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R3HDM2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 22864 R3H domain containing 2 chr12 - 57703746 - 57709246 57704246 Transcription Factor Binding Sites   Download all TFBS in the R3HDM2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX - 57703458 57703473 0.0E+00 ACGCATATTTAATAAG 16 NFE2_bZIP_DBD_dimeric_11_1 SELEX + 57703441 57703451 8.0E-06 TATGAGTCATT 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 57703441 57703451 4.0E-06 AATGACTCATA 11 CTCF_MA0139.1 JASPAR + 57701712 57701730 2.0E-06 GCTCCAGTAGATGGCAGCA 19 HOXD12_homeodomain_DBD_monomeric_9_1 SELEX - 57703450 57703458 9.0E-06 GTCATAAAA 9 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX - 57703449 57703458 6.0E-06 GTCATAAAAT 10 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX - 57703449 57703458 9.0E-06 GTCATAAAAT 10 HOXA10_homeodomain_DBD_monomeric_12_1 SELEX - 57703448 57703459 1.0E-06 AGTCATAAAATG 12 Mafb_bZIP_DBD_monomeric_12_1 SELEX + 57703356 57703367 0.0E+00 AAAATGCTGACT 12 HOXD11_homeodomain_DBD_monomeric_10_1 SELEX - 57703449 57703458 3.0E-06 GTCATAAAAT 10 HOXC11_homeodomain_full_monomeric_11_1 SELEX - 57703449 57703459 3.0E-06 AGTCATAAAAT 11 BARHL2_homeodomain_full_dimeric_16_1 SELEX - 57703304 57703319 5.0E-06 TAAATGTGAGTAAAAG 16 POU4F3_POU_DBD_monomeric_16_1 SELEX - 57703458 57703473 1.0E-06 ACGCATATTTAATAAG 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX - 57703304 57703319 5.0E-06 TAAATGTGAGTAAAAG 16 Hoxc10_homeodomain_DBD_monomeric_10_1 SELEX - 57703449 57703458 1.0E-06 GTCATAAAAT 10 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 57703450 57703459 2.0E-06 AGTCATAAAA 10 POU6F2_POU_DBD_dimeric_16_1 SELEX + 57703426 57703441 4.0E-06 TTTAAGAGTTTATTAT 16 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX - 57703450 57703458 9.0E-06 GTCATAAAA 9 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX - 57703447 57703460 4.0E-06 AAGTCATAAAATGA 14 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX - 57703455 57703468 9.0E-06 TATTTAATAAGTCA 14 HOXC11_homeodomain_full_monomeric_11_2 SELEX - 57703449 57703459 2.0E-06 AGTCATAAAAT 11 Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 57706276 57706285 6.0E-06 AGCAGCTGCC 10 FOXI1_MA0042.1 JASPAR + 57701808 57701819 5.0E-06 TTGTATTTGTAT 12 HOXC11_homeodomain_DBD_monomeric_11_1 SELEX - 57703449 57703459 1.0E-06 AGTCATAAAAT 11 NRL_bZIP_DBD_monomeric_11_1 SELEX + 57703356 57703366 1.0E-06 AAAATGCTGAC 11 POU1F1_POU_DBD_monomeric_17_1 SELEX + 57703451 57703467 5.0E-06 TTTATGACTTATTAAAT 17 POU1F1_POU_DBD_monomeric_17_1 SELEX - 57703460 57703476 3.0E-06 CAAACGCATATTTAATA 17 HESX1_homeodomain_DBD_dimeric_15_1 SELEX - 57703451 57703465 8.0E-06 TTAATAAGTCATAAA 15 LHX9_homeodomain_DBD_dimeric_13_1 SELEX + 57703452 57703464 7.0E-06 TTATGACTTATTA 13 Hoxa11_homeodomain_DBD_monomeric_12_1 SELEX - 57703448 57703459 6.0E-06 AGTCATAAAATG 12 JDP2_bZIP_full_dimeric_9_1 SELEX + 57703442 57703450 4.0E-06 ATGAGTCAT 9 JDP2_bZIP_full_dimeric_9_1 SELEX - 57703442 57703450 2.0E-06 ATGACTCAT 9 Myf_MA0055.1 JASPAR - 57706275 57706286 1.0E-06 AGGCAGCTGCTG 12 HOXC10_homeodomain_DBD_monomeric_10_3 SELEX - 57703449 57703458 0.0E+00 GTCATAAAAT 10 Hoxd9_homeodomain_DBD_monomeric_9_2 SELEX - 57703450 57703458 7.0E-06 GTCATAAAA 9 HOXD12_homeodomain_DBD_monomeric_11_1 SELEX - 57703449 57703459 4.0E-06 AGTCATAAAAT 11 MAFK_bZIP_full_monomeric_12_1 SELEX + 57703355 57703366 0.0E+00 AAAAATGCTGAC 12 RUNX1_MA0002.2 JASPAR + 57706231 57706241 8.0E-06 GGCTGTGGTTA 11 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 57703449 57703459 1.0E-06 AGTCATAAAAT 11 HOXC12_homeodomain_DBD_monomeric_11_1 SELEX - 57703449 57703459 4.0E-06 AGTCATAAAAT 11 CDX2_homeodomain_DBD_monomeric_9_1 SELEX - 57703450 57703458 6.0E-06 GTCATAAAA 9 NFE2L2_MA0150.1 JASPAR - 57706352 57706362 6.0E-06 ATGACTTTGCA 11 CDX1_homeodomain_DBD_monomeric_9_1 SELEX - 57703450 57703458 6.0E-06 GTCATAAAA 9 POU4F1_POU_DBD_monomeric_14_1 SELEX - 57703460 57703473 3.0E-06 ACGCATATTTAATA 14 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX - 57703449 57703459 2.0E-06 AGTCATAAAAT 11 V_HOXA9_01_M01351 TRANSFAC - 57703445 57703461 3.0E-06 TAAGTCATAAAATGACT 17 V_AP1_Q2_M00173 TRANSFAC - 57703441 57703451 6.0E-06 AATGACTCATA 11 V_FREAC7_01_M00293 TRANSFAC - 57701807 57701822 8.0E-06 GAAATACAAATACAAT 16 V_FOXP3_Q4_M00992 TRANSFAC + 57703446 57703462 6.0E-06 GTCATTTTATGACTTAT 17 V_AML_Q6_M00769 TRANSFAC + 57706229 57706243 0.0E+00 AAGGCTGTGGTTAGA 15 V_SOX14_05_M02902 TRANSFAC + 57706342 57706356 5.0E-06 TTCACACAATTGCAA 15 V_MAFK_03_M02776 TRANSFAC + 57703354 57703368 0.0E+00 GAAAAATGCTGACTG 15 V_FOXA2_04_M02749 TRANSFAC - 57703470 57703486 9.0E-06 AAACTGTACACAAACGC 17 V_EVI1_04_M00081 TRANSFAC + 57701678 57701692 7.0E-06 TGACAAGACTGAATA 15 V_BCL6_01_M01183 TRANSFAC + 57701819 57701834 9.0E-06 TTTCCAGGTGAATTTT 16 V_MAFB_05_M02775 TRANSFAC + 57703355 57703371 3.0E-06 AAAAATGCTGACTGCTT 17 V_MMEF2_Q6_M00405 TRANSFAC + 57703458 57703473 8.0E-06 CTTATTAAATATGCGT 16 V_STAT6_01_M00494 TRANSFAC + 57701817 57701824 7.0E-06 TATTTCCA 8 V_HFH4_01_M00742 TRANSFAC + 57701808 57701820 8.0E-06 TTGTATTTGTATT 13 V_HOXA13_03_M01430 TRANSFAC - 57703447 57703462 8.0E-06 ATAAGTCATAAAATGA 16 V_CDX_Q5_M00991 TRANSFAC - 57703439 57703456 7.0E-06 CATAAAATGACTCATATA 18 V_HOXC13_01_M01317 TRANSFAC - 57703447 57703462 2.0E-06 ATAAGTCATAAAATGA 16 V_NKX62_Q2_M00489 TRANSFAC + 57703459 57703470 8.0E-06 TTATTAAATATG 12 V_HNF1_C_M00206 TRANSFAC + 57703445 57703461 6.0E-06 AGTCATTTTATGACTTA 17 V_AP1_Q6_M00174 TRANSFAC - 57703441 57703451 5.0E-06 AATGACTCATA 11 V_ELF4_04_M02850 TRANSFAC - 57703431 57703447 6.0E-06 ACTCATATAATAAACTC 17 V_BACH1_01_M00495 TRANSFAC + 57703439 57703453 3.0E-06 TATATGAGTCATTTT 15 V_MYF_01_M01302 TRANSFAC - 57706275 57706286 1.0E-06 AGGCAGCTGCTG 12 V_RUNX1_01_M02257 TRANSFAC + 57706231 57706241 8.0E-06 GGCTGTGGTTA 11 V_SOX7_04_M02911 TRANSFAC + 57703431 57703452 5.0E-06 GAGTTTATTATATGAGTCATTT 22 V_HOXD12_01_M01380 TRANSFAC - 57703446 57703462 3.0E-06 ATAAGTCATAAAATGAC 17 V_AP1_Q6_01_M00925 TRANSFAC - 57703442 57703450 4.0E-06 ATGACTCAT 9 V_HOXB9_01_M01426 TRANSFAC - 57703446 57703461 6.0E-06 TAAGTCATAAAATGAC 16 V_CDX2_01_M01449 TRANSFAC - 57703447 57703462 1.0E-06 ATAAGTCATAAAATGA 16 V_HNF3_Q6_M00791 TRANSFAC - 57701809 57701821 5.0E-06 AAATACAAATACA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 57701811 57701821 3.0E-06 TATTTGTATTT 11 V_HOXC11_01_M01329 TRANSFAC - 57703447 57703462 0.0E+00 ATAAGTCATAAAATGA 16 V_HNF1_Q6_01_M01011 TRANSFAC - 57701822 57701842 6.0E-06 AAAAAAAAAAAATTCACCTGG 21 V_HOXD11_01_M01434 TRANSFAC - 57703446 57703462 2.0E-06 ATAAGTCATAAAATGAC 17 V_JUNDM2_04_M02876 TRANSFAC + 57703438 57703453 9.0E-06 TTATATGAGTCATTTT 16 V_JUNDM2_04_M02876 TRANSFAC - 57703439 57703454 4.0E-06 TAAAATGACTCATATA 16 V_CDX1_01_M01373 TRANSFAC - 57703447 57703462 0.0E+00 ATAAGTCATAAAATGA 16 V_OCT1_04_M00138 TRANSFAC - 57703459 57703481 2.0E-06 GTACACAAACGCATATTTAATAA 23 V_HOXC12_01_M01437 TRANSFAC - 57703446 57703462 1.0E-06 ATAAGTCATAAAATGAC 17 V_AP1_C_M00199 TRANSFAC + 57703442 57703450 8.0E-06 ATGAGTCAT 9 V_CDC5_01_M00478 TRANSFAC + 57703368 57703379 7.0E-06 GCTTTAACACAA 12 V_HB24_01_M01399 TRANSFAC - 57703457 57703471 8.0E-06 GCATATTTAATAAGT 15 V_HOXA11_01_M01378 TRANSFAC - 57703447 57703462 0.0E+00 ATAAGTCATAAAATGA 16 V_CTCF_02_M01259 TRANSFAC + 57701709 57701728 2.0E-06 AGAGCTCCAGTAGATGGCAG 20 V_CTCF_01_M01200 TRANSFAC + 57701711 57701730 3.0E-06 AGCTCCAGTAGATGGCAGCA 20 V_HOXD9_Q2_M01834 TRANSFAC - 57703450 57703459 4.0E-06 AGTCATAAAA 10 V_ZFP691_04_M02937 TRANSFAC - 57701755 57701771 1.0E-06 GACTTGACTCCTTTTGC 17 V_AP1_Q4_01_M00926 TRANSFAC + 57703443 57703450 1.0E-05 TGAGTCAT 8 V_CAAT_C_M00200 TRANSFAC - 57703472 57703496 1.0E-06 ACCAAAAAATAAACTGTACACAAAC 25 V_GATA6_01_M00462 TRANSFAC - 57706315 57706324 6.0E-06 AAAGATAATT 10 V_FRA1_Q5_M01267 TRANSFAC + 57703443 57703450 1.0E-05 TGAGTCAT 8 V_FOX_Q2_M00809 TRANSFAC + 57706292 57706304 9.0E-06 CTTGGTTTACTTA 13 V_HFH3_01_M00289 TRANSFAC + 57701808 57701820 4.0E-06 TTGTATTTGTATT 13 V_SOX18_04_M02905 TRANSFAC - 57703384 57703399 0.0E+00 GTGTTAAATTCATATC 16 V_HOXC10_01_M01361 TRANSFAC - 57703447 57703462 0.0E+00 ATAAGTCATAAAATGA 16 V_MEF2_01_M00006 TRANSFAC - 57706313 57706328 7.0E-06 CTCTAAAGATAATTTA 16 V_FREAC4_01_M00292 TRANSFAC - 57706291 57706306 6.0E-06 CCTAAGTAAACCAAGT 16 V_NFE2L2_01_M02263 TRANSFAC - 57706352 57706362 6.0E-06 ATGACTTTGCA 11 V_HMEF2_Q6_M00406 TRANSFAC - 57706313 57706328 9.0E-06 CTCTAAAGATAATTTA 16 V_HOXA10_01_M01464 TRANSFAC - 57703446 57703461 3.0E-06 TAAGTCATAAAATGAC 16 V_CMAF_01_M01070 TRANSFAC + 57703355 57703373 2.0E-06 AAAAATGCTGACTGCTTTA 19 V_HOXD10_01_M01375 TRANSFAC - 57703428 57703444 9.0E-06 CATATAATAAACTCTTA 17 V_TCF11MAFG_01_M00284 TRANSFAC + 57703449 57703470 0.0E+00 ATTTTATGACTTATTAAATATG 22 V_TCF11MAFG_01_M00284 TRANSFAC - 57706346 57706367 0.0E+00 ACTATATGACTTTGCAATTGTG 22 V_PAX2_02_M00486 TRANSFAC - 57703431 57703439 2.0E-06 AATAAACTC 9 V_HOXC9_01_M01416 TRANSFAC - 57703447 57703462 2.0E-06 ATAAGTCATAAAATGA 16 V_TCF11_01_M00285 TRANSFAC + 57703446 57703458 2.0E-06 GTCATTTTATGAC 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.