Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

LGI3


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
203190 leucine-rich repeat LGI family, member 3 chr8 -22013844 - 22019344 22014344

Transcription Factor Binding Sites

 
Download all TFBS in the LGI3 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
HSF2_HSF_DBD_trimeric_13_1 SELEX + 22014831 22014843 1.0E-06 TTCTGGAACATTT 13
SRY_HMG_DBD_dimeric_15_1 SELEX + 22017381 22017395 5.0E-06 ATCAATCCCAATGTT 15
HSF1_HSF_full_trimeric_13_1 SELEX + 22014831 22014843 5.0E-06 TTCTGGAACATTT 13
EWSR1-FLI1_MA0149.1 JASPAR + 22019016 22019033 2.0E-06 GCAAGGAAGGCAGGCACG 18
POU1F1_POU_DBD_monomeric_14_1 SELEX + 22016126 22016139 1.0E-06 ATGATGCTAATGAG 14
ZNF238_C2H2_full_monomeric_13_1 SELEX - 22017467 22017479 6.0E-06 GTGCCAGATGTGG 13
POU3F3_POU_DBD_monomeric_13_1 SELEX + 22016126 22016138 4.0E-06 ATGATGCTAATGA 13
GRHL1_CP2_DBD_dimer-of-dimers_17_1 SELEX + 22014721 22014737 1.0E-06 AACCGGATTCACATGTT 17
GRHL1_CP2_DBD_dimer-of-dimers_17_1 SELEX - 22014721 22014737 3.0E-06 AACATGTGAATCCGGTT 17
HSF4_HSF_DBD_trimeric_13_1 SELEX + 22014831 22014843 9.0E-06 TTCTGGAACATTT 13
SOX18_HMG_full_dimeric_15_1 SELEX + 22017381 22017395 5.0E-06 ATCAATCCCAATGTT 15
NR3C2_nuclearreceptor_DBD_dimeric_17_1 SELEX + 22014751 22014767 4.0E-06 CTGAACAGAATGTACCT 17
NR3C2_nuclearreceptor_DBD_dimeric_17_1 SELEX - 22014751 22014767 6.0E-06 AGGTACATTCTGTTCAG 17
ESR1_nuclearreceptor_DBD_dimeric_17_1 SELEX + 22014769 22014785 7.0E-06 TGTGTCAGCATGAGCTG 17
TFAP2C_TFAP_full_dimeric_12_1 SELEX - 22014197 22014208 7.0E-06 CGCCCGAGGGCA 12
Myf_MA0055.1 JASPAR + 22017090 22017101 2.0E-06 AAGCAGCAGCAG 12
Myf_MA0055.1 JASPAR + 22017093 22017104 4.0E-06 CAGCAGCAGCAG 12
TEAD1_TEA_full_dimeric_17_1 SELEX - 22014817 22014833 4.0E-06 GAATTCCACACAGTCCC 17
NR3C1_MA0113.1 JASPAR - 22014750 22014767 4.0E-06 AGGTACATTCTGTTCAGC 18
SRY_HMG_DBD_dimeric_13_1 SELEX + 22017382 22017394 8.0E-06 TCAATCCCAATGT 13
TFAP2A_TFAP_DBD_dimeric_12_1 SELEX + 22014197 22014208 8.0E-06 TGCCCTCGGGCG 12
POU3F2_POU_DBD_monomeric_12_1 SELEX + 22016127 22016138 9.0E-06 TGATGCTAATGA 12
Hic1_C2H2_DBD_dimeric_18_1 SELEX - 22017432 22017449 3.0E-06 GTGCCCACCCCTGCCCTC 18
FOXO6_forkhead_DBD_dimeric_14_1 SELEX + 22014727 22014740 5.0E-06 ATTCACATGTTTTT 14
NR3C1_nuclearreceptor_DBD_dimeric_17_1 SELEX + 22014751 22014767 5.0E-06 CTGAACAGAATGTACCT 17
NR3C1_nuclearreceptor_DBD_dimeric_17_1 SELEX - 22014751 22014767 5.0E-06 AGGTACATTCTGTTCAG 17
Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX + 22014197 22014208 9.0E-06 TGCCCTCGGGCG 12
AR_nuclearreceptor_full_dimeric_17_1 SELEX - 22014751 22014767 7.0E-06 AGGTACATTCTGTTCAG 17
V_NFAT_Q4_01_M00935 TRANSFAC - 22014735 22014744 9.0E-06 GTGGAAAAAC 10
V_KLF15_Q2_M01714 TRANSFAC - 22014220 22014233 7.0E-06 GAGCAGGGGAGGGG 14
V_TGIF_01_M00418 TRANSFAC - 22017117 22017127 1.0E-06 AGCTGTCACAA 11
V_TCFE2A_04_M02927 TRANSFAC + 22019056 22019072 1.0E-06 AAGTGCAGATGGCCCGA 17
V_BACH2_01_M00490 TRANSFAC + 22017368 22017378 5.0E-06 CGTGAGTCAGC 11
V_SOX14_05_M02902 TRANSFAC - 22014762 22014776 7.0E-06 CTGACACAAAGGTAC 15
V_YY1_02_M00069 TRANSFAC - 22019054 22019073 6.0E-06 CTCGGGCCATCTGCACTTCT 20
V_MMEF2_Q6_M00405 TRANSFAC + 22017067 22017082 7.0E-06 GGGTTTAAAAAAAGAA 16
V_AR_Q6_01_M01996 TRANSFAC - 22014751 22014765 7.0E-06 GTACATTCTGTTCAG 15
V_IRF_Q6_01_M00972 TRANSFAC + 22014786 22014796 8.0E-06 AAAAGGGAAAC 11
V_IRF2_Q6_M01882 TRANSFAC + 22014784 22014799 6.0E-06 TGAAAAGGGAAACGCA 16
V_RP58_01_M00532 TRANSFAC + 22017466 22017477 8.0E-06 CCCACATCTGGC 12
V_E2A_Q2_M00804 TRANSFAC + 22014505 22014518 3.0E-06 TCACCTGTCTCTGC 14
V_E2A_Q2_M00804 TRANSFAC + 22017345 22017358 3.0E-06 CCACCTGGCTCAGG 14
V_AP4_Q6_02_M01860 TRANSFAC - 22017481 22017493 8.0E-06 TCAGCTGTGTGCA 13
V_PU1_Q4_M01172 TRANSFAC - 22017073 22017091 3.0E-06 TTCTTCTCCTTCTTTTTTT 19
V_NR3C1_01_M02219 TRANSFAC - 22014750 22014767 4.0E-06 AGGTACATTCTGTTCAGC 18
V_TCFAP2C_04_M02925 TRANSFAC - 22014196 22014209 4.0E-06 GCGCCCGAGGGCAG 14
V_TCFAP2C_04_M02925 TRANSFAC + 22017129 22017142 1.0E-06 CAGCCTAAGGGCAA 14
V_TGIF2_01_M01407 TRANSFAC - 22017116 22017131 8.0E-06 CTGTAGCTGTCACAAG 16
V_MYF_01_M01302 TRANSFAC + 22017090 22017101 2.0E-06 AAGCAGCAGCAG 12
V_MYF_01_M01302 TRANSFAC + 22017093 22017104 4.0E-06 CAGCAGCAGCAG 12
V_IRF2_01_M00063 TRANSFAC + 22014785 22014797 3.0E-06 GAAAAGGGAAACG 13
V_ZBP89_Q4_M01816 TRANSFAC - 22017427 22017436 4.0E-06 CCCTCCCCCA 10
V_CEBPB_02_M00117 TRANSFAC + 22019078 22019091 9.0E-06 AGTTTGCTCAACTC 14
V_IRF3_Q3_M01279 TRANSFAC - 22014787 22014799 1.0E-06 TGCGTTTCCCTTT 13
V_AR_04_M01201 TRANSFAC - 22014752 22014766 5.0E-06 GGTACATTCTGTTCA 15
V_GR_Q6_M00192 TRANSFAC - 22014750 22014768 3.0E-06 AAGGTACATTCTGTTCAGC 19
V_MEF2_Q6_01_M00941 TRANSFAC - 22017071 22017082 9.0E-06 TTCTTTTTTTAA 12
V_STAF_02_M00264 TRANSFAC - 22014821 22014841 3.0E-06 ATGTTCCAGAATTCCACACAG 21
V_BLIMP1_Q6_M01066 TRANSFAC + 22014784 22014799 6.0E-06 TGAAAAGGGAAACGCA 16
V_POU6F1_02_M01462 TRANSFAC + 22016128 22016144 5.0E-06 GATGCTAATGAGGATGA 17
V_TCFAP2B_03_M02820 TRANSFAC - 22014196 22014209 9.0E-06 GCGCCCGAGGGCAG 14
V_TCFAP2B_03_M02820 TRANSFAC + 22019065 22019078 7.0E-06 TGGCCCGAGGGCAA 14
V_PLZF_02_M01075 TRANSFAC - 22017057 22017085 7.0E-06 TCCTTCTTTTTTTAAACCCATTTTTGCTT 29
V_DMRT2_01_M01147 TRANSFAC + 22014756 22014771 1.0E-05 CAGAATGTACCTTTGT 16
V_SRF_06_M02916 TRANSFAC + 22017069 22017085 3.0E-06 GTTTAAAAAAAGAAGGA 17
V_HSF2_02_M01244 TRANSFAC - 22014831 22014843 7.0E-06 AAATGTTCCAGAA 13
V_POU6F1_03_M01479 TRANSFAC + 22016128 22016144 3.0E-06 GATGCTAATGAGGATGA 17
V_EWSR1FLI1_01_M02252 TRANSFAC + 22019016 22019033 2.0E-06 GCAAGGAAGGCAGGCACG 18
V_AR_01_M00481 TRANSFAC - 22014752 22014766 5.0E-06 GGTACATTCTGTTCA 15
V_AR_Q2_M00447 TRANSFAC - 22014752 22014766 2.0E-06 GGTACATTCTGTTCA 15
V_NANOG_02_M01247 TRANSFAC + 22017071 22017090 8.0E-06 TTAAAAAAAGAAGGAGAAGA 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL