Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ELAVL4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 1996 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 chr1 + 50508685 - 50514185 50513685 Transcription Factor Binding Sites   Download all TFBS in the ELAVL4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NEUROD2_bHLH_full_dimeric_10_1 SELEX + 50514668 50514677 3.0E-06 AACATATGTT 10 NEUROD2_bHLH_full_dimeric_10_1 SELEX - 50514668 50514677 3.0E-06 AACATATGTT 10 RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 50514607 50514622 9.0E-06 CAGGTTCAAGACTTCA 16 HINFP1_C2H2_full_dimeric_20_1 SELEX - 50513761 50513780 3.0E-06 GCGGGCGGGAAGACGTCCGC 20 Klf4_MA0039.2 JASPAR - 50513789 50513798 5.0E-06 TGGGTGGGGC 10 BHLHE23_bHLH_DBD_dimeric_10_1 SELEX + 50514668 50514677 0.0E+00 AACATATGTT 10 BHLHE23_bHLH_DBD_dimeric_10_1 SELEX - 50514668 50514677 0.0E+00 AACATATGTT 10 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX + 50514667 50514678 1.0E-06 CAACATATGTTA 12 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX - 50514667 50514678 1.0E-06 TAACATATGTTG 12 SP1_MA0079.2 JASPAR + 50514658 50514667 3.0E-06 CCCCTCCCCC 10 OLIG1_bHLH_DBD_dimeric_10_1 SELEX + 50514668 50514677 0.0E+00 AACATATGTT 10 OLIG1_bHLH_DBD_dimeric_10_1 SELEX - 50514668 50514677 0.0E+00 AACATATGTT 10 BCL6B_C2H2_DBD_monomeric_17_1 SELEX - 50514714 50514730 5.0E-06 TGTTTTCTAGAAGTCCC 17 CTCF_C2H2_full_monomeric_17_1 SELEX + 50513674 50513690 6.0E-06 AGCGCCCCCTCGAGGTG 17 Mycn_MA0104.2 JASPAR - 50513923 50513932 3.0E-06 ACCACGTGGC 10 Atoh1_bHLH_DBD_dimeric_10_1 SELEX + 50514668 50514677 0.0E+00 AACATATGTT 10 Atoh1_bHLH_DBD_dimeric_10_1 SELEX - 50514668 50514677 0.0E+00 AACATATGTT 10 NEUROG2_bHLH_full_dimeric_10_1 SELEX + 50514668 50514677 1.0E-06 AACATATGTT 10 NEUROG2_bHLH_full_dimeric_10_1 SELEX - 50514668 50514677 1.0E-06 AACATATGTT 10 BHLHA15_bHLH_DBD_dimeric_10_1 SELEX + 50514668 50514677 2.0E-06 AACATATGTT 10 BHLHA15_bHLH_DBD_dimeric_10_1 SELEX - 50514668 50514677 2.0E-06 AACATATGTT 10 OLIG2_bHLH_full_dimeric_10_1 SELEX + 50514668 50514677 1.0E-06 AACATATGTT 10 OLIG2_bHLH_full_dimeric_10_1 SELEX - 50514668 50514677 1.0E-06 AACATATGTT 10 OLIG3_bHLH_DBD_dimeric_10_1 SELEX + 50514668 50514677 1.0E-06 AACATATGTT 10 OLIG3_bHLH_DBD_dimeric_10_1 SELEX - 50514668 50514677 1.0E-06 AACATATGTT 10 V_BCL6_Q3_01_M02085 TRANSFAC - 50514719 50514728 2.0E-06 TTTTCTAGAA 10 TAL1_TCF3_MA0091.1 JASPAR + 50514666 50514677 2.0E-06 CCAACATATGTT 12 TAL1_TCF3_MA0091.1 JASPAR - 50514668 50514679 5.0E-06 TTAACATATGTT 12 V_ZFX_01_M01593 TRANSFAC + 50513869 50513884 9.0E-06 GCGCAGGCCCCGCACC 16 V_SOX11_04_M02899 TRANSFAC - 50514722 50514735 9.0E-06 GGAATTGTTTTCTA 14 V_SP1_03_M02281 TRANSFAC + 50514658 50514667 3.0E-06 CCCCTCCCCC 10 V_GKLF_02_M01588 TRANSFAC + 50513789 50513800 2.0E-06 GCCCCACCCAGC 12 V_CMYC_02_M01154 TRANSFAC + 50513922 50513933 2.0E-06 GGCCACGTGGTC 12 V_CMYC_02_M01154 TRANSFAC - 50513922 50513933 1.0E-06 GACCACGTGGCC 12 V_RPC155_01_M01798 TRANSFAC - 50514602 50514617 3.0E-06 TCAAGACTTCAAGACC 16 V_MYCMAX_01_M00118 TRANSFAC + 50513921 50513934 4.0E-06 GGGCCACGTGGTCG 14 V_MYCMAX_01_M00118 TRANSFAC - 50513921 50513934 4.0E-06 CGACCACGTGGCCC 14 V_CMYC_01_M01145 TRANSFAC + 50513922 50513933 5.0E-06 GGCCACGTGGTC 12 V_CMYC_01_M01145 TRANSFAC - 50513922 50513933 5.0E-06 GACCACGTGGCC 12 V_ZBP89_Q4_M01816 TRANSFAC + 50514659 50514668 4.0E-06 CCCTCCCCCA 10 MYC_MAX_MA0059.1 JASPAR + 50513922 50513932 6.0E-06 GGCCACGTGGT 11 MYC_MAX_MA0059.1 JASPAR - 50513923 50513933 4.0E-06 GACCACGTGGC 11 V_MAZ_Q6_01_M02023 TRANSFAC + 50513980 50513993 9.0E-06 GGAGGGGGAGAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 50514654 50514667 1.0E-06 GGGGGAGGGGAGGT 14 V_SOX18_03_M02801 TRANSFAC - 50514721 50514736 9.0E-06 TGGAATTGTTTTCTAG 16 V_MYCN_01_M02259 TRANSFAC - 50513923 50513932 3.0E-06 ACCACGTGGC 10 V_CTCF_01_M01200 TRANSFAC - 50513673 50513692 8.0E-06 CCCACCTCGAGGGGGCGCTT 20 V_USF_Q6_01_M00796 TRANSFAC - 50513922 50513933 9.0E-06 GACCACGTGGCC 12 V_AP4_01_M00005 TRANSFAC - 50513909 50513926 5.0E-06 TGGCCCAGCGGGTGTCCG 18 V_PADS_C_M00211 TRANSFAC - 50514690 50514698 4.0E-06 TGTGGTCTC 9 V_ZFP281_01_M01597 TRANSFAC - 50514658 50514668 1.0E-06 TGGGGGAGGGG 11 V_ZFP281_04_M02831 TRANSFAC + 50514656 50514670 5.0E-06 CTCCCCTCCCCCAAC 15 V_UF1H3BETA_Q6_M01068 TRANSFAC - 50514657 50514670 0.0E+00 GTTGGGGGAGGGGA 14 V_TAACC_B_M00331 TRANSFAC + 50514690 50514712 1.0E-06 GAGACCACAGGGAAACCGAAGGG 23

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.