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RDM1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
201299 RAD52 motif 1 chr17 -34256803 - 34262780 34257303

Transcription Factor Binding Sites

 
Download all TFBS in the RDM1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
SPIC_ETS_full_monomeric_14_1 SELEX - 34259194 34259207 9.0E-06 CAAAAAGGAAAGTA 14
PKNOX1_MEIS_DBD_dimeric_12_1 SELEX - 34259343 34259354 6.0E-06 CGACAGCTGTCT 12
EWSR1-FLI1_MA0149.1 JASPAR - 34257600 34257617 9.0E-06 GGAGGGAGGGATGGAGAA 18
EWSR1-FLI1_MA0149.1 JASPAR - 34257604 34257621 6.0E-06 GGATGGAGGGAGGGATGG 18
TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 34259343 34259354 8.0E-06 AGACAGCTGTCG 12
TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 34259343 34259354 9.0E-06 CGACAGCTGTCT 12
SP1_MA0079.2 JASPAR + 34257891 34257900 9.0E-06 CCCCTCCTCC 10
Tcf21_bHLH_DBD_dimeric_14_1 SELEX + 34259342 34259355 6.0E-06 AAGACAGCTGTCGG 14
Tcf21_bHLH_DBD_dimeric_14_1 SELEX - 34259342 34259355 8.0E-06 CCGACAGCTGTCTT 14
TEAD3_TEA_DBD_dimeric_17_1 SELEX + 34259781 34259797 4.0E-06 AAATTCCTCTCATAGTT 17
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 34259193 34259207 5.0E-06 CAAAAAGGAAAGTAG 15
NRF1_NRF_full_dimeric_12_1 SELEX + 34257775 34257786 5.0E-06 TGCGCCTGCGCA 12
NRF1_NRF_full_dimeric_12_1 SELEX - 34257775 34257786 5.0E-06 TGCGCAGGCGCA 12
TGIF1_MEIS_DBD_dimeric_12_1 SELEX + 34259343 34259354 9.0E-06 AGACAGCTGTCG 12
RORA_2_MA0072.1 JASPAR - 34261925 34261938 4.0E-06 AAGAACTGGGTCAT 14
V_NF1_Q6_01_M00806 TRANSFAC + 34259315 34259331 5.0E-06 AAGGCTCCTTGCCAAGC 17
V_NF1A_Q6_M02103 TRANSFAC + 34259315 34259330 8.0E-06 AAGGCTCCTTGCCAAG 16
V_BCL6_01_M01183 TRANSFAC - 34259766 34259781 5.0E-06 TTTGCTGCTTAACTTT 16
V_MMEF2_Q6_M00405 TRANSFAC - 34257797 34257812 2.0E-06 CTTTTTAAAAAAGCGC 16
V_DR4_Q2_M00965 TRANSFAC + 34262001 34262017 2.0E-06 TGTCCTCCACTGTCCCC 17
V_IRF2_Q6_M01882 TRANSFAC - 34259193 34259208 8.0E-06 CCAAAAAGGAAAGTAG 16
V_P53_DECAMER_Q2_M00761 TRANSFAC + 34258986 34258995 9.0E-06 AGACATGCCC 10
V_IRF3_05_M02767 TRANSFAC - 34259194 34259207 3.0E-06 CAAAAAGGAAAGTA 14
V_SP1_03_M02281 TRANSFAC + 34257891 34257900 9.0E-06 CCCCTCCTCC 10
V_NKX24_01_M01350 TRANSFAC + 34257389 34257404 8.0E-06 TTTTCCTCTTAAAATC 16
V_CMYB_Q5_M01821 TRANSFAC - 34259855 34259865 8.0E-06 CCTAACTGATT 11
V_SP1_02_M01303 TRANSFAC + 34257825 34257835 8.0E-06 GGGGCGGGGAC 11
V_NFAT2_01_M01748 TRANSFAC + 34259008 34259016 3.0E-06 ATGGAAAAA 9
V_CDP_04_M01344 TRANSFAC - 34259227 34259241 4.0E-06 AAGTGATGATTCATA 15
V_PAX_Q6_M00808 TRANSFAC - 34259174 34259184 0.0E+00 CTGGAACTCAC 11
V_E2_Q6_M00181 TRANSFAC + 34257704 34257719 8.0E-06 GAACCGCAAAAGGTAC 16
V_ELF4_04_M02850 TRANSFAC - 34258101 34258117 1.0E-06 ACTCTTAAAAAAACCTC 17
V_NFKB_Q6_M00194 TRANSFAC - 34257953 34257966 9.0E-06 TTGGGACTTTACCC 14
V_MAZ_Q6_01_M02023 TRANSFAC - 34257603 34257616 9.0E-06 GAGGGAGGGATGGA 14
V_OCT1_05_M00161 TRANSFAC - 34257633 34257646 5.0E-06 AGGCTTTGCATGTG 14
V_IRF_Q6_M00772 TRANSFAC + 34259192 34259206 1.0E-06 TCTACTTTCCTTTTT 15
V_NKX22_02_M01372 TRANSFAC - 34258105 34258121 1.0E-05 TTAAACTCTTAAAAAAA 17
V_MEF2_03_M00232 TRANSFAC + 34258110 34258131 8.0E-06 TTAAGAGTTTAAAATTGCAAAT 22
V_CUX1_04_M02959 TRANSFAC - 34259227 34259241 4.0E-06 AAGTGATGATTCATA 15
V_OCAB_Q6_M02113 TRANSFAC + 34257634 34257644 7.0E-06 ACATGCAAAGC 11
V_MEF2_Q6_01_M00941 TRANSFAC + 34258103 34258114 6.0E-06 GGTTTTTTTAAG 12
V_MZF1_02_M00084 TRANSFAC - 34257854 34257866 8.0E-06 GTAGGAGGGGCAA 13
V_MYOD_Q6_02_M02100 TRANSFAC - 34259343 34259351 8.0E-06 CAGCTGTCT 9
V_RARA_04_M02891 TRANSFAC - 34261922 34261937 4.0E-06 AGAACTGGGTCATGTG 16
V_E2_01_M00107 TRANSFAC + 34257704 34257719 4.0E-06 GAACCGCAAAAGGTAC 16
V_ZFP206_01_M01742 TRANSFAC - 34257776 34257786 1.0E-06 TGCGCAGGCGC 11
V_E2_Q6_01_M00928 TRANSFAC - 34257705 34257720 8.0E-06 GGTACCTTTTGCGGTT 16
V_T3RBETA_Q6_01_M02119 TRANSFAC - 34262000 34262016 1.0E-06 GGGACAGTGGAGGACAG 17
V_ZFP281_01_M01597 TRANSFAC - 34257891 34257901 7.0E-06 TGGAGGAGGGG 11
V_PUR1_Q4_M01721 TRANSFAC - 34262008 34262016 6.0E-06 GGGACAGTG 9
V_EWSR1FLI1_01_M02252 TRANSFAC - 34257600 34257617 9.0E-06 GGAGGGAGGGATGGAGAA 18
V_EWSR1FLI1_01_M02252 TRANSFAC - 34257604 34257621 6.0E-06 GGATGGAGGGAGGGATGG 18
V_MEF2_01_M00006 TRANSFAC - 34258101 34258116 2.0E-06 CTCTTAAAAAAACCTC 16
V_SP1_Q2_01_M00933 TRANSFAC - 34257824 34257833 7.0E-06 CCCCGCCCCT 10
V_PAX4_04_M00380 TRANSFAC + 34261876 34261905 2.0E-06 AGAAAAAAGACATGGTTCTTGCCTCACACT 30
V_RORA2_01_M00157 TRANSFAC - 34261925 34261937 4.0E-06 AGAACTGGGTCAT 13
V_NF1_Q6_M00193 TRANSFAC - 34259314 34259331 3.0E-06 GCTTGGCAAGGAGCCTTG 18
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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