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ZC3H13 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 23091 zinc finger CCCH-type containing 13 chr13 - 46626394 - 46631894 46626894 Transcription Factor Binding Sites   Download all TFBS in the ZC3H13 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX + 46631549 46631559 9.0E-06 AATGAGTCACT 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 46631549 46631559 7.0E-06 AGTGACTCATT 11 HOXD12_homeodomain_DBD_monomeric_9_1 SELEX - 46627114 46627122 1.0E-06 GTAATAAAA 9 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX - 46627113 46627122 0.0E+00 GTAATAAAAA 10 SOX21_HMG_DBD_dimeric_15_1 SELEX - 46631617 46631631 9.0E-06 GACAGTGGAAGTGTT 15 EVX2_homeodomain_DBD_monomeric_10_1 SELEX - 46627289 46627298 1.0E-05 GGTAATTAGG 10 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 46627081 46627098 2.0E-06 CCAATTAAAAGTGAATTT 18 MYF6_bHLH_full_dimeric_10_1 SELEX + 46627139 46627148 1.0E-06 AACAGCTGTT 10 MYF6_bHLH_full_dimeric_10_1 SELEX - 46627139 46627148 1.0E-06 AACAGCTGTT 10 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX - 46627113 46627122 1.0E-06 GTAATAAAAA 10 EN2_homeodomain_full_monomeric_10_1 SELEX + 46627289 46627298 1.0E-05 CCTAATTACC 10 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 46627082 46627098 2.0E-06 CAATTAAAAGTGAATTT 17 ZNF713_C2H2_full_monomeric_17_1 SELEX + 46626336 46626352 4.0E-06 TAGACAAATGCCAGAAT 17 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 46627116 46627129 6.0E-06 GAATTATGTAATAA 14 SOX2_HMG_full_dimeric_17_1 SELEX + 46631616 46631632 4.0E-06 TAACACTTCCACTGTCT 17 NHLH1_MA0048.1 JASPAR - 46627221 46627232 1.0E-05 GCTCAGCTGCTC 12 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 46627248 46627264 8.0E-06 GTCAAAAACGACAAACA 17 TEF_bZIP_DBD_dimeric_12_1 SELEX + 46627117 46627128 1.0E-06 TATTACATAATT 12 TEF_bZIP_DBD_dimeric_12_1 SELEX - 46627117 46627128 4.0E-06 AATTATGTAATA 12 SOX9_HMG_full_dimeric_17_3 SELEX - 46631509 46631525 7.0E-06 AATAAAATATAGTCACA 17 ZNF435_C2H2_full_dimeric_18_1 SELEX + 46627211 46627228 7.0E-06 AGTGTTTATTGAGCAGCT 18 HLF_bZIP_full_dimeric_12_1 SELEX + 46627117 46627128 0.0E+00 TATTACATAATT 12 HLF_bZIP_full_dimeric_12_1 SELEX - 46627117 46627128 2.0E-06 AATTATGTAATA 12 SOX7_HMG_full_dimeric_17_2 SELEX - 46631509 46631525 7.0E-06 AATAAAATATAGTCACA 17 Sox17_HMG_DBD_dimeric_15_1 SELEX + 46631617 46631631 7.0E-06 AACACTTCCACTGTC 15 DBP_bZIP_full_dimeric_12_1 SELEX + 46627117 46627128 2.0E-06 TATTACATAATT 12 DBP_bZIP_full_dimeric_12_1 SELEX - 46627117 46627128 0.0E+00 AATTATGTAATA 12 MSX1_homeodomain_full_monomeric_8_1 SELEX + 46627081 46627088 7.0E-06 CCAATTAA 8 Pax4_MA0068.1 JASPAR - 46627091 46627120 5.0E-06 AATAAAAAGAGAAAACTCACTTAAATTCAC 30 MSX2_homeodomain_DBD_monomeric_8_1 SELEX + 46627081 46627088 7.0E-06 CCAATTAA 8 Hoxc10_homeodomain_DBD_monomeric_10_1 SELEX - 46627113 46627122 7.0E-06 GTAATAAAAA 10 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 46627114 46627123 1.0E-06 TGTAATAAAA 10 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX - 46627114 46627122 1.0E-06 GTAATAAAA 9 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 46627213 46627223 9.0E-06 CTCAATAAACA 11 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 46627081 46627090 7.0E-06 CCAATTAAAA 10 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX - 46627113 46627122 2.0E-06 GTAATAAAAA 10 FIGLA_bHLH_DBD_dimeric_10_1 SELEX + 46627139 46627148 9.0E-06 AACAGCTGTT 10 FIGLA_bHLH_DBD_dimeric_10_1 SELEX - 46627139 46627148 9.0E-06 AACAGCTGTT 10 HOXC11_homeodomain_full_monomeric_11_2 SELEX - 46627113 46627123 1.0E-06 TGTAATAAAAA 11 Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 46627139 46627148 3.0E-06 AACAGCTGTT 10 Ascl2_bHLH_DBD_dimeric_10_1 SELEX - 46627139 46627148 3.0E-06 AACAGCTGTT 10 Tcf21_bHLH_DBD_dimeric_14_1 SELEX + 46627137 46627150 0.0E+00 TAAACAGCTGTTGT 14 Tcf21_bHLH_DBD_dimeric_14_1 SELEX - 46627137 46627150 0.0E+00 ACAACAGCTGTTTA 14 ELK1_ETS_full_dimeric_17_1 SELEX - 46626857 46626873 3.0E-06 GACTTCCGGCGGCATTT 17 SOX18_HMG_full_dimeric_15_1 SELEX - 46631617 46631631 6.0E-06 GACAGTGGAAGTGTT 15 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 46627213 46627223 7.0E-06 CTCAATAAACA 11 SOX7_HMG_full_dimeric_16_1 SELEX + 46627208 46627223 4.0E-06 AACAGTGTTTATTGAG 16 SOX7_HMG_full_dimeric_17_1 SELEX - 46631616 46631632 8.0E-06 AGACAGTGGAAGTGTTA 17 HOXA13_homeodomain_full_monomeric_10_1 SELEX - 46627113 46627122 3.0E-06 GTAATAAAAA 10 NFIL3_bZIP_DBD_dimeric_12_1 SELEX + 46627117 46627128 0.0E+00 TATTACATAATT 12 NFIL3_bZIP_DBD_dimeric_12_1 SELEX - 46627117 46627128 9.0E-06 AATTATGTAATA 12 BSX_homeodomain_DBD_monomeric_8_1 SELEX + 46627081 46627088 7.0E-06 CCAATTAA 8 GSX2_homeodomain_DBD_monomeric_10_1 SELEX + 46627080 46627089 6.0E-06 CCCAATTAAA 10 RFX4_RFX_DBD_dimeric_15_1 SELEX + 46631553 46631567 1.0E-05 AGTCACTAAGAAACA 15 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 46627081 46627098 2.0E-06 CCAATTAAAAGTGAATTT 18 HESX1_homeodomain_DBD_dimeric_15_1 SELEX - 46627074 46627088 1.0E-06 TTAATTGGGAATTTT 15 LHX9_homeodomain_DBD_dimeric_13_1 SELEX + 46627075 46627087 7.0E-06 AAATTCCCAATTA 13 EN1_homeodomain_full_dimeric_14_1 SELEX + 46627116 46627129 8.0E-06 TTATTACATAATTC 14 Msx3_homeodomain_DBD_monomeric_8_1 SELEX + 46627081 46627088 7.0E-06 CCAATTAA 8 JDP2_bZIP_full_dimeric_9_1 SELEX + 46631550 46631558 1.0E-05 ATGAGTCAC 9 TFAP4_bHLH_full_dimeric_10_1 SELEX + 46627139 46627148 1.0E-06 AACAGCTGTT 10 TFAP4_bHLH_full_dimeric_10_1 SELEX - 46627139 46627148 1.0E-06 AACAGCTGTT 10 FOXI1_forkhead_full_dimeric_17_1 SELEX - 46627127 46627143 6.0E-06 CTGTTTATGGTAAGGAA 17 HLF_MA0043.1 JASPAR + 46627117 46627128 1.0E-06 TATTACATAATT 12 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 46627081 46627090 8.0E-06 CCAATTAAAA 10 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX - 46627113 46627122 3.0E-06 GTAATAAAAA 10 Sox11_HMG_DBD_dimeric_15_1 SELEX + 46631617 46631631 6.0E-06 AACACTTCCACTGTC 15 HMX2_homeodomain_DBD_monomeric_11_1 SELEX + 46627080 46627090 5.0E-06 CCCAATTAAAA 11 CPEB1_RRM_full_monomeric_8_1 SELEX - 46627113 46627120 4.0E-06 AATAAAAA 8 IRF3_IRF_full_trimeric_21_1 SELEX + 46627005 46627025 8.0E-06 GGGACTTGGAAATCGAATCTG 21 Sox3_HMG_DBD_dimeric_17_1 SELEX - 46631616 46631632 6.0E-06 AGACAGTGGAAGTGTTA 17 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 46627081 46627098 1.0E-06 CCAATTAAAAGTGAATTT 18 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 46627113 46627123 2.0E-06 TGTAATAAAAA 11 MSC_bHLH_full_dimeric_10_1 SELEX + 46627139 46627148 1.0E-06 AACAGCTGTT 10 MSC_bHLH_full_dimeric_10_1 SELEX - 46627139 46627148 1.0E-06 AACAGCTGTT 10 CDX2_homeodomain_DBD_monomeric_9_1 SELEX - 46627114 46627122 1.0E-06 GTAATAAAA 9 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 46626816 46626828 3.0E-06 GGCAACAAAAACA 13 CDX1_homeodomain_DBD_monomeric_9_1 SELEX - 46627114 46627122 1.0E-06 GTAATAAAA 9 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX - 46627113 46627123 0.0E+00 TGTAATAAAAA 11 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX + 46627081 46627090 8.0E-06 CCAATTAAAA 10 V_HOXA9_01_M01351 TRANSFAC - 46627109 46627125 5.0E-06 TATGTAATAAAAAGAGA 17 V_FOXP1_01_M00987 TRANSFAC - 46626810 46626829 5.0E-06 GTGTTTTTGTTGCCTTTTCT 20 V_FOXP1_01_M00987 TRANSFAC + 46627097 46627116 8.0E-06 TTAAGTGAGTTTTCTCTTTT 20 V_AP1_Q2_M00173 TRANSFAC - 46631549 46631559 4.0E-06 AGTGACTCATT 11 V_DBX1_01_M01483 TRANSFAC - 46627113 46627129 2.0E-06 GAATTATGTAATAAAAA 17 V_FLI1_Q6_M01208 TRANSFAC + 46626865 46626875 4.0E-06 CCGGAAGTCAG 11 V_ZFP410_04_M02936 TRANSFAC + 46627263 46627279 7.0E-06 ACACCCCTCCCCTTTCT 17 TAL1_TCF3_MA0091.1 JASPAR + 46627137 46627148 5.0E-06 TAAACAGCTGTT 12 TAL1_TCF3_MA0091.1 JASPAR - 46627139 46627150 4.0E-06 ACAACAGCTGTT 12 V_DMRT3_01_M01148 TRANSFAC + 46627113 46627127 6.0E-06 TTTTTATTACATAAT 15 V_CEBP_Q3_M00770 TRANSFAC - 46627118 46627129 5.0E-06 GAATTATGTAAT 12 V_EVI1_04_M00081 TRANSFAC - 46631517 46631531 5.0E-06 TAACAGAATAAAATA 15 V_ISL2_01_M01328 TRANSFAC - 46627094 46627109 1.0E-06 AAAACTCACTTAAATT 16 V_IRF_Q6_01_M00972 TRANSFAC - 46627106 46627116 3.0E-06 AAAAGAGAAAA 11 V_IRF2_Q6_M01882 TRANSFAC + 46627085 46627100 3.0E-06 TTAAAAGTGAATTTAA 16 V_CEBP_Q2_M00190 TRANSFAC + 46627116 46627129 5.0E-06 TTATTACATAATTC 14 V_IRF3_05_M02767 TRANSFAC + 46627044 46627057 1.0E-06 AGGAAAGGAAACTG 14 V_HOXA2_01_M01402 TRANSFAC - 46627285 46627300 3.0E-06 ACGGTAATTAGGCGAT 16 V_AP4_Q6_02_M01860 TRANSFAC + 46627140 46627152 1.0E-05 ACAGCTGTTGTAA 13 V_TCFAP2E_04_M02926 TRANSFAC + 46631536 46631549 2.0E-06 AGCCAGAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 46631537 46631550 7.0E-06 GCCAGAAAAAAAAA 14 V_PAX7_01_M01339 TRANSFAC - 46627076 46627092 5.0E-06 ACTTTTAATTGGGAATT 17 V_CEBPB_01_M00109 TRANSFAC - 46627116 46627129 7.0E-06 GAATTATGTAATAA 14 V_LHX8_01_M01440 TRANSFAC + 46627286 46627302 6.0E-06 TCGCCTAATTACCGTGG 17 V_STAT4_Q4_M01666 TRANSFAC - 46631519 46631532 1.0E-06 TTAACAGAATAAAA 14 V_AP1_Q6_M00174 TRANSFAC - 46631549 46631559 2.0E-06 AGTGACTCATT 11 V_EVX2_01_M01386 TRANSFAC - 46627286 46627302 4.0E-06 CCACGGTAATTAGGCGA 17 V_ELF4_04_M02850 TRANSFAC + 46631537 46631553 6.0E-06 GCCAGAAAAAAAAATGA 17 V_GC_01_M00255 TRANSFAC - 46627263 46627276 9.0E-06 AAGGGGAGGGGTGT 14 V_CRX_Q4_M00623 TRANSFAC - 46626918 46626930 8.0E-06 CGACTAATCTGAC 13 V_HOXA6_01_M01392 TRANSFAC - 46627285 46627300 8.0E-06 ACGGTAATTAGGCGAT 16 V_DBP_Q6_01_M01872 TRANSFAC - 46627119 46627126 5.0E-06 TTATGTAA 8 V_ZFP105_03_M02827 TRANSFAC + 46631540 46631554 7.0E-06 AGAAAAAAAAATGAG 15 V_HOXB13_01_M01467 TRANSFAC + 46627078 46627093 8.0E-06 TTCCCAATTAAAAGTG 16 V_HOXB13_01_M01467 TRANSFAC - 46627110 46627125 1.0E-05 TATGTAATAAAAAGAG 16 V_E4BP4_01_M00045 TRANSFAC - 46627117 46627128 0.0E+00 AATTATGTAATA 12 V_XFD3_01_M00269 TRANSFAC - 46627168 46627181 4.0E-06 ACTGTCAACAAATG 14 V_RFX1_01_M00280 TRANSFAC + 46631552 46631568 2.0E-06 GAGTCACTAAGAAACAA 17 V_CEBPB_02_M00117 TRANSFAC + 46627116 46627129 1.0E-06 TTATTACATAATTC 14 V_AP1_Q4_M00188 TRANSFAC - 46631549 46631559 3.0E-06 AGTGACTCATT 11 V_HOXA1_01_M01487 TRANSFAC + 46627285 46627300 6.0E-06 ATCGCCTAATTACCGT 16 V_CDX2_01_M01449 TRANSFAC - 46627111 46627126 4.0E-06 TTATGTAATAAAAAGA 16 V_E47_02_M00071 TRANSFAC + 46627136 46627151 7.0E-06 ATAAACAGCTGTTGTA 16 V_IRF_Q6_M00772 TRANSFAC - 46627045 46627059 4.0E-06 CCCAGTTTCCTTTCC 15 V_CDX2_Q5_M00729 TRANSFAC + 46627110 46627123 5.0E-06 CTCTTTTTATTACA 14 V_GSH2_01_M01326 TRANSFAC - 46627285 46627300 1.0E-06 ACGGTAATTAGGCGAT 16 V_ISRE_01_M00258 TRANSFAC - 46627043 46627057 2.0E-06 CAGTTTCCTTTCCTA 15 V_JUNDM2_04_M02876 TRANSFAC + 46631546 46631561 2.0E-06 AAAAATGAGTCACTAA 16 V_JUNDM2_04_M02876 TRANSFAC - 46631547 46631562 4.0E-06 CTTAGTGACTCATTTT 16 V_CDX1_01_M01373 TRANSFAC - 46627111 46627126 1.0E-06 TTATGTAATAAAAAGA 16 V_PAX6_Q2_M00979 TRANSFAC + 46627227 46627240 2.0E-06 CTGAGCTGGAATGA 14 V_AP4_Q5_M00175 TRANSFAC + 46627139 46627148 9.0E-06 AACAGCTGTT 10 V_AP4_Q5_M00175 TRANSFAC - 46627139 46627148 9.0E-06 AACAGCTGTT 10 V_NCX_02_M01420 TRANSFAC - 46627113 46627129 4.0E-06 GAATTATGTAATAAAAA 17 V_SP3_Q3_M00665 TRANSFAC - 46631589 46631602 2.0E-06 ATTCTTGGGAAGGG 14 V_BLIMP1_Q6_M01066 TRANSFAC + 46627085 46627100 3.0E-06 TTAAAAGTGAATTTAA 16 V_ISGF4G_04_M02875 TRANSFAC + 46626821 46626834 3.0E-06 CAAAAACACTACCA 14 V_AP1_Q2_01_M00924 TRANSFAC - 46631546 46631557 2.0E-06 TGACTCATTTTT 12 V_IRF7_01_M00453 TRANSFAC + 46627010 46627027 0.0E+00 TTGGAAATCGAATCTGTG 18 V_VBP_01_M00228 TRANSFAC + 46627118 46627127 1.0E-06 ATTACATAAT 10 V_VBP_01_M00228 TRANSFAC - 46627118 46627127 8.0E-06 ATTATGTAAT 10 V_MYOD_01_M00001 TRANSFAC + 46627138 46627149 7.0E-06 AAACAGCTGTTG 12 V_MTF1_06_M02882 TRANSFAC - 46627115 46627128 7.0E-06 AATTATGTAATAAA 14 V_CEBPA_01_M00116 TRANSFAC + 46627116 46627129 7.0E-06 TTATTACATAATTC 14 V_AP1FJ_Q2_M00172 TRANSFAC - 46631549 46631559 3.0E-06 AGTGACTCATT 11 V_NCX_01_M00484 TRANSFAC - 46627290 46627299 8.0E-06 CGGTAATTAG 10 V_ZBTB4_04_M02929 TRANSFAC - 46626430 46626445 6.0E-06 GAGTCACTGGGATTTT 16 V_TCF7_04_M02921 TRANSFAC + 46627114 46627128 7.0E-06 TTTTATTACATAATT 15 V_CEBPB_Q6_M01896 TRANSFAC - 46627117 46627126 9.0E-06 TTATGTAATA 10 V_R_01_M00273 TRANSFAC - 46626941 46626961 1.0E-06 GTGTCCACGAAGGGTGGTGTC 21 V_IRF1_Q6_01_M01881 TRANSFAC + 46627104 46627117 2.0E-06 AGTTTTCTCTTTTT 14 V_IRC900814_03_M02766 TRANSFAC - 46627246 46627261 8.0E-06 AAAAACGACAAACATA 16 V_MYF6_03_M02781 TRANSFAC - 46627137 46627152 8.0E-06 TTACAACAGCTGTTTA 16 V_SRF_06_M02916 TRANSFAC + 46631537 46631553 4.0E-06 GCCAGAAAAAAAAATGA 17 V_FOXJ2_01_M00422 TRANSFAC - 46627208 46627225 7.0E-06 TGCTCAATAAACACTGTT 18 V_SOX18_04_M02905 TRANSFAC + 46627088 46627103 4.0E-06 AAAGTGAATTTAAGTG 16 V_HLF_01_M00260 TRANSFAC + 46627118 46627127 1.0E-06 ATTACATAAT 10 V_HLF_01_M00260 TRANSFAC - 46627118 46627127 5.0E-06 ATTATGTAAT 10 V_FOXO1_01_M00473 TRANSFAC - 46627211 46627220 9.0E-06 AATAAACACT 10 V_MOX1_01_M01443 TRANSFAC - 46627285 46627300 8.0E-06 ACGGTAATTAGGCGAT 16 V_LHX4_01_M01421 TRANSFAC + 46627286 46627302 1.0E-05 TCGCCTAATTACCGTGG 17 V_CEBP_Q2_01_M00912 TRANSFAC + 46627118 46627129 1.0E-06 ATTACATAATTC 12 V_HOXA10_01_M01464 TRANSFAC - 46627110 46627125 0.0E+00 TATGTAATAAAAAGAG 16 V_HOXD10_01_M01375 TRANSFAC - 46627109 46627125 2.0E-06 TATGTAATAAAAAGAGA 17 V_SOX5_04_M02910 TRANSFAC - 46626800 46626814 9.0E-06 TTTCTTAATCTACAA 15 V_CEBPE_01_M01772 TRANSFAC + 46627118 46627127 7.0E-06 ATTACATAAT 10 V_CEBPE_01_M01772 TRANSFAC - 46627118 46627127 2.0E-06 ATTATGTAAT 10 V_TCF3_05_M02920 TRANSFAC + 46631536 46631550 1.0E-06 AGCCAGAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 46631537 46631551 3.0E-06 GCCAGAAAAAAAAAT 15 V_PAX4_04_M00380 TRANSFAC + 46631545 46631574 5.0E-06 AAAAAATGAGTCACTAAGAAACAAGCTACT 30 V_HOXB5_01_M01319 TRANSFAC - 46627285 46627300 2.0E-06 ACGGTAATTAGGCGAT 16 V_HOX13_02_M01452 TRANSFAC - 46627285 46627300 5.0E-06 ACGGTAATTAGGCGAT 16 V_CEBPA_Q6_M01866 TRANSFAC - 46627117 46627129 7.0E-06 GAATTATGTAATA 13 V_IPF1_06_M01438 TRANSFAC - 46627285 46627300 4.0E-06 ACGGTAATTAGGCGAT 16

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