Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

C10orf35 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 219738 chromosome 10 open reading frame 35 chr10 + 71385002 - 71390502 71390002 Transcription Factor Binding Sites   Download all TFBS in the C10orf35 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 71389935 71389953 9.0E-06 CGGCCTACAGAGGGCGATG 19 HSF2_HSF_DBD_trimeric_13_1 SELEX - 71388852 71388864 8.0E-06 TTCTGGCACTTTC 13 TBX19_TBX_DBD_dimeric_20_1 SELEX + 71388844 71388863 4.0E-06 CTTGACACGAAAGTGCCAGA 20 TBX19_TBX_DBD_dimeric_20_1 SELEX - 71388844 71388863 6.0E-06 TCTGGCACTTTCGTGTCAAG 20 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX - 71388782 71388795 7.0E-06 GTTATGATCATTAC 14 HSF4_HSF_DBD_trimeric_13_1 SELEX - 71388852 71388864 6.0E-06 TTCTGGCACTTTC 13 T_TBX_full_dimeric_16_1 SELEX + 71388846 71388861 6.0E-06 TGACACGAAAGTGCCA 16 T_TBX_full_dimeric_16_1 SELEX - 71388846 71388861 6.0E-06 TGGCACTTTCGTGTCA 16 TBX1_TBX_DBD_dimeric_20_1 SELEX - 71388870 71388889 3.0E-06 GTGTTTGAATGTTGGTGTGA 20 V_HSF1_Q6_M01023 TRANSFAC - 71388849 71388865 1.0E-06 TTTCTGGCACTTTCGTG 17 V_ZFX_01_M01593 TRANSFAC - 71390042 71390057 6.0E-06 CTCCGGGCCTCGGCGG 16 V_GATA3_03_M00351 TRANSFAC + 71388784 71388793 8.0E-06 AATGATCATA 10 V_EBOX_Q6_01_M01034 TRANSFAC - 71389999 71390008 4.0E-06 CCACCTGACC 10 V_CDP_04_M01344 TRANSFAC - 71388783 71388797 9.0E-06 CTGTTATGATCATTA 15 V_ZNF219_01_M01122 TRANSFAC + 71389896 71389907 9.0E-06 CGCCCCCAACCC 12 V_HOXA6_01_M01392 TRANSFAC - 71388777 71388792 9.0E-06 ATGATCATTACCTCTT 16 Ddit3_Cebpa_MA0019.1 JASPAR + 71389918 71389929 8.0E-06 AGGTGCAATTCC 12 V_KROX_Q6_M00982 TRANSFAC + 71389894 71389907 5.0E-06 GCCGCCCCCAACCC 14 V_CUX1_04_M02959 TRANSFAC - 71388783 71388797 9.0E-06 CTGTTATGATCATTA 15 V_PPARA_02_M00518 TRANSFAC - 71389874 71389892 5.0E-06 CGGGGTGCTGGGGGTCGGG 19 V_ICSBP_Q6_M00699 TRANSFAC + 71388847 71388858 7.0E-06 GACACGAAAGTG 12 V_ELK1_01_M00007 TRANSFAC - 71389984 71389999 6.0E-06 CTCACAGGAAGCGCGC 16 V_TTF1_Q5_M02034 TRANSFAC + 71388839 71388852 7.0E-06 AAGCACTTGACACG 14 V_CNOT3_01_M01253 TRANSFAC + 71389967 71389976 8.0E-06 GGCCGCGCCC 10 V_NKX22_01_M00485 TRANSFAC - 71388839 71388848 6.0E-06 TCAAGTGCTT 10 V_HSF2_02_M01244 TRANSFAC + 71388852 71388864 9.0E-06 GAAAGTGCCAGAA 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.