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SCUBE3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 222663 signal peptide, CUB domain, EGF-like 3 chr6 + 35177189 - 35182689 35182189 Transcription Factor Binding Sites   Download all TFBS in the SCUBE3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NKX2-8_homeodomain_full_monomeric_9_1 SELEX - 35184890 35184898 8.0E-06 GCACTTGAA 9 TBX21_TBX_full_dimeric_16_1 SELEX + 35185994 35186009 3.0E-06 AGTGTGCATTCACACA 16 NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX - 35183183 35183195 1.0E-06 AAGAGGTCAAGGG 13 TBX5_TBX_DBD_dimeric_20_1 SELEX + 35185993 35186012 8.0E-06 AAGTGTGCATTCACACACGT 20 TBX5_TBX_DBD_dimeric_20_1 SELEX - 35185993 35186012 2.0E-06 ACGTGTGTGAATGCACACTT 20 GRHL1_CP2_full_dimeric_12_1 SELEX + 35185918 35185929 1.0E-06 AGAACCGGTTTG 12 GRHL1_CP2_full_dimeric_12_1 SELEX - 35185918 35185929 2.0E-06 CAAACCGGTTCT 12 EWSR1-FLI1_MA0149.1 JASPAR + 35181741 35181758 2.0E-06 GGAAGAAAGAGAGGCAGA 18 EWSR1-FLI1_MA0149.1 JASPAR + 35181745 35181762 2.0E-06 GAAAGAGAGGCAGAAAGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 35182277 35182294 6.0E-06 CAAGGTAAGGAAGGAGGG 18 NFKB1_MA0105.1 JASPAR + 35181925 35181935 2.0E-06 GGGGGTTCCCC 11 NFKB1_MA0105.1 JASPAR - 35181925 35181935 5.0E-06 GGGGAACCCCC 11 SPIB_ETS_DBD_monomeric_14_1 SELEX + 35186068 35186081 3.0E-06 GGAAAAAGGAAGTG 14 NFKB2_NFAT_DBD_dimeric_13_1 SELEX + 35181924 35181936 4.0E-06 CGGGGGTTCCCCT 13 NFKB2_NFAT_DBD_dimeric_13_1 SELEX - 35181924 35181936 5.0E-06 AGGGGAACCCCCG 13 SP1_MA0079.2 JASPAR + 35182101 35182110 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR + 35183202 35183211 3.0E-06 CCCCTCCCCC 10 RARA_nuclearreceptor_full_dimeric_17_1 SELEX - 35183187 35183203 5.0E-06 GGTACAGCAAGAGGTCA 17 TFCP2_CP2_full_dimeric_10_1 SELEX + 35185919 35185928 4.0E-06 GAACCGGTTT 10 TFCP2_CP2_full_dimeric_10_1 SELEX - 35185919 35185928 1.0E-06 AAACCGGTTC 10 TBX4_TBX_DBD_dimeric_20_1 SELEX + 35185993 35186012 3.0E-06 AAGTGTGCATTCACACACGT 20 TBX4_TBX_DBD_dimeric_20_1 SELEX - 35185993 35186012 3.0E-06 ACGTGTGTGAATGCACACTT 20 NFKB1_NFAT_DBD_dimeric_13_1 SELEX + 35181924 35181936 2.0E-06 CGGGGGTTCCCCT 13 NFKB1_NFAT_DBD_dimeric_13_1 SELEX - 35181924 35181936 1.0E-06 AGGGGAACCCCCG 13 TBX20_TBX_full_dimeric_16_1 SELEX + 35185972 35185987 2.0E-06 GGGTGTGAGTTTGGGA 16 TBX20_TBX_full_dimeric_16_1 SELEX + 35186009 35186024 8.0E-06 ACGTGTGAATGTGTGT 16 NKX2-3_homeodomain_full_monomeric_10_1 SELEX - 35184890 35184899 7.0E-06 AGCACTTGAA 10 MGA_TBX_DBD_dimeric_18_1 SELEX + 35185993 35186010 7.0E-06 AAGTGTGCATTCACACAC 18 MGA_TBX_DBD_dimeric_18_1 SELEX - 35185993 35186010 8.0E-06 GTGTGTGAATGCACACTT 18 NR3C1_MA0113.1 JASPAR - 35183164 35183181 9.0E-06 GAGGAGAAACTGTCCCGA 18 HMX2_homeodomain_DBD_monomeric_11_1 SELEX + 35186305 35186315 9.0E-06 ACCACTTATAA 11 GRHL1_CP2_DBD_dimeric_10_1 SELEX + 35185919 35185928 4.0E-06 GAACCGGTTT 10 GRHL1_CP2_DBD_dimeric_10_1 SELEX - 35185919 35185928 1.0E-06 AAACCGGTTC 10 SPI1_ETS_full_monomeric_14_1 SELEX + 35186068 35186081 5.0E-06 GGAAAAAGGAAGTG 14 REST_MA0138.2 JASPAR - 35182307 35182327 7.0E-06 CCCAGCAGCCAGGACAGCCCC 21 V_AP2ALPHA_Q6_M01857 TRANSFAC + 35182068 35182078 2.0E-06 AGCCCCCGGCC 11 V_SPI1_01_M01203 TRANSFAC + 35186068 35186084 3.0E-06 GGAAAAAGGAAGTGGGG 17 V_ZFP410_04_M02936 TRANSFAC + 35181782 35181798 4.0E-06 TTTCCCCTCCCCTTTCT 17 V_BCL6B_03_M02740 TRANSFAC + 35183043 35183058 5.0E-06 TCCCTCTAGGAATTAA 16 V_ZFX_01_M01593 TRANSFAC - 35182294 35182309 2.0E-06 CCCCAGGCCGCGCGCC 16 V_HMGIY_Q3_M01010 TRANSFAC + 35186088 35186102 2.0E-06 TATGCATTTTGTTTT 15 V_MTF1_Q4_M00650 TRANSFAC + 35182401 35182414 8.0E-06 TGTGCACCCGGACT 14 V_IRF_Q6_01_M00972 TRANSFAC + 35183560 35183570 6.0E-06 AGAACTGAAAC 11 V_AP2_Q6_01_M00915 TRANSFAC - 35182301 35182313 0.0E+00 CAGCCCCCAGGCC 13 V_MAF_Q6_M00648 TRANSFAC + 35186070 35186085 1.0E-05 AAAAAGGAAGTGGGGC 16 V_SP1_03_M02281 TRANSFAC + 35182101 35182110 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC + 35183202 35183211 3.0E-06 CCCCTCCCCC 10 V_HFH4_01_M00742 TRANSFAC + 35185877 35185889 7.0E-06 ATGAGATTGTTTT 13 V_PITX2_Q6_M02114 TRANSFAC - 35181867 35181876 1.0E-06 TGTAATCCCA 10 V_NKX24_01_M01350 TRANSFAC - 35184887 35184902 8.0E-06 ACAAGCACTTGAAAAA 16 V_HEN1_01_M00068 TRANSFAC - 35185931 35185952 3.0E-06 ACAGGTCCCAGCTGCTCACATC 22 V_PU1_Q4_M01172 TRANSFAC - 35181735 35181753 1.0E-06 CTCTCTTTCTTCCTCTCTC 19 V_PU1_Q4_M01172 TRANSFAC - 35186069 35186087 2.0E-06 TTGCCCCACTTCCTTTTTC 19 V_NR3C1_01_M02219 TRANSFAC - 35183164 35183181 9.0E-06 GAGGAGAAACTGTCCCGA 18 V_ELF4_04_M02850 TRANSFAC - 35185879 35185895 1.0E-06 TTTCAAAAAACAATCTC 17 V_ELF4_04_M02850 TRANSFAC - 35185880 35185896 7.0E-06 GTTTCAAAAAACAATCT 17 V_BACH1_01_M00495 TRANSFAC - 35186024 35186038 6.0E-06 ACCCTGAGTCATGCA 15 V_SOX7_03_M02807 TRANSFAC - 35185873 35185894 8.0E-06 TTCAAAAAACAATCTCATTTGA 22 V_OCT1_02_M00136 TRANSFAC + 35186083 35186097 4.0E-06 GGCAATATGCATTTT 15 V_ZFP105_03_M02827 TRANSFAC - 35185880 35185894 1.0E-06 TTCAAAAAACAATCT 15 V_RXRA_03_M02791 TRANSFAC + 35183182 35183198 9.0E-06 CCCCTTGACCTCTTGCT 17 V_KROX_Q6_M00982 TRANSFAC + 35182091 35182104 1.0E-05 GGCGCCCCCTCCCC 14 V_ZBP89_Q4_M01816 TRANSFAC + 35183203 35183212 4.0E-06 CCCTCCCCCA 10 V_AMEF2_Q6_M00403 TRANSFAC + 35185053 35185070 6.0E-06 GTGGTTAAAAAGACCTAA 18 V_AP1_Q6_01_M00925 TRANSFAC + 35186027 35186035 7.0E-06 ATGACTCAG 9 V_IK1_01_M00086 TRANSFAC + 35185980 35185992 9.0E-06 GTTTGGGAATGTG 13 V_MAZ_Q6_01_M02023 TRANSFAC - 35182097 35182110 0.0E+00 GGGGGAGGGGAGGG 14 V_IRF_Q6_M00772 TRANSFAC - 35183560 35183574 5.0E-06 TAGTGTTTCAGTTCT 15 V_NKX22_02_M01372 TRANSFAC - 35184886 35184902 2.0E-06 ACAAGCACTTGAAAAAC 17 V_ISRE_01_M00258 TRANSFAC + 35183170 35183184 8.0E-06 CAGTTTCTCCTCCCC 15 V_ELF5_01_M01197 TRANSFAC + 35186071 35186081 6.0E-06 AAAAGGAAGTG 11 V_REST_01_M01256 TRANSFAC + 35182303 35182324 1.0E-06 CCTGGGGGCTGTCCTGGCTGCT 22 V_HBP1_03_M02762 TRANSFAC - 35181384 35181399 5.0E-06 GCAATCAATGGATCAA 16 V_AP1_C_M00199 TRANSFAC + 35186027 35186035 6.0E-06 ATGACTCAG 9 V_STAT4_Q5_M02117 TRANSFAC + 35186310 35186319 0.0E+00 TTATAAGAAA 10 V_AP1_Q2_01_M00924 TRANSFAC + 35186028 35186039 8.0E-06 TGACTCAGGGTG 12 V_NKX32_02_M01482 TRANSFAC + 35186301 35186317 3.0E-06 CATGACCACTTATAAGA 17 V_GATA4_Q3_M00632 TRANSFAC + 35185847 35185858 7.0E-06 AGAAAGAAGACA 12 V_AP1_Q4_01_M00926 TRANSFAC - 35186027 35186034 1.0E-05 TGAGTCAT 8 V_TTF1_Q5_M02034 TRANSFAC - 35184887 35184900 2.0E-06 AAGCACTTGAAAAA 14 V_MAZR_01_M00491 TRANSFAC - 35181782 35181794 7.0E-06 AGGGGAGGGGAAA 13 V_FOXL1_02_M02857 TRANSFAC - 35186092 35186107 3.0E-06 CAACTAAAACAAAATG 16 V_HEN1_02_M00058 TRANSFAC - 35185931 35185952 1.0E-05 ACAGGTCCCAGCTGCTCACATC 22 V_LUN1_01_M00480 TRANSFAC - 35181844 35181860 1.0E-06 TCCCAGCTTCGCCGGGA 17 V_ESRRA_04_M02852 TRANSFAC - 35183182 35183198 1.0E-05 AGCAAGAGGTCAAGGGG 17 V_MEIS1_01_M00419 TRANSFAC + 35183033 35183044 7.0E-06 CTCTGACAGATC 12 V_NKX22_01_M00485 TRANSFAC + 35184891 35184900 6.0E-06 TCAAGTGCTT 10 V_FRA1_Q5_M01267 TRANSFAC - 35186027 35186034 1.0E-05 TGAGTCAT 8 V_NRSF_01_M00256 TRANSFAC - 35182307 35182327 5.0E-06 CCCAGCAGCCAGGACAGCCCC 21 V_ASCL2_04_M02841 TRANSFAC + 35181781 35181796 6.0E-06 GTTTCCCCTCCCCTTT 16 V_ASCL2_04_M02841 TRANSFAC - 35181860 35181875 1.0E-06 GTAATCCCACCCAATT 16 V_PITX2_Q2_M00482 TRANSFAC - 35181866 35181876 2.0E-06 TGTAATCCCAC 11 V_FOX_Q2_M00809 TRANSFAC + 35184901 35184913 7.0E-06 GTCTGTATATTTT 13 V_REST_02_M02256 TRANSFAC - 35182307 35182327 7.0E-06 CCCAGCAGCCAGGACAGCCCC 21 V_ZFP281_01_M01597 TRANSFAC - 35182101 35182111 3.0E-06 AGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 35183202 35183212 1.0E-06 TGGGGGAGGGG 11 V_MEF3_B_M00319 TRANSFAC + 35185082 35185094 0.0E+00 GGCTCAGGTTACA 13 V_SOX14_04_M02901 TRANSFAC + 35181859 35181875 1.0E-06 GAATTGGGTGGGATTAC 17 V_SOX14_04_M02901 TRANSFAC + 35183446 35183462 8.0E-06 GTATTGGATGGGCTCCT 17 V_ZFP281_04_M02831 TRANSFAC + 35182099 35182113 4.0E-06 CTCCCCTCCCCCTCC 15 V_ZFP281_04_M02831 TRANSFAC + 35183200 35183214 1.0E-06 TACCCCTCCCCCATC 15 V_SRF_06_M02916 TRANSFAC - 35185880 35185896 1.0E-06 GTTTCAAAAAACAATCT 17 V_EWSR1FLI1_01_M02252 TRANSFAC + 35181741 35181758 2.0E-06 GGAAGAAAGAGAGGCAGA 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 35181745 35181762 2.0E-06 GAAAGAGAGGCAGAAAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 35182277 35182294 6.0E-06 CAAGGTAAGGAAGGAGGG 18 V_PLAGL1_03_M02786 TRANSFAC - 35182086 35182101 5.0E-06 GAGGGGGCGCCCCGCC 16 V_FOXO1_01_M00473 TRANSFAC - 35185882 35185891 3.0E-06 AAAAAACAAT 10 V_DR3_Q4_M00966 TRANSFAC - 35181747 35181767 5.0E-06 CACGCCCTTTCTGCCTCTCTT 21 V_RFX3_04_M02788 TRANSFAC - 35184767 35184789 1.0E-06 GTTTACCCTTAGCAACTACGTCA 23 V_FOXO4_01_M00472 TRANSFAC - 35185880 35185890 3.0E-06 AAAAACAATCT 11 V_UF1H3BETA_Q6_M01068 TRANSFAC - 35182100 35182113 2.0E-06 GGAGGGGGAGGGGA 14 V_HMEF2_Q6_M00406 TRANSFAC + 35185055 35185070 4.0E-06 GGTTAAAAAGACCTAA 16 V_NANOG_02_M01247 TRANSFAC + 35183236 35183255 6.0E-06 TTATATGGACAAAAAGAAAA 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.