Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ALDOA Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 226 aldolase A, fructose-bisphosphate chr16 + 30059410 - 30064910 30064410 Transcription Factor Binding Sites   Download all TFBS in the ALDOA promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX + 30061361 30061376 3.0E-06 CTGCATAATGTATGAG 16 CTCF_MA0139.1 JASPAR - 30066516 30066534 4.0E-06 CTTCCTGCAGGGGGAGCTA 19 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 30064082 30064094 3.0E-06 GTAAACATCAATG 13 SPIC_ETS_full_monomeric_14_1 SELEX + 30061255 30061268 1.0E-06 AAAAAGAGAAAGAA 14 POU3F2_POU_DBD_monomeric_13_1 SELEX + 30061360 30061372 7.0E-06 CCTGCATAATGTA 13 ELF4_ETS_full_monomeric_12_1 SELEX - 30066610 30066621 8.0E-06 ATCCAGGAAGTG 12 RFX4_RFX_DBD_dimeric_16_1 SELEX + 30064423 30064438 0.0E+00 GGTCACCATGGCAACA 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 30064423 30064438 0.0E+00 TGTTGCCATGGTGACC 16 FOXO3_MA0157.1 JASPAR - 30064088 30064095 7.0E-06 TGTAAACA 8 POU3F4_POU_DBD_monomeric_11_1 SELEX + 30061362 30061372 2.0E-06 TGCATAATGTA 11 FOXD1_MA0031.1 JASPAR - 30064087 30064094 7.0E-06 GTAAACAT 8 EWSR1-FLI1_MA0149.1 JASPAR + 30065134 30065151 1.0E-05 GGAAGAGGGGGAGGGAGA 18 EWSR1-FLI1_MA0149.1 JASPAR + 30065142 30065159 6.0E-06 GGGAGGGAGAGAGGTAGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 30065146 30065163 5.0E-06 GGGAGAGAGGTAGGCAGG 18 Pax4_MA0068.1 JASPAR + 30064052 30064081 4.0E-06 AAATAAATATAAATAAAATATAAAAAGTAG 30 POU4F3_POU_DBD_monomeric_16_1 SELEX + 30061361 30061376 1.0E-06 CTGCATAATGTATGAG 16 RFX2_RFX_DBD_dimeric_15_1 SELEX - 30061319 30061333 2.0E-06 TGTTGCCAGGCAAGC 15 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 30064423 30064438 0.0E+00 GGTCACCATGGCAACA 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 30064423 30064438 0.0E+00 TGTTGCCATGGTGACC 16 E2F8_E2F_DBD_dimeric_12_1 SELEX - 30064348 30064359 7.0E-06 CTTCCCGCCTAA 12 SOX14_HMG_DBD_dimeric_13_1 SELEX + 30066720 30066732 6.0E-06 TCAACAACATTTA 13 NFATC1_NFAT_full_dimeric_15_1 SELEX + 30065058 30065072 8.0E-06 TTCCGGCAGAGGAAA 15 RFX2_RFX_DBD_dimeric_16_1 SELEX + 30064423 30064438 0.0E+00 GGTCACCATGGCAACA 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 30064423 30064438 0.0E+00 TGTTGCCATGGTGACC 16 POU1F1_POU_DBD_monomeric_17_1 SELEX + 30061358 30061374 3.0E-06 CTCCTGCATAATGTATG 17 RFX5_RFX_DBD_dimeric_16_3 SELEX + 30064423 30064438 0.0E+00 GGTCACCATGGCAACA 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 30064423 30064438 1.0E-06 TGTTGCCATGGTGACC 16 POU3F1_POU_DBD_monomeric_12_2 SELEX + 30061361 30061372 7.0E-06 CTGCATAATGTA 12 TEAD1_TEA_full_dimeric_17_1 SELEX + 30064998 30065014 3.0E-06 ACATTTCTGGTATTCCT 17 VDR_nuclearreceptor_full_dimeric_16_1 SELEX - 30066476 30066491 2.0E-06 TAGGTCACAGGGTTCA 16 FOXB1_forkhead_full_monomeric_9_1 SELEX - 30064087 30064095 3.0E-06 TGTAAACAT 9 REST_MA0138.2 JASPAR - 30061345 30061365 7.0E-06 TGCAGGAGCACGGGCAGTGCC 21 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 30066837 30066849 3.0E-06 AAGAAAATAAAAT 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 30061245 30061257 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 30061246 30061258 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 30061247 30061259 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 30064082 30064094 8.0E-06 GTAAACATCAATG 13 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 30064087 30064097 8.0E-06 ATTGTAAACAT 11 POU4F1_POU_DBD_monomeric_14_1 SELEX + 30061361 30061374 2.0E-06 CTGCATAATGTATG 14 V_FOXP1_01_M00987 TRANSFAC - 30061245 30061264 1.0E-06 TTCTCTTTTTTTTTTTTTTT 20 V_FOXP1_01_M00987 TRANSFAC - 30061249 30061268 0.0E+00 TTCTTTCTCTTTTTTTTTTT 20 V_KLF15_Q2_M01714 TRANSFAC + 30064583 30064596 0.0E+00 GAGGAGGGGAGTGG 14 V_TGIF_01_M00418 TRANSFAC + 30064955 30064965 2.0E-06 AGCTGTCAGGA 11 V_AP1_Q2_M00173 TRANSFAC + 30062959 30062969 4.0E-06 GATGACTCAGA 11 V_DBX1_01_M01483 TRANSFAC + 30064061 30064077 5.0E-06 TAAATAAAATATAAAAA 17 V_DBX1_01_M01483 TRANSFAC + 30064062 30064078 3.0E-06 AAATAAAATATAAAAAG 17 V_IPF1_02_M01234 TRANSFAC + 30065953 30065962 7.0E-06 AGATAATGAG 10 V_TCF3_01_M01594 TRANSFAC - 30061249 30061261 7.0E-06 TCTTTTTTTTTTT 13 V_FOXO3_02_M02270 TRANSFAC - 30064088 30064095 7.0E-06 TGTAAACA 8 V_ATF5_01_M01295 TRANSFAC + 30064116 30064126 4.0E-06 TTTCTCCCTTT 11 V_FOXA2_04_M02749 TRANSFAC - 30064083 30064099 3.0E-06 ATATTGTAAACATCAAT 17 V_NRSF_Q4_M01028 TRANSFAC + 30061346 30061364 4.0E-06 GCACTGCCCGTGCTCCTGC 19 V_NRSF_Q4_M01028 TRANSFAC - 30061397 30061415 4.0E-06 CCAGACTCGCTGGTGCTGG 19 V_HMGIY_Q3_M01010 TRANSFAC - 30066835 30066849 5.0E-06 ATTTTATTTTCTTCA 15 V_EVI1_04_M00081 TRANSFAC + 30061245 30061259 6.0E-06 AAAAAAAAAAAAAAA 15 V_EVI1_04_M00081 TRANSFAC + 30064062 30064076 3.0E-06 AAATAAAATATAAAA 15 V_BCL6_01_M01183 TRANSFAC - 30061245 30061260 2.0E-06 CTTTTTTTTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 30061246 30061261 9.0E-06 TCTTTTTTTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 30064062 30064077 2.0E-06 TTTTTATATTTTATTT 16 V_BCL6_01_M01183 TRANSFAC - 30064066 30064081 3.0E-06 CTACTTTTTATATTTT 16 V_HOXA13_02_M01297 TRANSFAC + 30066841 30066849 4.0E-06 AAATAAAAT 9 V_DR4_Q2_M00965 TRANSFAC + 30064859 30064875 2.0E-06 CGCCCTCTCCTAACCCC 17 V_ZTA_Q2_M00711 TRANSFAC - 30065959 30065971 4.0E-06 ACACCCTGACTCA 13 V_IRF_Q6_01_M00972 TRANSFAC + 30061256 30061266 2.0E-06 AAAAGAGAAAG 11 V_IRF2_Q6_M01882 TRANSFAC + 30061254 30061269 1.0E-06 AAAAAAGAGAAAGAAA 16 V_NKX25_Q6_M02108 TRANSFAC + 30062980 30062990 1.0E-05 GACACTTGCAG 11 V_FOXO3A_Q1_M01137 TRANSFAC + 30066838 30066849 6.0E-06 AGAAAATAAAAT 12 V_RFX4_03_M02789 TRANSFAC + 30064426 30064440 8.0E-06 CACCATGGCAACAGC 15 V_NERF_Q2_M00531 TRANSFAC + 30066525 30066542 2.0E-06 CTGCAGGAAGCAAGGTTC 18 V_NKX24_01_M01350 TRANSFAC - 30063021 30063036 5.0E-06 CAAGATACTTGAATTC 16 V_TCFAP2E_04_M02926 TRANSFAC + 30061240 30061253 0.0E+00 ATCTCAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 30061242 30061255 2.0E-06 CTCAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 30061243 30061256 3.0E-06 TCAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 30061244 30061257 2.0E-06 CAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 30061245 30061258 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 30061246 30061259 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 30061247 30061260 4.0E-06 AAAAAAAAAAAAAG 14 V_TCFAP2E_04_M02926 TRANSFAC + 30061248 30061261 6.0E-06 AAAAAAAAAAAAGA 14 V_TCFAP2E_04_M02926 TRANSFAC + 30066831 30066844 2.0E-06 TACTTGAAGAAAAT 14 V_OCT2_02_M01761 TRANSFAC + 30061475 30061484 5.0E-06 AGAATATGCA 10 V_OCT2_02_M01761 TRANSFAC - 30062903 30062912 8.0E-06 TGAATACTCA 10 V_NKX62_Q2_M00489 TRANSFAC - 30066725 30066736 1.0E-05 GTAATAAATGTT 12 V_AP1_Q6_M00174 TRANSFAC + 30062959 30062969 4.0E-06 GATGACTCAGA 11 RXRA_VDR_MA0074.1 JASPAR - 30066476 30066490 0.0E+00 AGGTCACAGGGTTCA 15 V_ELF4_04_M02850 TRANSFAC + 30061240 30061256 5.0E-06 ATCTCAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC + 30061241 30061257 0.0E+00 TCTCAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC + 30061242 30061258 3.0E-06 CTCAAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC + 30061243 30061259 2.0E-06 TCAAAAAAAAAAAAAAA 17 V_TST1_01_M00133 TRANSFAC + 30063018 30063032 3.0E-06 GAGGAATTCAAGTAT 15 V_BACH1_01_M00495 TRANSFAC + 30065955 30065969 4.0E-06 ATAATGAGTCAGGGT 15 V_OCT1_02_M00136 TRANSFAC + 30061474 30061488 2.0E-06 CAGAATATGCAGAAT 15 V_ZFP105_03_M02827 TRANSFAC + 30061242 30061256 1.0E-06 CTCAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 30061243 30061257 2.0E-06 TCAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 30061244 30061258 1.0E-06 CAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 30061245 30061259 0.0E+00 AAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 30061246 30061260 0.0E+00 AAAAAAAAAAAAAAG 15 V_ZFP105_03_M02827 TRANSFAC + 30061247 30061261 1.0E-06 AAAAAAAAAAAAAGA 15 V_ZFP105_03_M02827 TRANSFAC + 30061248 30061262 0.0E+00 AAAAAAAAAAAAGAG 15 V_FOXO1_02_M00474 TRANSFAC + 30064084 30064097 2.0E-06 TTGATGTTTACAAT 14 V_XFD3_01_M00269 TRANSFAC - 30064084 30064097 1.0E-06 ATTGTAAACATCAA 14 V_IRX4_01_M01410 TRANSFAC - 30066876 30066892 9.0E-06 ACTCTACATGTTACCCA 17 V_AP1_Q6_01_M00925 TRANSFAC + 30062960 30062968 7.0E-06 ATGACTCAG 9 V_CDX2_01_M01449 TRANSFAC - 30066725 30066740 8.0E-06 CTCAGTAATAAATGTT 16 V_MAZ_Q6_01_M02023 TRANSFAC + 30064582 30064595 5.0E-06 TGAGGAGGGGAGTG 14 V_IRF_Q6_M00772 TRANSFAC - 30061256 30061270 1.0E-06 TTTTCTTTCTCTTTT 15 V_CDX2_Q5_M00729 TRANSFAC + 30066724 30066737 5.0E-06 CAACATTTATTACT 14 V_LXR_DR4_Q3_M00766 TRANSFAC + 30064859 30064874 4.0E-06 CGCCCTCTCCTAACCC 16 V_HNF1_Q6_01_M01011 TRANSFAC + 30064060 30064080 4.0E-06 ATAAATAAAATATAAAAAGTA 21 V_NKX22_02_M01372 TRANSFAC + 30066826 30066842 5.0E-06 AAAGCTACTTGAAGAAA 17 V_HOX13_01_M00023 TRANSFAC + 30066719 30066748 2.0E-06 CTCAACAACATTTATTACTGAGCACCTTCT 30 V_CDX1_01_M01373 TRANSFAC - 30066725 30066740 9.0E-06 CTCAGTAATAAATGTT 16 V_SOX12_04_M02900 TRANSFAC + 30061255 30061270 2.0E-06 AAAAAGAGAAAGAAAA 16 V_TEL2_Q6_M00678 TRANSFAC + 30066609 30066618 6.0E-06 CCACTTCCTG 10 V_AP1_C_M00199 TRANSFAC + 30062960 30062968 6.0E-06 ATGACTCAG 9 V_AP1_C_M00199 TRANSFAC + 30065958 30065966 3.0E-06 ATGAGTCAG 9 V_XFD2_01_M00268 TRANSFAC - 30064084 30064097 2.0E-06 ATTGTAAACATCAA 14 V_RFX_Q6_M00975 TRANSFAC - 30064431 30064439 4.0E-06 CTGTTGCCA 9 V_TBP_06_M02814 TRANSFAC - 30064062 30064077 4.0E-06 TTTTTATATTTTATTT 16 V_TBP_06_M02814 TRANSFAC + 30064064 30064079 2.0E-06 ATAAAATATAAAAAGT 16 V_TBP_06_M02814 TRANSFAC - 30064064 30064079 3.0E-06 ACTTTTTATATTTTAT 16 V_STAT3_03_M01595 TRANSFAC - 30066608 30066623 6.0E-06 GCATCCAGGAAGTGGG 16 V_IK3_01_M00088 TRANSFAC - 30065006 30065018 6.0E-06 TGCCAGGAATACC 13 V_CTCF_01_M01200 TRANSFAC - 30066516 30066535 3.0E-06 GCTTCCTGCAGGGGGAGCTA 20 V_FOXO1_Q5_M01216 TRANSFAC + 30066794 30066802 5.0E-06 AAAAACAAC 9 V_EVI1_06_M00011 TRANSFAC - 30063029 30063037 9.0E-06 ACAAGATAC 9 V_EVI1_06_M00011 TRANSFAC + 30065950 30065958 2.0E-06 ACAAGATAA 9 V_CETS1P54_03_M01078 TRANSFAC - 30065052 30065067 9.0E-06 TCTGCCGGAAATGCCT 16 V_GATA4_Q3_M00632 TRANSFAC + 30061252 30061263 5.0E-06 AAAAAAAAGAGA 12 V_TFIII_Q6_M00706 TRANSFAC + 30064358 30064366 6.0E-06 AGAGGGAGG 9 V_TFIII_Q6_M00706 TRANSFAC + 30065086 30065094 6.0E-06 AGAGGGAGG 9 V_TFIII_Q6_M00706 TRANSFAC + 30065151 30065159 1.0E-05 AGAGGTAGG 9 V_AP1_Q4_01_M00926 TRANSFAC - 30062960 30062967 1.0E-05 TGAGTCAT 8 V_MTF1_06_M02882 TRANSFAC + 30061244 30061257 8.0E-06 CAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 30061245 30061258 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 30061246 30061259 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 30061247 30061260 1.0E-06 AAAAAAAAAAAAAG 14 V_MTF1_06_M02882 TRANSFAC + 30061248 30061261 3.0E-06 AAAAAAAAAAAAGA 14 V_MTF1_06_M02882 TRANSFAC + 30064067 30064080 3.0E-06 AAATATAAAAAGTA 14 V_POU6F1_02_M01462 TRANSFAC + 30065951 30065967 9.0E-06 CAAGATAATGAGTCAGG 17 V_FAC1_01_M00456 TRANSFAC + 30061245 30061258 3.0E-06 AAAAAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC + 30061246 30061259 3.0E-06 AAAAAAAAAAAAAA 14 V_OSR2_04_M02889 TRANSFAC + 30066825 30066840 6.0E-06 GAAAGCTACTTGAAGA 16 V_FOXL1_02_M02857 TRANSFAC + 30064061 30064076 2.0E-06 TAAATAAAATATAAAA 16 V_FOXL1_04_M02753 TRANSFAC - 30064083 30064099 1.0E-06 ATATTGTAAACATCAAT 17 V_FRA1_Q5_M01267 TRANSFAC - 30062960 30062967 1.0E-05 TGAGTCAT 8 V_REST_02_M02256 TRANSFAC - 30061345 30061365 7.0E-06 TGCAGGAGCACGGGCAGTGCC 21 V_OSR1_04_M02888 TRANSFAC + 30066825 30066840 5.0E-06 GAAAGCTACTTGAAGA 16 V_IRF1_Q6_01_M01881 TRANSFAC - 30061255 30061268 2.0E-06 TTCTTTCTCTTTTT 14 V_SRF_06_M02916 TRANSFAC + 30061240 30061256 6.0E-06 ATCTCAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 30061241 30061257 0.0E+00 TCTCAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 30061242 30061258 0.0E+00 CTCAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 30061243 30061259 0.0E+00 TCAAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 30061244 30061260 0.0E+00 CAAAAAAAAAAAAAAAG 17 V_SRF_06_M02916 TRANSFAC + 30061245 30061261 0.0E+00 AAAAAAAAAAAAAAAGA 17 V_SRF_06_M02916 TRANSFAC + 30061246 30061262 1.0E-06 AAAAAAAAAAAAAAGAG 17 V_SRF_06_M02916 TRANSFAC + 30061247 30061263 1.0E-06 AAAAAAAAAAAAAGAGA 17 V_POU6F1_03_M01479 TRANSFAC + 30065951 30065967 7.0E-06 CAAGATAATGAGTCAGG 17 V_EWSR1FLI1_01_M02252 TRANSFAC + 30065134 30065151 1.0E-05 GGAAGAGGGGGAGGGAGA 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 30065142 30065159 6.0E-06 GGGAGGGAGAGAGGTAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 30065146 30065163 5.0E-06 GGGAGAGAGGTAGGCAGG 18 V_FOXO4_01_M00472 TRANSFAC + 30066794 30066804 6.0E-06 AAAAACAACCT 11 V_RNF96_01_M01199 TRANSFAC + 30064518 30064527 7.0E-06 GCCCGCGGCC 10 V_BRF1_01_M01747 TRANSFAC + 30064182 30064194 3.0E-06 GGGTTCAATCCTC 13 V_TCF3_05_M02920 TRANSFAC + 30061241 30061255 4.0E-06 TCTCAAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 30066835 30066849 9.0E-06 TGAAGAAAATAAAAT 15 V_DMRT1_01_M01146 TRANSFAC - 30064070 30064084 9.0E-06 ATGCTACTTTTTATA 15 V_FOXK1_03_M02752 TRANSFAC - 30064083 30064099 2.0E-06 ATATTGTAAACATCAAT 17 V_VDRRXR_01_M01202 TRANSFAC - 30066476 30066490 0.0E+00 AGGTCACAGGGTTCA 15 V_PAX4_04_M00380 TRANSFAC + 30064073 30064102 1.0E-06 AAAAAGTAGCATTGATGTTTACAATATCCC 30 V_SMAD1_01_M01590 TRANSFAC + 30061257 30061268 1.0E-05 AAAGAGAAAGAA 12 V_RFX1_02_M00281 TRANSFAC + 30064422 30064439 0.0E+00 TGGTCACCATGGCAACAG 18 V_CEBPA_Q6_M01866 TRANSFAC - 30066714 30066726 7.0E-06 TTGTTGAGCAAAA 13 V_NANOG_02_M01247 TRANSFAC + 30061243 30061262 7.0E-06 TCAAAAAAAAAAAAAAAGAG 20 V_NANOG_02_M01247 TRANSFAC + 30061246 30061265 6.0E-06 AAAAAAAAAAAAAAGAGAAA 20 V_NANOG_02_M01247 TRANSFAC + 30061253 30061272 1.0E-06 AAAAAAAGAGAAAGAAAAGA 20 V_NANOG_02_M01247 TRANSFAC + 30061257 30061276 3.0E-06 AAAGAGAAAGAAAAGAAATG 20 V_NANOG_02_M01247 TRANSFAC + 30062877 30062896 6.0E-06 AGAAAGAAAGAAAGAAAAAG 20 V_NKX21_01_M01312 TRANSFAC - 30063021 30063036 6.0E-06 CAAGATACTTGAATTC 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.