB_01_M00003 TRANSFAC - 142151238 142151247 6.0E-06 GATAACGGAA 10 V_HIC1_02_M01072 TRANSFAC + 142150547 142150561 6.0E-06 CCGGGTTGCCCGCGC 15 V_TGIF1_01_M03111 TRANSFAC + 142151726 142151742 9.0E-06 CATTTTGTCAGCTTGTT 17 V_EGR2_01_M00246 TRANSFAC + 142150748 142150759 6.0E-06 GGGCGTGGGCGT 12 V_OCT_Q6_M00795 TRANSFAC - 142149433 142149443 5.0E-06 TTATTTGCATC 11 V_NEUROD_02_M01288 TRANSFAC - 142150121 142150132 7.0E-06 GTGCTGCTGTTC 12 V_VBP_01_M00228 TRANSFAC - 142149257 142149266 9.0E-06 TTTACATAAT 10 V_ZFP187_04_M02934 TRANSFAC + 142149564 142149579 6.0E-06 CAGCCCTAGTCCCCAG 16 V_NFYC_Q5_M02107 TRANSFAC - 142149889 142149902 0.0E+00 GGGCCAATCAGCGC 14 V_POU5F1_01_M01307 TRANSFAC + 142149433 142149442 9.0E-06 GATGCAAATA 10 V_CEBPA_01_M00116 TRANSFAC - 142149255 142149268 3.0E-06 ATTTTACATAATAA 14 V_OSR2_04_M02889 TRANSFAC + 142152626 142152641 6.0E-06 AACTACTACTTGATCA 16 V_OCT2_01_M01368 TRANSFAC + 142147735 142147750 1.0E-06 CTCTATGCTAATGAGC 16 V_OCT2_01_M01368 TRANSFAC + 142149430 142149445 5.0E-06 TAAGATGCAAATAACA 16 V_CAAT_C_M00200 TRANSFAC - 142149876 142149900 1.0E-06 GCCAATCAGCGCACCCTCCCCTGCC 25 V_OCT1_Q6_M00195 TRANSFAC + 142149430 142149444 3.0E-06 TAAGATGCAAATAAC 15 V_EBNA1_01_M01745 TRANSFAC + 142150366 142150381 4.0E-06 GATAGTCCGCACTTCC 16 V_CPHX_01_M01478 TRANSFAC - 142149820 142149833 0.0E+00 TTGATCCAATCAAA 14 V_CPHX_01_M01478 TRANSFAC + 142149821 142149834 4.0E-06 TTGATTGGATCAAG 14 V_NFY_01_M00287 TRANSFAC - 142149889 142149904 2.0E-06 CCGGGCCAATCAGCGC 16 V_NRF2_01_M00108 TRANSFAC - 142151235 142151244 6.0E-06 AACGGAAGAG 10 V_DOBOX5_01_M01463 TRANSFAC + 142149903 142149919 4.0E-06 GGCGGGGATTAAGTCAT 17 V_RSRFC4_01_M00026 TRANSFAC + 142151169 142151184 6.0E-06 GGTTTAAAAATAGAAT 16 V_RSRFC4_01_M00026 TRANSFAC - 142151169 142151184 0.0E+00 ATTCTATTTTTAAACC 16 V_RSRFC4_01_M00026 TRANSFAC - 142152652 142152667 3.0E-06 CCTCTATTTTTAGAGG 16 V_TBP_04_M02918 TRANSFAC - 142151682 142151696 6.0E-06 CCCTTTAAAGAGGCC 15 V_EGR1_06_M02744 TRANSFAC - 142149674 142149687 6.0E-06 CCCGCCCCCGCTAC 14 V_OSR1_04_M02888 TRANSFAC + 142152626 142152641 1.0E-05 AACTACTACTTGATCA 16 V_RARA_03_M02787 TRANSFAC - 142152645 142152660 1.0E-06 TTTTAGAGGTCACCTG 16 V_HSF2_02_M01244 TRANSFAC + 142147620 142147632 0.0E+00 GAACTTTCTGGAA 13 V_YY1_01_M00059 TRANSFAC - 142151745 142151761 4.0E-06 TCTCTTCATTTTTAGAA 17 V_HMEF2_Q6_M00406 TRANSFAC - 142147609 142147624 2.0E-06 AGTTCTAAATAACCCA 16 V_CEBP_Q2_01_M00912 TRANSFAC - 142149255 142149266 3.0E-06 TTTACATAATAA 12 V_MAFK_04_M02880 TRANSFAC + 142149181 142149195 5.0E-06 AAGAAAATTGCAGGG 15 V_NFYA_Q5_M02106 TRANSFAC - 142149889 142149902 3.0E-06 GGGCCAATCAGCGC 14 V_OBOX5_01_M01381 TRANSFAC + 142149903 142149919 1.0E-05 GGCGGGGATTAAGTCAT 17 V_OBOX3_02_M03065 TRANSFAC + 142149902 142149918 4.0E-06 CGGCGGGGATTAAGTCA 17 V_LTF_Q6_M01692 TRANSFAC + 142149195 142149203 6.0E-06 GGCACTTGC 9 V_OTX1_01_M01366 TRANSFAC + 142149903 142149919 3.0E-06 GGCGGGGATTAAGTCAT 17 V_OBOX6_06_M03067 TRANSFAC - 142149903 142149919 1.0E-05 ATGACTTAATCCCCGCC 17 V_MIF1_01_M00279 TRANSFAC + 142149684 142149701 2.0E-06 CGGGTGCACAGCAACGCT 18 V_OBOX3_01_M01466 TRANSFAC + 142149902 142149918 4.0E-06 CGGCGGGGATTAAGTCA 17 V_PAX4_04_M00380 TRANSFAC + 142151176 142151205 2.0E-06 AAATAGAATGTACATATCCCAACTCTCTCC 30 V_EGR3_01_M00245 TRANSFAC + 142150748 142150759 4.0E-06 GGGCGTGGGCGT 12 V_OCT4_01_M01125 TRANSFAC + 142149427 142149441 0.0E+00 TTTTAAGATGCAAAT 15 V_TCF11_01_M00285 TRANSFAC + 142151724 142151736 0.0E+00 GTCATTTTGTCAG 13 V_HSF1_Q6_01_M02017 TRANSFAC + 142147620 142147633 0.0E+00 GAACTTTCTGGAAA 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.