Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

DDX26B Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 203522 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B chrX + 134649554 - 134655054 134654554 Transcription Factor Binding Sites   Download all TFBS in the DDX26B promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 134654496 134654513 5.0E-06 GCCATTGGCTGCCAATTA 18 HSFY2_HSF_DBD_dimer-of-dimers_15_1 SELEX + 134654336 134654350 2.0E-06 AACTAATCATTCGAA 15 POU2F1_POU_DBD_dimeric_14_1 SELEX + 134654475 134654488 0.0E+00 AATGAATATGCAAA 14 POU2F1_POU_DBD_dimeric_14_1 SELEX - 134654475 134654488 0.0E+00 TTTGCATATTCATT 14 Pax6_MA0069.1 JASPAR + 134654021 134654034 5.0E-06 TTTAAGCTTTAGTT 14 NHLH1_MA0048.1 JASPAR + 134655160 134655171 2.0E-06 CCGCAGCTGCGC 12 NHLH1_MA0048.1 JASPAR - 134655160 134655171 2.0E-06 GCGCAGCTGCGG 12 RFX4_RFX_DBD_dimeric_16_1 SELEX + 134656051 134656066 5.0E-06 AGTTACCTTAGCTACT 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 134656051 134656066 3.0E-06 AGTAGCTAAGGTAACT 16 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 134654481 134654489 2.0E-06 TATGCAAAT 9 RXRG_nuclearreceptor_full_dimeric_14_1 SELEX + 134654418 134654431 3.0E-06 GGGTTCAAACTTCA 14 POU2F3_POU_DBD_monomeric_9_1 SELEX + 134654481 134654489 2.0E-06 TATGCAAAT 9 EWSR1-FLI1_MA0149.1 JASPAR - 134655114 134655131 6.0E-06 GGAAAGGAGGGGGGAGGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 134655578 134655595 4.0E-06 GAAAGGAGGGAGGGGAGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 134655582 134655599 1.0E-06 GGAGGGAGGGGAGGGAGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 134655586 134655603 6.0E-06 GGAGGGGAGGGAGGAGCG 18 EWSR1-FLI1_MA0149.1 JASPAR + 134656223 134656240 2.0E-06 GAAAGAAAGGAAGGGGAG 18 POU1F1_POU_DBD_monomeric_14_1 SELEX + 134654479 134654492 3.0E-06 AATATGCAAATACC 14 POU2F2_POU_DBD_monomeric_11_1 SELEX + 134654480 134654490 0.0E+00 ATATGCAAATA 11 POU3F4_POU_DBD_monomeric_9_1 SELEX + 134654481 134654489 2.0E-06 TATGCAAAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 134654481 134654489 2.0E-06 TATGCAAAT 9 Pax4_MA0068.1 JASPAR - 134654139 134654168 2.0E-06 AAAATATTTCAGAAGCAGCAAACTTCTTTC 30 SPIB_ETS_DBD_monomeric_14_1 SELEX + 134650428 134650441 9.0E-06 ACAAAAGGGAAGTT 14 TEAD1_TEA_full_monomeric_10_1 SELEX - 134654114 134654123 2.0E-06 CACATTCCTT 10 REL_MA0101.1 JASPAR - 134656081 134656090 6.0E-06 TGGAATTTCC 10 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 134656051 134656066 9.0E-06 AGTAGCTAAGGTAACT 16 POU3F3_POU_DBD_monomeric_13_1 SELEX + 134654479 134654491 2.0E-06 AATATGCAAATAC 13 POU6F2_POU_DBD_dimeric_16_1 SELEX - 134656166 134656181 7.0E-06 TTTATGATGTAAATAG 16 POU6F2_POU_DBD_dimeric_16_1 SELEX + 134658810 134658825 5.0E-06 TTAAGTACCACATAAA 16 POU6F2_POU_DBD_dimeric_16_1 SELEX - 134658810 134658825 4.0E-06 TTTATGTGGTACTTAA 16 RELA_MA0107.1 JASPAR - 134656081 134656090 3.0E-06 TGGAATTTCC 10 Pou2f2_POU_DBD_dimeric_14_1 SELEX + 134654475 134654488 0.0E+00 AATGAATATGCAAA 14 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 134654475 134654488 0.0E+00 TTTGCATATTCATT 14 POU2F3_POU_DBD_dimeric_12_1 SELEX + 134654476 134654487 0.0E+00 ATGAATATGCAA 12 POU2F3_POU_DBD_dimeric_12_1 SELEX - 134654476 134654487 1.0E-06 TTGCATATTCAT 12 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX + 134654418 134654433 6.0E-06 GGGTTCAAACTTCAAC 16 YY2_C2H2_full_monomeric_11_1 SELEX - 134655513 134655523 4.0E-06 TCCGCCATGTT 11 SOX7_HMG_full_dimeric_16_1 SELEX + 134650375 134650390 9.0E-06 AACAGTGAGCAGTGGC 16 HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX + 134654418 134654432 2.0E-06 GGGTTCAAACTTCAA 15 PRDM4_C2H2_full_monomeric_13_1 SELEX + 134654708 134654720 6.0E-06 TTTCAAGTTCCCT 13 ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 134654693 134654707 4.0E-06 TACACACGCTCACAC 15 ZSCAN4_C2H2_full_monomeric_15_1 SELEX - 134655071 134655085 2.0E-06 TCCACACCCTGAAAT 15 RFX2_RFX_DBD_dimeric_16_1 SELEX + 134656051 134656066 8.0E-06 AGTTACCTTAGCTACT 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 134656051 134656066 7.0E-06 AGTAGCTAAGGTAACT 16 TBX20_TBX_full_dimeric_16_1 SELEX - 134654694 134654709 7.0E-06 AAGTGTGAGCGTGTGT 16 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 134654496 134654513 2.0E-06 GCCATTGGCTGCCAATTA 18 POU1F1_POU_DBD_monomeric_17_1 SELEX + 134654473 134654489 5.0E-06 CTAATGAATATGCAAAT 17 POU1F1_POU_DBD_monomeric_17_1 SELEX + 134656431 134656447 9.0E-06 TGCTTGCATATTGAAAT 17 RFX5_RFX_DBD_dimeric_16_3 SELEX + 134656051 134656066 6.0E-06 AGTTACCTTAGCTACT 16 POU3F1_POU_DBD_monomeric_12_1 SELEX + 134654480 134654491 2.0E-06 ATATGCAAATAC 12 Stat3_MA0144.1 JASPAR + 134654133 134654142 7.0E-06 TGCCAGGAAA 10 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX + 134658818 134658826 9.0E-06 CACATAAAA 9 POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 134654476 134654487 0.0E+00 ATGAATATGCAA 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 134654476 134654487 0.0E+00 TTGCATATTCAT 12 Pou5f1_MA0142.1 JASPAR + 134654475 134654489 9.0E-06 AATGAATATGCAAAT 15 POU2F1_POU_DBD_monomeric_12_1 SELEX + 134654479 134654490 0.0E+00 AATATGCAAATA 12 LHX6_homeodomain_full_dimeric_12_1 SELEX + 134654194 134654205 7.0E-06 CGATTGCAGTTA 12 TEAD1_TEA_full_dimeric_17_1 SELEX - 134654047 134654063 6.0E-06 GCATTCCACATATATCT 17 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX + 134654418 134654431 2.0E-06 GGGTTCAAACTTCA 14 TEAD4_TEA_DBD_monomeric_10_1 SELEX - 134654114 134654123 2.0E-06 CACATTCCTT 10 SPI1_ETS_full_monomeric_14_1 SELEX + 134650428 134650441 1.0E-05 ACAAAAGGGAAGTT 14 IRF3_IRF_full_trimeric_21_1 SELEX - 134654024 134654044 4.0E-06 TTAGAAAGGAAACTAAAGCTT 21 ETV6_ETS_full_dimeric_15_1 SELEX + 134655272 134655286 5.0E-06 CGGGAAGCGGGAGCA 15 POU3F3_POU_DBD_dimeric_12_1 SELEX + 134654476 134654487 0.0E+00 ATGAATATGCAA 12 POU3F3_POU_DBD_dimeric_12_1 SELEX - 134654476 134654487 3.0E-06 TTGCATATTCAT 12 POU3F2_POU_DBD_monomeric_12_1 SELEX + 134654480 134654491 3.0E-06 ATATGCAAATAC 12 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 134654496 134654513 5.0E-06 GCCATTGGCTGCCAATTA 18 NHLH1_bHLH_full_dimeric_10_1 SELEX + 134655161 134655170 2.0E-06 CGCAGCTGCG 10 NHLH1_bHLH_full_dimeric_10_1 SELEX - 134655161 134655170 2.0E-06 CGCAGCTGCG 10 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX + 134654418 134654431 5.0E-06 GGGTTCAAACTTCA 14 V_HSF2_01_M00147 TRANSFAC + 134654210 134654219 5.0E-06 AGAATTTTCT 10 V_NFKAPPAB65_01_M00052 TRANSFAC - 134656081 134656090 1.0E-06 TGGAATTTCC 10 V_OSR1_03_M02784 TRANSFAC - 134656057 134656072 0.0E+00 AGTAACAGTAGCTAAG 16 V_AREB6_01_M00412 TRANSFAC - 134655195 134655207 3.0E-06 CATGTACCTGTCT 13 V_SPI1_01_M01203 TRANSFAC + 134650428 134650444 7.0E-06 ACAAAAGGGAAGTTGCC 17 V_NFKB_Q6_01_M00774 TRANSFAC + 134656076 134656091 2.0E-06 TCATTGGAAATTCCAG 16 V_APOLYA_B_M00310 TRANSFAC - 134656389 134656403 5.0E-06 TTTAAATTCCATTTT 15 V_HNF1_02_M01379 TRANSFAC - 134654196 134654212 9.0E-06 TCTTCGCTAACTGCAAT 17 V_ZEC_01_M01081 TRANSFAC + 134650431 134650443 7.0E-06 AAAGGGAAGTTGC 13 V_POU5F1_02_M02245 TRANSFAC + 134654475 134654489 9.0E-06 AATGAATATGCAAAT 15 V_OCT1_Q5_01_M00930 TRANSFAC - 134654481 134654491 4.0E-06 GTATTTGCATA 11 V_ISL2_01_M01328 TRANSFAC + 134654314 134654329 5.0E-06 AAAAATCCATTTAAAC 16 V_IRF2_Q6_M01882 TRANSFAC - 134654029 134654044 8.0E-06 TTAGAAAGGAAACTAA 16 V_CEBP_C_M00201 TRANSFAC - 134654991 134655008 8.0E-06 CGCCTTTGGCAATGTCCA 18 V_OCT1_01_M00135 TRANSFAC + 134654476 134654494 0.0E+00 ATGAATATGCAAATACCAC 19 V_POU2F3_01_M01476 TRANSFAC + 134654478 134654493 1.0E-06 GAATATGCAAATACCA 16 V_IRF3_05_M02767 TRANSFAC - 134654030 134654043 0.0E+00 TAGAAAGGAAACTA 14 V_MAF_Q6_M00648 TRANSFAC + 134650430 134650445 0.0E+00 AAAAGGGAAGTTGCCA 16 V_MAF_Q6_M00648 TRANSFAC + 134654137 134654152 3.0E-06 AGGAAAGAAGTTTGCT 16 V_SPZ1_01_M00446 TRANSFAC - 134655300 134655314 1.0E-05 GCAGGGGGGTAAGCA 15 V_OCT_C_M00210 TRANSFAC - 134654480 134654492 6.0E-06 GGTATTTGCATAT 13 V_NERF_Q2_M00531 TRANSFAC + 134654133 134654150 8.0E-06 TGCCAGGAAAGAAGTTTG 18 V_AREB6_04_M00415 TRANSFAC + 134656071 134656079 8.0E-06 CTGTTTCAT 9 V_SP1_02_M01303 TRANSFAC - 134655979 134655989 5.0E-06 GGGGTGGGGAG 11 V_PU1_Q4_M01172 TRANSFAC - 134654664 134654682 4.0E-06 CCCTCCCCCTTCCTCTCTT 19 V_OCT2_02_M01761 TRANSFAC + 134654477 134654486 1.0E-06 TGAATATGCA 10 V_OCT2_02_M01761 TRANSFAC - 134654477 134654486 2.0E-06 TGCATATTCA 10 V_BCL6_02_M01185 TRANSFAC + 134656143 134656156 4.0E-06 AGCTTTTTAGGGAT 14 V_GC_01_M00255 TRANSFAC + 134654730 134654743 5.0E-06 AGGAGGTGGGGCTG 14 V_SPI1_03_M02078 TRANSFAC - 134654396 134654405 1.0E-05 AGGGGAAGTG 10 V_OCT1_02_M00136 TRANSFAC + 134654476 134654490 0.0E+00 ATGAATATGCAAATA 15 V_OCT1_02_M00136 TRANSFAC - 134656431 134656445 5.0E-06 TTCAATATGCAAGCA 15 V_SOX8_04_M02912 TRANSFAC - 134654470 134654483 5.0E-06 ATATTCATTAGATG 14 V_CREL_01_M00053 TRANSFAC - 134656081 134656090 6.0E-06 TGGAATTTCC 10 V_HSF1_01_M00146 TRANSFAC + 134654210 134654219 7.0E-06 AGAATTTTCT 10 V_HOXA3_07_M02869 TRANSFAC + 134654315 134654328 6.0E-06 AAAATCCATTTAAA 14 V_MAZ_Q6_01_M02023 TRANSFAC + 134655583 134655596 0.0E+00 GAGGGAGGGGAGGG 14 V_AP2BETA_Q3_M01858 TRANSFAC + 134650482 134650497 3.0E-06 GCTTTGGCCTGAAGGG 16 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 134654480 134654490 1.0E-05 TATTTGCATAT 11 V_IRF_Q6_M00772 TRANSFAC + 134654028 134654042 1.0E-06 TTTAGTTTCCTTTCT 15 V_HMX1_01_M00433 TRANSFAC + 134656120 134656129 8.0E-06 CAAGTGCGAA 10 V_ISRE_01_M00258 TRANSFAC + 134654030 134654044 3.0E-06 TAGTTTCCTTTCTAA 15 V_ELF5_01_M01197 TRANSFAC + 134650409 134650419 8.0E-06 ATAAGGAAGCA 11 V_XBP1_02_M01770 TRANSFAC + 134654939 134654949 6.0E-06 ATAGACACGTC 11 V_OCT1_04_M00138 TRANSFAC + 134654474 134654496 0.0E+00 TAATGAATATGCAAATACCACAT 23 V_OCT1_04_M00138 TRANSFAC - 134656161 134656183 2.0E-06 AATTTATGATGTAAATAGGTAGA 23 V_OCT1_04_M00138 TRANSFAC + 134656432 134656454 1.0E-06 GCTTGCATATTGAAATTTTAAAA 23 V_REX1_03_M01744 TRANSFAC + 134655513 134655524 4.0E-06 AACATGGCGGAC 12 V_EVI1_Q3_M02002 TRANSFAC - 134656218 134656226 6.0E-06 TTTCTTGTC 9 V_SPIB_01_M01204 TRANSFAC + 134650428 134650444 3.0E-06 ACAAAAGGGAAGTTGCC 17 V_OCAB_Q6_M02113 TRANSFAC + 134654480 134654490 0.0E+00 ATATGCAAATA 11 V_ISGF3G_03_M02771 TRANSFAC - 134654029 134654043 1.0E-06 TAGAAAGGAAACTAA 15 V_STAT3_03_M01595 TRANSFAC + 134654131 134654146 6.0E-06 CCTGCCAGGAAAGAAG 16 V_SOX11_03_M02795 TRANSFAC + 134650422 134650438 2.0E-06 AGTAGAACAAAAGGGAA 17 V_BLIMP1_Q6_M01066 TRANSFAC - 134654268 134654283 4.0E-06 AGAAGAGTGAATTTGA 16 V_OCT1_B_M00342 TRANSFAC + 134654481 134654490 0.0E+00 TATGCAAATA 10 V_OCT_Q6_M00795 TRANSFAC - 134654481 134654491 2.0E-06 GTATTTGCATA 11 V_NKX32_02_M01482 TRANSFAC - 134654037 134654053 1.0E-05 TATATCTACTTAGAAAG 17 V_PTF1BETA_Q6_M00657 TRANSFAC + 134655460 134655473 9.0E-06 GGAGAAACCGCAGG 14 V_ELF1_Q6_M00746 TRANSFAC - 134654397 134654408 7.0E-06 GTAAGGGGAAGT 12 V_ELF1_Q6_M00746 TRANSFAC - 134654799 134654810 7.0E-06 GCAAGAGGAAGA 12 V_LRH1_Q5_M01142 TRANSFAC - 134654060 134654071 1.0E-05 CTGGCCTTGCAT 12 V_AML2_Q3_01_M01854 TRANSFAC - 134656341 134656351 5.0E-06 CCTCACCATAG 11 V_POU5F1_01_M01307 TRANSFAC + 134654481 134654490 2.0E-06 TATGCAAATA 10 V_OCT2_01_M01368 TRANSFAC + 134654478 134654493 1.0E-06 GAATATGCAAATACCA 16 V_OCT1_Q6_M00195 TRANSFAC + 134654478 134654492 0.0E+00 GAATATGCAAATACC 15 V_CBF_01_M01079 TRANSFAC - 134654485 134654500 9.0E-06 AATTATGTGGTATTTG 16 NR1H2_RXRA_MA0115.1 JASPAR + 134654417 134654433 1.0E-05 TGGGTTCAAACTTCAAC 17 V_TFIIA_Q6_M00707 TRANSFAC - 134654932 134654943 8.0E-06 TCTATGAGGAAC 12 V_FPM315_01_M01587 TRANSFAC + 134655441 134655452 6.0E-06 CGGGGAGGAGCA 12 V_FPM315_01_M01587 TRANSFAC + 134655592 134655603 3.0E-06 GAGGGAGGAGCG 12 V_OSR2_03_M02785 TRANSFAC - 134656057 134656072 1.0E-06 AGTAACAGTAGCTAAG 16 V_VDR_Q6_M00961 TRANSFAC + 134654953 134654964 3.0E-06 CTCTATGAACCA 12 V_ZFP281_01_M01597 TRANSFAC - 134655981 134655991 1.0E-06 TGGGGGTGGGG 11 V_ZFP281_04_M02831 TRANSFAC + 134655111 134655125 4.0E-06 TCGCCCTCCCCCCTC 15 V_HFH3_01_M00289 TRANSFAC - 134654481 134654493 6.0E-06 TGGTATTTGCATA 13 V_EWSR1FLI1_01_M02252 TRANSFAC - 134655114 134655131 6.0E-06 GGAAAGGAGGGGGGAGGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 134655578 134655595 4.0E-06 GAAAGGAGGGAGGGGAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 134655582 134655599 1.0E-06 GGAGGGAGGGGAGGGAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 134655586 134655603 6.0E-06 GGAGGGGAGGGAGGAGCG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 134656223 134656240 2.0E-06 GAAAGAAAGGAAGGGGAG 18 V_SOX18_04_M02905 TRANSFAC - 134654265 134654280 4.0E-06 AGAGTGAATTTGAGCA 16 V_EKLF_Q5_M01874 TRANSFAC - 134655075 134655084 2.0E-06 CCACACCCTG 10 V_MEF2_01_M00006 TRANSFAC - 134655013 134655028 1.0E-06 CTTCAAGAATAACTCC 16 V_AP2ALPHA_02_M01045 TRANSFAC - 134655316 134655330 7.0E-06 ACCGCCTTAGGCGGG 15 V_HMEF2_Q6_M00406 TRANSFAC - 134655013 134655028 8.0E-06 CTTCAAGAATAACTCC 16 V_RXRLXRB_01_M01198 TRANSFAC + 134654419 134654431 5.0E-06 GGTTCAAACTTCA 13 V_AP2ALPHA_03_M01047 TRANSFAC + 134655316 134655330 1.0E-06 CCCGCCTAAGGCGGT 15 V_AP2ALPHA_03_M01047 TRANSFAC - 134655316 134655330 1.0E-06 ACCGCCTTAGGCGGG 15 V_ATATA_B_M00311 TRANSFAC - 134658808 134658817 5.0E-06 GTACTTAAGT 10 V_PAX4_04_M00380 TRANSFAC - 134654138 134654167 7.0E-06 AAATATTTCAGAAGCAGCAAACTTCTTTCC 30 V_RFX1_02_M00281 TRANSFAC - 134656050 134656067 2.0E-06 CAGTAGCTAAGGTAACTG 18 V_RFX1_02_M00281 TRANSFAC - 134656335 134656352 7.0E-06 TCCTCACCATAGGAACAT 18 V_DMRT5_01_M01150 TRANSFAC + 134654008 134654022 4.0E-06 AACTGTAACTGTGTT 15 V_DMRT5_01_M01150 TRANSFAC + 134656063 134656077 0.0E+00 TACTGTTACTGTTTC 15 V_ZIC1_05_M02939 TRANSFAC - 134655861 134655875 7.0E-06 GCTCTCAGCAGGAAG 15 V_OCT4_01_M01125 TRANSFAC + 134654475 134654489 6.0E-06 AATGAATATGCAAAT 15 V_PPARG_01_M00512 TRANSFAC + 134654415 134654435 8.0E-06 CCTGGGTTCAAACTTCAACTC 21

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.