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CLCA4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 22802 chloride channel accessory 4 chr1 + 87007758 - 87013258 87012758 Transcription Factor Binding Sites   Download all TFBS in the CLCA4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 87012517 87012534 9.0E-06 AATATCAACAATGACAAC 18 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 87008396 87008408 3.0E-06 CTAAACAAATACA 13 Tp53_p53l_DBD_dimeric_18_1 SELEX - 87012652 87012669 8.0E-06 ACATGAGAAAATACATGA 18 SPIC_ETS_full_monomeric_14_1 SELEX + 87012733 87012746 5.0E-06 ATAAAGAGAAAGAA 14 EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 87012628 87012641 9.0E-06 TAATTAAGCAATCA 14 Dlx1_homeodomain_DBD_monomeric_8_1 SELEX + 87012627 87012634 4.0E-06 ATAATTAA 8 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 87012517 87012528 3.0E-06 AATATCAACAAT 12 IRX2_homeodomain_DBD_dimeric_12_1 SELEX - 87008363 87008374 3.0E-06 CAACATAACAAG 12 IRX2_homeodomain_DBD_dimeric_12_1 SELEX + 87008404 87008415 6.0E-06 ATACATAACAAC 12 IRX2_homeodomain_DBD_dimeric_12_1 SELEX - 87012665 87012676 4.0E-06 GTACATTACATG 12 FOXL1_forkhead_full_dimeric_13_1 SELEX + 87008395 87008407 7.0E-06 ACTAAACAAATAC 13 HNF1B_MA0153.1 JASPAR - 87008388 87008399 1.0E-05 TTAGTGTGTAAT 12 TBP_MA0108.2 JASPAR + 87012729 87012743 8.0E-06 GTATATAAAGAGAAA 15 ZNF232_C2H2_full_monomeric_19_1 SELEX - 87008508 87008526 3.0E-06 GAGTCAAACCTAGATTCAA 19 NFIL3_MA0025.1 JASPAR + 87012616 87012626 0.0E+00 TTATGTAACAT 11 IRF1_MA0050.1 JASPAR - 87012818 87012829 4.0E-06 GAAAACAAAACC 12 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 87008396 87008406 7.0E-06 CTAAACAAATA 11 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX + 87012641 87012654 5.0E-06 AGGTGAATTAGTCA 14 FOXI1_MA0042.1 JASPAR - 87008398 87008409 3.0E-06 ATGTATTTGTTT 12 DLX6_homeodomain_DBD_monomeric_8_1 SELEX + 87012627 87012634 9.0E-06 ATAATTAA 8 VAX1_homeodomain_DBD_monomeric_8_1 SELEX - 87012627 87012634 9.0E-06 TTAATTAT 8 DLX3_homeodomain_DBD_monomeric_8_1 SELEX + 87012627 87012634 9.0E-06 ATAATTAA 8 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 87008396 87008406 4.0E-06 CTAAACAAATA 11 POU1F1_POU_DBD_monomeric_17_1 SELEX - 87012432 87012448 6.0E-06 TACATGAATAAGTTCTT 17 Foxd3_MA0041.1 JASPAR - 87012483 87012494 7.0E-06 GATTTTTTTTTT 12 Foxd3_MA0041.1 JASPAR - 87012765 87012776 1.0E-06 AAATGTTGGTTT 12 TEAD3_TEA_DBD_monomeric_8_1 SELEX - 87008570 87008577 1.0E-05 ACATTCCA 8 EN1_homeodomain_full_dimeric_14_1 SELEX + 87012628 87012641 8.0E-06 TAATTAAGCAATCA 14 EN1_homeodomain_full_dimeric_14_1 SELEX - 87012628 87012641 0.0E+00 TGATTGCTTAATTA 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 87012519 87012532 7.0E-06 TATCAACAATGACA 14 SPDEF_ETS_full_putative-multimer_16_1 SELEX - 87008374 87008389 7.0E-06 ATAGAAAAATGTATCC 16 HLF_MA0043.1 JASPAR - 87012614 87012625 7.0E-06 TGTTACATAAAA 12 ZNF410_C2H2_DBD_monomeric_17_1 SELEX + 87012689 87012705 0.0E+00 AACATCCCATAATCAGC 17 GBX2_homeodomain_DBD_dimeric_14_1 SELEX + 87012628 87012641 4.0E-06 TAATTAAGCAATCA 14 GBX2_homeodomain_DBD_dimeric_14_1 SELEX - 87012628 87012641 2.0E-06 TGATTGCTTAATTA 14 IRF3_IRF_full_trimeric_21_1 SELEX - 87012817 87012837 8.0E-06 ACTAAGAGGAAAACAAAACCT 21 POU3F3_POU_DBD_dimeric_12_1 SELEX + 87012627 87012638 2.0E-06 ATAATTAAGCAA 12 ELF5_MA0136.1 JASPAR + 87012862 87012870 4.0E-06 TACTTCCTT 9 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 87008396 87008408 4.0E-06 CTAAACAAATACA 13 Irx3_homeodomain_DBD_dimeric_12_1 SELEX - 87012438 87012449 2.0E-06 TTACATGAATAA 12 Irx3_homeodomain_DBD_dimeric_12_1 SELEX - 87012660 87012671 4.0E-06 TTACATGAGAAA 12 RORA_2_MA0072.1 JASPAR - 87008437 87008450 7.0E-06 TGTCACTGGGTCAA 14 DLX5_homeodomain_FL_monomeric_8_1 SELEX + 87012627 87012634 8.0E-06 ATAATTAA 8 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 87012529 87012542 6.0E-06 GACAACAATAAAGA 14 IRX5_homeodomain_DBD_dimeric_12_1 SELEX - 87008363 87008374 2.0E-06 CAACATAACAAG 12 IRX5_homeodomain_DBD_dimeric_12_1 SELEX + 87008404 87008415 4.0E-06 ATACATAACAAC 12 IRX5_homeodomain_DBD_dimeric_12_1 SELEX - 87012665 87012676 4.0E-06 GTACATTACATG 12 V_HNF3B_01_M00131 TRANSFAC - 87008397 87008411 3.0E-06 TTATGTATTTGTTTA 15 V_AP1_Q2_M00173 TRANSFAC - 87012604 87012614 1.0E-06 AGTGACTAAGA 11 V_MSX3_01_M01341 TRANSFAC + 87012622 87012637 9.0E-06 AACATATAATTAAGCA 16 V_TCF3_01_M01594 TRANSFAC - 87012742 87012754 9.0E-06 CTTTTCTTTTCTT 13 V_TCF3_01_M01594 TRANSFAC + 87012819 87012831 9.0E-06 GTTTTGTTTTCCT 13 V_OBOX5_05_M03066 TRANSFAC - 87012484 87012500 8.0E-06 AACAGGGATTTTTTTTT 17 V_DMRT3_01_M01148 TRANSFAC + 87008370 87008384 0.0E+00 TGTTGGATACATTTT 15 V_DMRT3_01_M01148 TRANSFAC - 87012615 87012629 8.0E-06 TATATGTTACATAAA 15 V_CEBP_Q3_M00770 TRANSFAC + 87012628 87012639 7.0E-06 TAATTAAGCAAT 12 V_SOX30_03_M02804 TRANSFAC + 87012519 87012534 9.0E-06 TATCAACAATGACAAC 16 V_HMGIY_Q3_M01010 TRANSFAC - 87012484 87012498 3.0E-06 CAGGGATTTTTTTTT 15 V_FOXD3_01_M00130 TRANSFAC - 87012483 87012494 8.0E-06 GATTTTTTTTTT 12 V_FOXD3_01_M00130 TRANSFAC - 87012765 87012776 2.0E-06 AAATGTTGGTTT 12 V_BCL6_01_M01183 TRANSFAC + 87008420 87008435 0.0E+00 TTTTTTGTAACTCTTT 16 V_FOXO4_02_M00476 TRANSFAC + 87012819 87012832 6.0E-06 GTTTTGTTTTCCTC 14 V_MAFB_03_M02879 TRANSFAC - 87008418 87008432 4.0E-06 GAGTTACAAAAAAAT 15 V_MAFB_03_M02879 TRANSFAC + 87012476 87012490 2.0E-06 CTATTGAAAAAAAAA 15 V_FOXJ1_04_M02854 TRANSFAC + 87012525 87012539 7.0E-06 CAATGACAACAATAA 15 V_IRF2_Q6_M01882 TRANSFAC + 87012732 87012747 5.0E-06 TATAAAGAGAAAGAAA 16 V_NFAT3_Q3_M01734 TRANSFAC - 87012557 87012566 3.0E-06 ACATTTTCCT 10 V_POU1F1_Q6_M00744 TRANSFAC - 87012436 87012445 4.0E-06 ATGAATAAGT 10 V_FOXO3A_Q1_M01137 TRANSFAC + 87008395 87008406 6.0E-06 ACTAAACAAATA 12 V_CEBP_Q2_M00190 TRANSFAC - 87012628 87012641 0.0E+00 TGATTGCTTAATTA 14 V_HOXC4_01_M01369 TRANSFAC + 87012623 87012639 7.0E-06 ACATATAATTAAGCAAT 17 V_HNF3_Q6_01_M01012 TRANSFAC - 87008394 87008411 1.0E-06 TTATGTATTTGTTTAGTG 18 V_HNF3_Q6_01_M01012 TRANSFAC - 87012523 87012540 8.0E-06 TTTATTGTTGTCATTGTT 18 V_FOXJ1_03_M02750 TRANSFAC + 87008393 87008408 1.0E-05 ACACTAAACAAATACA 16 V_HFH4_01_M00742 TRANSFAC - 87008397 87008409 0.0E+00 ATGTATTTGTTTA 13 V_NKX24_01_M01350 TRANSFAC + 87012751 87012766 6.0E-06 AAAGCCTCTTGAACAA 16 V_HTF_01_M00538 TRANSFAC - 87012535 87012558 5.0E-06 CTGTTGGAACACGTTTTCTTTATT 24 V_AIRE_02_M01000 TRANSFAC + 87012807 87012831 4.0E-06 GGTTATTCAGAGGTTTTGTTTTCCT 25 V_HOXD13_01_M01404 TRANSFAC - 87012571 87012586 4.0E-06 CATTTTATAAAATGCA 16 V_HOXD13_01_M01404 TRANSFAC + 87012573 87012588 3.0E-06 CATTTTATAAAATGAT 16 V_TCFAP2E_04_M02926 TRANSFAC + 87012476 87012489 1.0E-06 CTATTGAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 87012477 87012490 0.0E+00 TATTGAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 87012479 87012492 4.0E-06 TTGAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 87012480 87012493 7.0E-06 TGAAAAAAAAAAAT 14 V_TCFAP2E_04_M02926 TRANSFAC - 87012657 87012670 4.0E-06 TACATGAGAAAATA 14 V_PAX6_02_M01391 TRANSFAC - 87012622 87012637 3.0E-06 TGCTTAATTATATGTT 16 V_CDX_Q5_M00991 TRANSFAC + 87008395 87008412 7.0E-06 ACTAAACAAATACATAAC 18 V_PAX7_01_M01339 TRANSFAC + 87012623 87012639 9.0E-06 ACATATAATTAAGCAAT 17 V_VSX1_01_M01335 TRANSFAC + 87012623 87012639 9.0E-06 ACATATAATTAAGCAAT 17 V_NFY_C_M00209 TRANSFAC - 87012630 87012643 5.0E-06 CCTGATTGCTTAAT 14 V_ELF4_04_M02850 TRANSFAC - 87008414 87008430 1.0E-06 GTTACAAAAAAATCAGT 17 V_ELF4_04_M02850 TRANSFAC + 87012477 87012493 4.0E-06 TATTGAAAAAAAAAAAT 17 V_ELF4_04_M02850 TRANSFAC + 87012478 87012494 0.0E+00 ATTGAAAAAAAAAAATC 17 V_ELF4_04_M02850 TRANSFAC + 87012479 87012495 0.0E+00 TTGAAAAAAAAAAATCC 17 V_SOX13_03_M02797 TRANSFAC + 87012527 87012542 6.0E-06 ATGACAACAATAAAGA 16 V_OBOX5_02_M01480 TRANSFAC - 87012484 87012500 8.0E-06 AACAGGGATTTTTTTTT 17 V_POU3F2_01_M00463 TRANSFAC + 87008376 87008389 5.0E-06 ATACATTTTTCTAT 14 V_POU3F2_01_M00463 TRANSFAC + 87012570 87012583 9.0E-06 ATGCATTTTATAAA 14 V_DBP_Q6_01_M01872 TRANSFAC + 87012616 87012623 5.0E-06 TTATGTAA 8 V_ZFP105_03_M02827 TRANSFAC + 87012478 87012492 7.0E-06 ATTGAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 87012479 87012493 9.0E-06 TTGAAAAAAAAAAAT 15 V_FOXO1_02_M00474 TRANSFAC + 87012819 87012832 8.0E-06 GTTTTGTTTTCCTC 14 V_ZFP410_03_M02832 TRANSFAC - 87012686 87012702 0.0E+00 GATTATGGGATGTTGAC 17 V_GFI1_01_M00250 TRANSFAC - 87008405 87008428 9.0E-06 TACAAAAAAATCAGTTGTTATGTA 24 V_GFI1_01_M00250 TRANSFAC + 87012483 87012506 3.0E-06 AAAAAAAAAATCCCTGTTGTCAAG 24 V_GFI1_01_M00250 TRANSFAC - 87012579 87012602 0.0E+00 TCAGAATAAATCAGATCATTTTAT 24 V_SOX8_04_M02912 TRANSFAC + 87012438 87012451 3.0E-06 TTATTCATGTAACC 14 V_NFAT_Q6_M00302 TRANSFAC + 87012554 87012565 7.0E-06 AACAGGAAAATG 12 V_NFAT_Q6_M00302 TRANSFAC - 87012823 87012834 8.0E-06 AAGAGGAAAACA 12 V_TATA_01_M00252 TRANSFAC + 87012729 87012743 8.0E-06 GTATATAAAGAGAAA 15 V_CEBPD_Q6_M00621 TRANSFAC - 87012629 87012640 5.0E-06 GATTGCTTAATT 12 V_CEBPB_02_M00117 TRANSFAC - 87012628 87012641 1.0E-06 TGATTGCTTAATTA 14 V_IRX4_01_M01410 TRANSFAC - 87012617 87012633 7.0E-06 TAATTATATGTTACATA 17 V_IRX4_01_M01410 TRANSFAC + 87012618 87012634 8.0E-06 ATGTAACATATAATTAA 17 V_AP1_Q4_M00188 TRANSFAC - 87012604 87012614 1.0E-06 AGTGACTAAGA 11 V_HNF1B_04_M02266 TRANSFAC - 87008388 87008399 1.0E-05 TTAGTGTGTAAT 12 V_HNF3_Q6_M00791 TRANSFAC + 87008396 87008408 1.0E-06 CTAAACAAATACA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 87008396 87008406 1.0E-06 TATTTGTTTAG 11 V_PAX2_01_M00098 TRANSFAC + 87012647 87012665 4.0E-06 ATTAGTCATGTATTTTCTC 19 V_MEF2_03_M00232 TRANSFAC - 87012420 87012441 5.0E-06 ATAAGTTCTTTAATTATAATTT 22 V_SOX18_03_M02801 TRANSFAC - 87012526 87012541 1.0E-06 CTTTATTGTTGTCATT 16 V_OCT1_04_M00138 TRANSFAC + 87012470 87012492 3.0E-06 AAAAACCTATTGAAAAAAAAAAA 23 V_OCT1_08_M01354 TRANSFAC + 87012622 87012637 5.0E-06 AACATATAATTAAGCA 16 V_ARID3A_04_M02735 TRANSFAC - 87012622 87012638 1.0E-05 TTGCTTAATTATATGTT 17 V_TBP_06_M02814 TRANSFAC + 87012572 87012587 2.0E-06 GCATTTTATAAAATGA 16 V_TBP_06_M02814 TRANSFAC - 87012572 87012587 3.0E-06 TCATTTTATAAAATGC 16 V_IRX3_01_M01318 TRANSFAC + 87012618 87012634 1.0E-05 ATGTAACATATAATTAA 17 V_IRX5_01_M01472 TRANSFAC - 87012617 87012633 7.0E-06 TAATTATATGTTACATA 17 V_IRX5_01_M01472 TRANSFAC - 87012646 87012662 8.0E-06 AAAATACATGACTAATT 17 V_FOXO1_Q5_M01216 TRANSFAC - 87012821 87012829 5.0E-06 GAAAACAAA 9 V_SOX17_04_M02904 TRANSFAC + 87012434 87012450 1.0E-06 GAACTTATTCATGTAAC 17 V_VBP_01_M00228 TRANSFAC - 87012615 87012624 7.0E-06 GTTACATAAA 10 V_ZFP105_04_M02931 TRANSFAC - 87012471 87012487 2.0E-06 TTTTTTCAATAGGTTTT 17 V_GFI1_Q6_M01067 TRANSFAC - 87008411 87008423 6.0E-06 AAAAATCAGTTGT 13 V_SOX15_03_M02799 TRANSFAC + 87012527 87012543 5.0E-06 ATGACAACAATAAAGAA 17 V_MTF1_06_M02882 TRANSFAC + 87012478 87012491 1.0E-05 ATTGAAAAAAAAAA 14 V_LBP9_01_M01592 TRANSFAC - 87008556 87008572 8.0E-06 CCAGCAGAAGCTGGCTT 17 V_TAL1_01_M01591 TRANSFAC - 87008448 87008460 1.0E-05 TTTCCTTGTCTGT 13 V_TAL1_01_M01591 TRANSFAC - 87012741 87012753 5.0E-06 TTTTCTTTTCTTT 13 V_CEBPA_01_M00116 TRANSFAC - 87012628 87012641 2.0E-06 TGATTGCTTAATTA 14 V_AREB6_02_M00413 TRANSFAC - 87012637 87012648 6.0E-06 ATTCACCTGATT 12 V_AP1FJ_Q2_M00172 TRANSFAC - 87012604 87012614 2.0E-06 AGTGACTAAGA 11 V_FOXL1_02_M02857 TRANSFAC + 87008403 87008418 5.0E-06 AATACATAACAACTGA 16 V_FOXL1_04_M02753 TRANSFAC + 87012515 87012531 3.0E-06 AGAATATCAACAATGAC 17 V_GFI1B_01_M01058 TRANSFAC - 87012585 87012596 3.0E-06 TAAATCAGATCA 12 V_TCF7_04_M02921 TRANSFAC - 87008380 87008394 1.0E-05 GTGTAATAGAAAAAT 15 V_CEBPB_Q6_M01896 TRANSFAC + 87012631 87012640 7.0E-06 TTAAGCAATC 10 V_SOX8_03_M02808 TRANSFAC - 87012527 87012543 9.0E-06 TTCTTTATTGTTGTCAT 17 V_DMRT2_01_M01147 TRANSFAC + 87008369 87008384 3.0E-06 ATGTTGGATACATTTT 16 V_SRF_06_M02916 TRANSFAC - 87008413 87008429 1.0E-05 TTACAAAAAAATCAGTT 17 V_SRF_06_M02916 TRANSFAC - 87008414 87008430 4.0E-06 GTTACAAAAAAATCAGT 17 V_SRF_06_M02916 TRANSFAC + 87012476 87012492 2.0E-06 CTATTGAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 87012477 87012493 1.0E-06 TATTGAAAAAAAAAAAT 17 V_SRF_06_M02916 TRANSFAC + 87012478 87012494 0.0E+00 ATTGAAAAAAAAAAATC 17 V_SRF_06_M02916 TRANSFAC + 87012479 87012495 0.0E+00 TTGAAAAAAAAAAATCC 17 V_SRF_06_M02916 TRANSFAC + 87012481 87012497 3.0E-06 GAAAAAAAAAAATCCCT 17 V_HFH3_01_M00289 TRANSFAC - 87008397 87008409 1.0E-06 ATGTATTTGTTTA 13 V_FOXJ2_01_M00422 TRANSFAC + 87008394 87008411 0.0E+00 CACTAAACAAATACATAA 18 V_HLF_01_M00260 TRANSFAC - 87012615 87012624 1.0E-05 GTTACATAAA 10 V_SOX1_03_M02802 TRANSFAC - 87008498 87008513 7.0E-06 ATTCAATTCAACTCAG 16 V_FOXO1_01_M00473 TRANSFAC + 87008395 87008404 9.0E-06 ACTAAACAAA 10 V_SOX12_03_M02796 TRANSFAC - 87012517 87012530 4.0E-06 TCATTGTTGATATT 14 V_SOX12_03_M02796 TRANSFAC - 87012526 87012539 0.0E+00 TTATTGTTGTCATT 14 V_PIT1_Q6_M00802 TRANSFAC - 87012528 87012545 8.0E-06 TTTTCTTTATTGTTGTCA 18 V_PIT1_Q6_M00802 TRANSFAC - 87012622 87012639 8.0E-06 ATTGCTTAATTATATGTT 18 V_ELF5_04_M02241 TRANSFAC + 87012862 87012870 4.0E-06 TACTTCCTT 9 V_CEBP_Q2_01_M00912 TRANSFAC - 87012628 87012639 1.0E-06 ATTGCTTAATTA 12 V_LPOLYA_B_M00318 TRANSFAC + 87012534 87012541 7.0E-06 CAATAAAG 8 V_MAFK_04_M02880 TRANSFAC + 87012558 87012572 4.0E-06 GGAAAATGTGCAATG 15 V_HOXD10_01_M01375 TRANSFAC - 87012570 87012586 7.0E-06 CATTTTATAAAATGCAT 17 V_HOXD10_01_M01375 TRANSFAC + 87012573 87012589 5.0E-06 CATTTTATAAAATGATC 17 V_OBOX5_01_M01381 TRANSFAC - 87012484 87012500 7.0E-06 AACAGGGATTTTTTTTT 17 V_SOX5_04_M02910 TRANSFAC + 87012623 87012637 5.0E-06 ACATATAATTAAGCA 15 V_TCF3_05_M02920 TRANSFAC + 87012478 87012492 2.0E-06 ATTGAAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 87012479 87012493 7.0E-06 TTGAAAAAAAAAAAT 15 V_OBOX6_06_M03067 TRANSFAC + 87012484 87012500 7.0E-06 AAAAAAAAATCCCTGTT 17 V_FOXK1_03_M02752 TRANSFAC + 87012515 87012531 1.0E-06 AGAATATCAACAATGAC 17 V_PAX4_04_M00380 TRANSFAC - 87012635 87012664 3.0E-06 AGAAAATACATGACTAATTCACCTGATTGC 30 V_SMAD1_01_M01590 TRANSFAC + 87012735 87012746 1.0E-05 AAAGAGAAAGAA 12 V_CEBPA_Q6_M01866 TRANSFAC + 87012628 87012640 4.0E-06 TAATTAAGCAATC 13 V_NANOG_02_M01247 TRANSFAC + 87012731 87012750 2.0E-06 ATATAAAGAGAAAGAAAAGA 20 V_NANOG_02_M01247 TRANSFAC + 87012735 87012754 2.0E-06 AAAGAGAAAGAAAAGAAAAG 20 V_NKX21_01_M01312 TRANSFAC + 87012751 87012766 6.0E-06 AAAGCCTCTTGAACAA 16

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