Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ELK1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 2002 ELK1, member of ETS oncogene family chrX - 47509503 - 47515003 47510003 ELK1_MA0028.1 ELK1_ETS_full_dimeric_17_1 ELK1_ETS_full_monomeric_10_1 V_ELK1_05_M01981 V_ELK1_04_M01165 V_ELK1_02_M00025 V_ELK1_03_M01163 V_ELK1_06_M02059 V_ELK1_01_M00007 Transcription Factor Binding Sites   Download all TFBS in the ELK1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 47509580 47509592 7.0E-06 AAAAACATAAGCA 13 ZNF306_C2H2_full_monomeric_14_1 SELEX - 47508016 47508029 9.0E-06 TGGGCCAGCCTCAG 14 SPIC_ETS_full_monomeric_14_1 SELEX + 47510655 47510668 5.0E-06 AAAAAGGGGAGGAA 14 KLF14_C2H2_DBD_monomeric_14_1 SELEX - 47510440 47510453 2.0E-06 TGCTACGCCCATTT 14 CEBPD_bZIP_DBD_dimeric_10_1 SELEX + 47505187 47505196 8.0E-06 ATTACACAAT 10 FOXL1_forkhead_full_dimeric_13_1 SELEX + 47507205 47507217 5.0E-06 AGACAACAAACAA 13 FOXD1_MA0031.1 JASPAR + 47507912 47507919 7.0E-06 GTAAACAT 8 TBP_MA0108.2 JASPAR - 47507874 47507888 4.0E-06 GTATAAAAAGATACA 15 HLF_bZIP_full_dimeric_12_1 SELEX + 47505186 47505197 7.0E-06 AATTACACAATC 12 EWSR1-FLI1_MA0149.1 JASPAR + 47510559 47510576 1.0E-06 GGTAGGAGGGCAGGATGG 18 NFYA_MA0060.1 JASPAR - 47510029 47510044 1.0E-06 TTTGGCCAATCAGCGA 16 NFYA_MA0060.1 JASPAR - 47510192 47510207 2.0E-06 TTGAGCCAATCGGCGT 16 NFYA_MA0060.1 JASPAR - 47510342 47510357 3.0E-06 GTCCGCCAATCAGAGA 16 KLF13_C2H2_full_monomeric_18_1 SELEX - 47510437 47510454 1.0E-06 CTGCTACGCCCATTTCTA 18 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX + 47509624 47509641 3.0E-06 GAGGTTAGGCCACGGTCA 18 CEBPB_bZIP_full_dimeric_10_1 SELEX + 47505187 47505196 7.0E-06 ATTACACAAT 10 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 47507206 47507216 7.0E-06 GACAACAAACA 11 SP1_MA0079.2 JASPAR - 47510255 47510264 7.0E-06 CCCCGCCCCC 10 NFIL3_bZIP_DBD_dimeric_12_1 SELEX + 47505186 47505197 6.0E-06 AATTACACAATC 12 Stat3_MA0144.1 JASPAR + 47505204 47505213 1.0E-06 TTCCAGGAAG 10 Evi1_MA0029.1 JASPAR + 47510511 47510524 5.0E-06 TAGACAAGACCATA 14 Tp53_p53l_DBD_dimeric_17_1 SELEX + 47507860 47507876 6.0E-06 ACATCTTTCATACATGT 17 CEBPE_bZIP_DBD_dimeric_10_1 SELEX + 47505187 47505196 6.0E-06 ATTACACAAT 10 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 47509580 47509592 2.0E-06 AAAAACATAAGCA 13 E2F2_E2F_DBD_dimeric_18_1 SELEX + 47505235 47505252 7.0E-06 ATCAAAGGTGCCAAATAA 18 NFIA_NFI_full_monomeric_10_1 SELEX + 47505241 47505250 9.0E-06 GGTGCCAAAT 10 V_STAT5A_Q6_M01890 TRANSFAC - 47507851 47507863 1.0E-06 ATGTTTCTAAGAA 13 V_BTEB3_Q5_M01865 TRANSFAC - 47505162 47505174 1.0E-05 GTGAGGGAAGAGC 13 V_BCL6B_03_M02740 TRANSFAC - 47507847 47507862 6.0E-06 TGTTTCTAAGAATGCC 16 V_NF1_Q6_01_M00806 TRANSFAC + 47510367 47510383 4.0E-06 CTAGACCCCTGCCAAAA 17 V_NFY_Q6_M00185 TRANSFAC - 47510032 47510042 7.0E-06 TGGCCAATCAG 11 V_MMEF2_Q6_M00405 TRANSFAC - 47507832 47507847 1.0E-05 CAGTTTATATATGAGT 16 V_SPDEF_04_M02915 TRANSFAC + 47507799 47507814 5.0E-06 GAACACATCCTTTTGA 16 V_ZTA_Q2_M00711 TRANSFAC + 47507824 47507836 6.0E-06 AAACCCTTACTCA 13 V_EVI1_02_M00079 TRANSFAC + 47510512 47510522 6.0E-06 AGACAAGACCA 11 V_AP2_Q6_01_M00915 TRANSFAC + 47509895 47509907 1.0E-06 CGCCCCCCAGGCC 13 V_SP1_03_M02281 TRANSFAC - 47510255 47510264 7.0E-06 CCCCGCCCCC 10 V_SPZ1_01_M00446 TRANSFAC + 47508843 47508857 8.0E-06 ACGGGAGGGTATGCG 15 V_SP1_02_M01303 TRANSFAC + 47509867 47509877 8.0E-06 GGGGCGGGGGC 11 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 47509612 47509627 1.0E-05 CAACGGGAGGGGGAGG 16 V_PU1_Q4_M01172 TRANSFAC - 47510120 47510138 6.0E-06 TTCCATCATTTCCCCTTAC 19 V_NFY_Q6_01_M00775 TRANSFAC - 47510033 47510045 2.0E-06 CTTTGGCCAATCA 13 V_CDX_Q5_M00991 TRANSFAC - 47507870 47507887 1.0E-06 TATAAAAAGATACATGTA 18 V_LXRB_RXRA_Q5_M02021 TRANSFAC + 47509777 47509791 8.0E-06 TGGGGTCACGGACTG 15 V_NFY_C_M00209 TRANSFAC + 47510031 47510044 2.0E-06 GCTGATTGGCCAAA 14 V_NFY_C_M00209 TRANSFAC + 47510276 47510289 9.0E-06 ACTGATTGGCTTAC 14 V_ZNF219_01_M01122 TRANSFAC - 47510250 47510261 8.0E-06 CGCCCCCCCGAC 12 V_ZFP105_03_M02827 TRANSFAC + 47507206 47507220 9.0E-06 GACAACAAACAAGTA 15 V_TATA_01_M00252 TRANSFAC - 47507874 47507888 4.0E-06 GTATAAAAAGATACA 15 V_SP4_03_M02810 TRANSFAC - 47510385 47510401 3.0E-06 GACACCGCCCCCTTGGT 17 V_KROX_Q6_M00982 TRANSFAC - 47509754 47509767 5.0E-06 CCCGCCCCCGCGCA 14 V_ZBP89_Q4_M01816 TRANSFAC - 47508884 47508893 2.0E-06 TCCTCCCCCA 10 V_IRX4_01_M01410 TRANSFAC - 47507865 47507881 1.0E-06 AAGATACATGTATGAAA 17 V_IRX4_01_M01410 TRANSFAC + 47507866 47507882 8.0E-06 TTCATACATGTATCTTT 17 V_SP1_Q6_M00196 TRANSFAC + 47509865 47509877 4.0E-06 GGGGGGCGGGGGC 13 V_SP1_Q6_M00196 TRANSFAC + 47510254 47510266 4.0E-06 GGGGGGCGGGGGT 13 V_MAZ_Q6_01_M02023 TRANSFAC + 47508086 47508099 1.0E-05 GGGGGTGGGAAGGT 14 V_MAZ_Q6_01_M02023 TRANSFAC + 47509759 47509772 5.0E-06 GGGGGCGGGAAGGA 14 V_EGR1_Q6_M01873 TRANSFAC + 47509757 47509766 4.0E-06 GCGGGGGCGG 10 V_PBX1_05_M01967 TRANSFAC + 47510680 47510693 4.0E-06 ATTGATTGGCGGTG 14 V_TAXCREB_02_M00115 TRANSFAC - 47510261 47510275 5.0E-06 GTGAGGCAGACCCCC 15 V_STAT4_Q5_M02117 TRANSFAC + 47507851 47507860 9.0E-06 TTCTTAGAAA 10 V_IRX3_01_M01318 TRANSFAC - 47507865 47507881 0.0E+00 AAGATACATGTATGAAA 17 V_IRX3_01_M01318 TRANSFAC + 47507866 47507882 2.0E-06 TTCATACATGTATCTTT 17 V_ISGF4G_04_M02875 TRANSFAC + 47509579 47509592 9.0E-06 GAAAAACATAAGCA 14 V_IRX5_01_M01472 TRANSFAC - 47507865 47507881 0.0E+00 AAGATACATGTATGAAA 17 V_IRX5_01_M01472 TRANSFAC + 47507866 47507882 1.0E-06 TTCATACATGTATCTTT 17 V_GR_Q6_02_M01836 TRANSFAC + 47505268 47505280 6.0E-06 AAATCTGTTCTTC 13 V_GLI3_01_M01596 TRANSFAC + 47510325 47510335 7.0E-06 GTGGGTGGCCC 11 V_SP4_Q5_M01273 TRANSFAC - 47509866 47509876 5.0E-06 CCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC - 47510255 47510265 5.0E-06 CCCCCGCCCCC 11 V_ELF1_Q6_M00746 TRANSFAC + 47507815 47507826 8.0E-06 AAAGGAGGAAAA 12 V_ELF1_Q6_M00746 TRANSFAC + 47510120 47510131 5.0E-06 GTAAGGGGAAAT 12 V_IRX3_02_M01485 TRANSFAC - 47507865 47507881 1.0E-06 AAGATACATGTATGAAA 17 V_IRX3_02_M01485 TRANSFAC + 47507866 47507882 3.0E-06 TTCATACATGTATCTTT 17 V_CAAT_01_M00254 TRANSFAC - 47510033 47510044 1.0E-06 TTTGGCCAATCA 12 V_ALPHACP1_01_M00687 TRANSFAC - 47510277 47510287 3.0E-06 AAGCCAATCAG 11 V_ALPHACP1_01_M00687 TRANSFAC - 47510345 47510355 4.0E-06 CCGCCAATCAG 11 V_AP3_Q6_M00690 TRANSFAC - 47510541 47510548 5.0E-06 TCTAAATT 8 V_NFYC_Q5_M02107 TRANSFAC - 47510029 47510042 3.0E-06 TGGCCAATCAGCGA 14 V_NFYC_Q5_M02107 TRANSFAC - 47510192 47510205 5.0E-06 GAGCCAATCGGCGT 14 V_NFYC_Q5_M02107 TRANSFAC - 47510274 47510287 1.0E-06 AAGCCAATCAGTGT 14 V_CEBPA_01_M00116 TRANSFAC + 47505185 47505198 4.0E-06 CAATTACACAATCA 14 V_NCX_01_M00484 TRANSFAC - 47508821 47508830 1.0E-05 TTGTAATTGG 10 V_NFY_01_M00287 TRANSFAC - 47510029 47510044 2.0E-06 TTTGGCCAATCAGCGA 16 V_NFY_01_M00287 TRANSFAC - 47510192 47510207 5.0E-06 TTGAGCCAATCGGCGT 16 V_NFY_01_M00287 TRANSFAC - 47510274 47510289 7.0E-06 GTAAGCCAATCAGTGT 16 V_NFY_01_M00287 TRANSFAC - 47510342 47510357 3.0E-06 GTCCGCCAATCAGAGA 16 V_FPM315_01_M01587 TRANSFAC + 47510000 47510011 7.0E-06 CGAGGAGGAGGA 12 V_R_01_M00273 TRANSFAC + 47509684 47509704 3.0E-06 AGGTCCACCAGCCGTGGTGGT 21 V_EGR1_06_M02744 TRANSFAC - 47509754 47509767 6.0E-06 CCCGCCCCCGCGCA 14 V_IRX2_01_M01405 TRANSFAC - 47507865 47507881 0.0E+00 AAGATACATGTATGAAA 17 V_IRX2_01_M01405 TRANSFAC + 47507866 47507882 0.0E+00 TTCATACATGTATCTTT 17 V_LEF1TCF1_Q4_M00978 TRANSFAC - 47505232 47505242 1.0E-05 CCTTTGATCAC 11 V_PBX_Q3_M00998 TRANSFAC + 47510294 47510305 2.0E-06 GATTGATGGAAG 12 V_EWSR1FLI1_01_M02252 TRANSFAC + 47510559 47510576 1.0E-06 GGTAGGAGGGCAGGATGG 18 V_FOXJ2_01_M00422 TRANSFAC + 47507204 47507221 6.0E-06 CAGACAACAAACAAGTAA 18 V_SMAD3_Q6_M00701 TRANSFAC - 47507201 47507209 3.0E-06 TGTCTGTCT 9 V_HLF_01_M00260 TRANSFAC + 47505187 47505196 3.0E-06 ATTACACAAT 10 V_PR_02_M00957 TRANSFAC - 47507989 47508015 4.0E-06 GGCCTTTGCATTGGCTGTTCTTTGTGC 27 V_PIT1_Q6_M00802 TRANSFAC + 47507864 47507881 4.0E-06 CTTTCATACATGTATCTT 18 V_SP1_Q2_01_M00933 TRANSFAC - 47509866 47509875 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC - 47510255 47510264 4.0E-06 CCCCGCCCCC 10 V_UF1H3BETA_Q6_M01068 TRANSFAC + 47510076 47510089 2.0E-06 GTTGGGGGACGGGC 14 V_CEBP_Q2_01_M00912 TRANSFAC + 47505187 47505198 1.0E-06 ATTACACAATCA 12 V_NFYA_Q5_M02106 TRANSFAC - 47510029 47510042 2.0E-06 TGGCCAATCAGCGA 14 V_NFYA_Q5_M02106 TRANSFAC - 47510342 47510355 2.0E-06 CCGCCAATCAGAGA 14 V_SP1_Q4_01_M00932 TRANSFAC + 47509865 47509877 8.0E-06 GGGGGGCGGGGGC 13 V_IRXB3_01_M01377 TRANSFAC - 47507865 47507881 1.0E-06 AAGATACATGTATGAAA 17 V_IRXB3_01_M01377 TRANSFAC + 47507866 47507882 1.0E-06 TTCATACATGTATCTTT 17 V_CEBPE_01_M01772 TRANSFAC + 47505187 47505196 7.0E-06 ATTACACAAT 10 V_CEBPE_01_M01772 TRANSFAC - 47505187 47505196 4.0E-06 ATTGTGTAAT 10 V_BRF1_01_M01747 TRANSFAC - 47509712 47509724 9.0E-06 GTGTTCGACTCCC 13 V_CEBPG_Q6_01_M01869 TRANSFAC + 47505186 47505197 8.0E-06 AATTACACAATC 12 V_NF1_Q6_M00193 TRANSFAC - 47510366 47510383 4.0E-06 TTTTGGCAGGGGTCTAGA 18 V_CEBPA_Q6_M01866 TRANSFAC - 47505186 47505198 4.0E-06 TGATTGTGTAATT 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.