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SNRNP200 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 23020 small nuclear ribonucleoprotein 200kDa (U5) chr2 - 96970807 - 96976307 96971307 Transcription Factor Binding Sites   Download all TFBS in the SNRNP200 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints E2F3_E2F_DBD_dimeric_18_2 SELEX + 96972029 96972046 8.0E-06 TAGAATGGCGCCTTATGG 18 GABPA_MA0062.2 JASPAR - 96971311 96971321 7.0E-06 CCGGAAGCGGA 11 SPIC_ETS_full_monomeric_14_1 SELEX - 96971599 96971612 6.0E-06 CCAAAGAGGAAGGA 14 ZNF713_C2H2_full_monomeric_17_1 SELEX - 96971028 96971044 1.0E-06 TACAGGAGAGCCACGAA 17 EBF1_EBF_full_dimeric_14_1 SELEX + 96972470 96972483 3.0E-06 CTTCCCAAGGGACA 14 E2F2_E2F_DBD_dimeric_16_1 SELEX + 96972030 96972045 7.0E-06 AGAATGGCGCCTTATG 16 ETV2_ETS_DBD_monomeric_11_1 SELEX - 96971657 96971667 1.0E-05 AAACGGAAATG 11 RUNX2_RUNX_DBD_dimeric_16_1 SELEX + 96971215 96971230 8.0E-06 CTACCGCAAGCTGCAA 16 NFATC1_NFAT_full_dimeric_20_1 SELEX - 96971647 96971666 9.0E-06 AACGGAAATGGGGTTTTCGG 20 ELK1_MA0028.1 JASPAR - 96971591 96971600 5.0E-06 GAACCGGAAG 10 E2F1_E2F_DBD_monomeric_14_2 SELEX - 96972031 96972044 5.0E-06 ATAAGGCGCCATTC 14 IRF3_IRF_full_trimeric_21_1 SELEX - 96971006 96971026 7.0E-06 ACGAAGGGGAAATGGAATCGG 21 ETV6_ETS_full_dimeric_15_1 SELEX - 96971307 96971321 0.0E+00 CCGGAAGCGGAAGGG 15 ETV6_ETS_full_dimeric_15_1 SELEX - 96971589 96971603 3.0E-06 AAGGAACCGGAAGGA 15 E2F1_E2F_DBD_dimeric_12_1 SELEX + 96972032 96972043 6.0E-06 AATGGCGCCTTA 12 IRF2_MA0051.1 JASPAR - 96971014 96971031 7.0E-06 CGAAAACGAAGGGGAAAT 18 V_FOXP1_01_M00987 TRANSFAC + 96971709 96971728 0.0E+00 GTGTCTGTGTTTGTGTGTTT 20 V_ELK1_04_M01165 TRANSFAC - 96971589 96971599 1.0E-05 AACCGGAAGGA 11 V_EBF_Q6_M00977 TRANSFAC - 96972472 96972482 1.0E-06 GTCCCTTGGGA 11 V_AREB6_03_M00414 TRANSFAC + 96970850 96970861 5.0E-06 CCACACCTGTGA 12 V_ZFP410_04_M02936 TRANSFAC - 96971335 96971351 8.0E-06 ACGCCCCGCCCCGCACT 17 V_NF1_Q6_01_M00806 TRANSFAC - 96971607 96971623 9.0E-06 TGGGACTGTTGCCAAAG 17 V_NF1A_Q6_M02103 TRANSFAC - 96971608 96971623 1.0E-06 TGGGACTGTTGCCAAA 16 V_GATA3_03_M00351 TRANSFAC + 96970940 96970949 4.0E-06 AGAGATCTTA 10 V_GABP_B_M00341 TRANSFAC - 96971311 96971322 8.0E-06 CCCGGAAGCGGA 12 V_SP1_Q6_01_M00931 TRANSFAC + 96971340 96971349 4.0E-06 GGGGCGGGGC 10 V_SOX11_04_M02899 TRANSFAC - 96970811 96970824 4.0E-06 AGAATTGTTTAGCT 14 V_LDSPOLYA_B_M00317 TRANSFAC + 96971718 96971733 1.0E-06 TTTGTGTGTTTTAATG 16 V_TAL1_GATA1_01_M02243 TRANSFAC + 96967842 96967859 3.0E-06 ATGGATTCTAGAGATAAA 18 V_E2F1_01_M01250 TRANSFAC - 96971295 96971302 1.0E-05 CGTTTCTT 8 V_SP1_Q6_M00196 TRANSFAC + 96971338 96971350 7.0E-06 GCGGGGCGGGGCG 13 V_GADP_01_M01258 TRANSFAC + 96971313 96971324 8.0E-06 CGCTTCCGGGTC 12 Tal1_Gata1_MA0140.1 JASPAR + 96967842 96967859 3.0E-06 ATGGATTCTAGAGATAAA 18 V_RFX_Q6_M00975 TRANSFAC - 96971610 96971618 4.0E-06 CTGTTGCCA 9 V_SP4_Q5_M01273 TRANSFAC - 96971339 96971349 2.0E-06 GCCCCGCCCCG 11 V_GABPBETA_Q3_M01876 TRANSFAC - 96971306 96971316 7.0E-06 AGCGGAAGGGA 11 V_MYF6_04_M02885 TRANSFAC + 96971117 96971131 9.0E-06 AAGACCAAACGCACC 15 V_HOXB8_01_M01451 TRANSFAC - 96972454 96972469 1.0E-05 ACGAGTTATTAAAAAA 16 V_E2F6_01_M01252 TRANSFAC - 96971295 96971302 1.0E-05 CGTTTCTT 8 V_FOX_Q2_M00809 TRANSFAC + 96971717 96971729 3.0E-06 GTTTGTGTGTTTT 13 V_PPARG_02_M00515 TRANSFAC + 96972041 96972063 6.0E-06 TTATGGCTGAAGGTGACCTCCCT 23 V_FOXO4_01_M00472 TRANSFAC + 96970813 96970823 8.0E-06 CTAAACAATTC 11 V_SOX5_07_M02909 TRANSFAC - 96970811 96970827 2.0E-06 ACAAGAATTGTTTAGCT 17 V_P300_01_M00033 TRANSFAC + 96970861 96970874 4.0E-06 AAAAGTAGTGAGTG 14 V_ELK1_03_M01163 TRANSFAC - 96971589 96971599 1.0E-05 AACCGGAAGGA 11 V_ARID5A_04_M02840 TRANSFAC - 96971136 96971152 8.0E-06 TCTGCAATACGAGTACA 17 V_NF1_Q6_M00193 TRANSFAC + 96971607 96971624 4.0E-06 CTTTGGCAACAGTCCCAT 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.