Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

FAN1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 22909 FANCD2/FANCI-associated nuclease 1 chr15 + 31191054 - 31196575 31196075 Transcription Factor Binding Sites   Download all TFBS in the FAN1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Egr1_MA0162.1 JASPAR + 31195861 31195871 9.0E-06 TGCGGGGGCGT 11 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 31195901 31195912 1.0E-05 TCCTTTCCCACC 12 HINFP1_C2H2_full_monomeric_12_1 SELEX + 31196247 31196258 1.0E-05 CAGCGTCCGCCG 12 EGR1_C2H2_full_monomeric_14_1 SELEX - 31195859 31195872 2.0E-06 CACGCCCCCGCACG 14 Egr3_C2H2_DBD_monomeric_15_1 SELEX - 31195858 31195872 4.0E-06 CACGCCCCCGCACGC 15 EGR4_C2H2_DBD_monomeric_16_2 SELEX - 31195858 31195873 7.0E-06 GCACGCCCCCGCACGC 16 Stat3_MA0144.1 JASPAR + 31196062 31196071 1.0E-05 TGCCTGGAAG 10 TFAP2A_MA0003.1 JASPAR + 31196167 31196175 8.0E-06 GCCCTAGGG 9 IRF3_IRF_full_trimeric_21_1 SELEX + 31198603 31198623 8.0E-06 GTGTGGAGGAAATGGAAACTT 21 NHLH1_bHLH_full_dimeric_10_1 SELEX + 31196316 31196325 9.0E-06 CGCAGCTGCC 10 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 31195784 31195797 1.0E-05 CTAAACGTGTTTGT 14 V_AP2ALPHA_01_M00469 TRANSFAC + 31196167 31196175 8.0E-06 GCCCTAGGG 9 V_ZFP187_03_M02830 TRANSFAC - 31198632 31198645 0.0E+00 TAATGTACCAATTT 14 V_ALX4_01_M00619 TRANSFAC - 31195675 31195687 7.0E-06 CCTGCGAATAAGC 13 V_IRF3_05_M02767 TRANSFAC + 31198610 31198623 2.0E-06 GGAAATGGAAACTT 14 V_EGR1_02_M01972 TRANSFAC + 31195861 31195871 8.0E-06 TGCGGGGGCGT 11 V_MEF2A_Q6_M02024 TRANSFAC - 31198642 31198651 4.0E-06 TATTTTTAAT 10 V_HELIOSA_02_M01004 TRANSFAC + 31195629 31195639 5.0E-06 TTTTGGAAAAC 11 V_HNF3G_Q4_M02015 TRANSFAC - 31195783 31195790 7.0E-06 TGTTTGTT 8 V_ISRE_01_M00258 TRANSFAC - 31198609 31198623 3.0E-06 AAGTTTCCATTTCCT 15 V_MEF2_04_M00233 TRANSFAC - 31196456 31196477 9.0E-06 TCCGTTTCTAAAAAGGGACAAT 22 V_RREB1_01_M00257 TRANSFAC + 31195779 31195792 9.0E-06 CCCCAACAAACACG 14 V_HIC1_02_M01072 TRANSFAC + 31195913 31195927 9.0E-06 AGGAGGTGCCCGGGT 15 V_HIC1_02_M01072 TRANSFAC + 31196316 31196330 6.0E-06 CGCAGCTGCCCGCGG 15 V_IK3_01_M00088 TRANSFAC + 31196053 31196065 7.0E-06 GGCTGGGAATGCC 13 V_IRF7_01_M00453 TRANSFAC + 31198608 31198625 0.0E+00 GAGGAAATGGAAACTTTC 18 V_ZFP691_04_M02937 TRANSFAC - 31195822 31195838 5.0E-06 TCTGAGACTCCTCTCCG 17 V_EGR1_06_M02744 TRANSFAC - 31195859 31195872 5.0E-06 CACGCCCCCGCACG 14 V_DMRT2_01_M01147 TRANSFAC + 31198611 31198626 6.0E-06 GAAATGGAAACTTTCA 16 V_CTF1_01_M01196 TRANSFAC + 31198686 31198699 4.0E-06 TGGCTCCAAGCCAG 14 V_HOXD10_01_M01375 TRANSFAC + 31198637 31198653 6.0E-06 GGTACATTAAAAATACT 17 TLX1_NFIC_MA0119.1 JASPAR + 31198686 31198699 4.0E-06 TGGCTCCAAGCCAG 14 V_ATATA_B_M00311 TRANSFAC - 31195693 31195702 7.0E-06 CTACTTAAGC 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.