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EFNB3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 1949 ephrin-B3 chr17 + 7603519 - 7609019 7608519 Transcription Factor Binding Sites   Download all TFBS in the EFNB3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TBX20_TBX_full_monomeric_11_1 SELEX + 7606984 7606994 9.0E-06 TTGGTGTGAAG 11 SP3_C2H2_DBD_monomeric_11_1 SELEX - 7608397 7608407 4.0E-06 CCCACGCCCCC 11 TBX1_TBX_DBD_dimeric_20_2 SELEX - 7608049 7608068 3.0E-06 GTCACGACTACCTGTGTGAA 20 SOX10_HMG_full_dimeric_16_1 SELEX - 7607200 7607215 1.0E-06 AACAGTGTGGAGTGTG 16 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 7608397 7608407 6.0E-06 CCCACGCCCCC 11 SOX9_HMG_full_dimeric_16_1 SELEX - 7607200 7607215 5.0E-06 AACAGTGTGGAGTGTG 16 HSF1_HSF_full_trimeric_13_1 SELEX - 7608240 7608252 8.0E-06 TGCTGGAATCTTC 13 RFX4_RFX_DBD_dimeric_16_1 SELEX + 7610960 7610975 0.0E+00 TGTTGCCATGGCAACG 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 7610960 7610975 0.0E+00 CGTTGCCATGGCAACA 16 KLF14_C2H2_DBD_monomeric_14_1 SELEX - 7608322 7608335 0.0E+00 TGTCACGCCCCCTT 14 SOX8_HMG_DBD_dimeric_16_1 SELEX - 7607200 7607215 2.0E-06 AACAGTGTGGAGTGTG 16 GRHL1_CP2_full_dimeric_12_1 SELEX - 7607066 7607077 8.0E-06 CAAACAGGTTTC 12 RARG_nuclearreceptor_full_dimeric_17_1 SELEX + 7609272 7609288 5.0E-06 AAGGAGAAGAAAGTTCA 17 Esrrb_MA0141.1 JASPAR - 7607967 7607978 2.0E-06 TGCCCAAGGTCA 12 KLF13_C2H2_full_monomeric_18_1 SELEX - 7608319 7608336 1.0E-06 CTGTCACGCCCCCTTTGT 18 RFX2_RFX_DBD_dimeric_15_1 SELEX + 7607035 7607049 0.0E+00 GGTTGCTAGGCAACT 15 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 7610960 7610975 0.0E+00 TGTTGCCATGGCAACG 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 7610960 7610975 0.0E+00 CGTTGCCATGGCAACA 16 ESR1_MA0112.2 JASPAR - 7607107 7607126 3.0E-06 AGCCCCGCTCACCCTGACCC 20 HSF4_HSF_DBD_trimeric_13_1 SELEX - 7608240 7608252 6.0E-06 TGCTGGAATCTTC 13 RFX3_RFX_DBD_dimeric_15_1 SELEX + 7607035 7607049 0.0E+00 GGTTGCTAGGCAACT 15 YY2_C2H2_full_monomeric_11_1 SELEX - 7610994 7611004 7.0E-06 ACCGCCATCTC 11 SOX7_HMG_full_dimeric_16_1 SELEX - 7607200 7607215 2.0E-06 AACAGTGTGGAGTGTG 16 RFX2_RFX_DBD_dimeric_16_1 SELEX + 7610960 7610975 0.0E+00 TGTTGCCATGGCAACG 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 7610960 7610975 0.0E+00 CGTTGCCATGGCAACA 16 RFX4_RFX_DBD_dimeric_15_1 SELEX + 7607035 7607049 0.0E+00 GGTTGCTAGGCAACT 15 TBX20_TBX_full_dimeric_16_1 SELEX + 7607151 7607166 0.0E+00 GGGTGTGACCGTGTGA 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 7610960 7610975 0.0E+00 TGTTGCCATGGCAACG 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 7610960 7610975 0.0E+00 CGTTGCCATGGCAACA 16 SOX21_HMG_DBD_dimeric_16_1 SELEX - 7607200 7607215 7.0E-06 AACAGTGTGGAGTGTG 16 Tp53_p53l_DBD_dimeric_17_1 SELEX - 7607017 7607033 9.0E-06 ACCAGTCAATGGCATGA 17 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX - 7607965 7607975 6.0E-06 CCAAGGTCACA 11 GRHL1_CP2_DBD_dimeric_10_1 SELEX + 7607067 7607076 7.0E-06 AAACCTGTTT 10 GRHL1_CP2_DBD_dimeric_10_1 SELEX - 7607067 7607076 8.0E-06 AAACAGGTTT 10 ZNF410_C2H2_DBD_monomeric_17_1 SELEX - 7608148 7608164 9.0E-06 TCCATCCCAAAACAACA 17 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX + 7607966 7607984 8.0E-06 GTGACCTTGGGCAAGTCAC 19 TBX1_TBX_DBD_dimeric_20_1 SELEX + 7606985 7607004 8.0E-06 TGGTGTGAAGTCAAGTGGGT 20 V_AP2ALPHA_Q6_M01857 TRANSFAC - 7608341 7608351 9.0E-06 AGCCCCCGGCG 11 V_AP2ALPHA_Q6_M01857 TRANSFAC - 7608688 7608698 6.0E-06 CGCCCCCGGCC 11 V_BTEB3_Q5_M01865 TRANSFAC - 7607702 7607714 5.0E-06 GGAAGGGAGGAGT 13 V_BTEB3_Q5_M01865 TRANSFAC + 7608383 7608395 1.0E-06 GTGAGGGAGGTGT 13 V_ESR1_01_M02261 TRANSFAC - 7607107 7607126 3.0E-06 AGCCCCGCTCACCCTGACCC 20 V_LRH1_Q5_01_M02098 TRANSFAC - 7607967 7607977 9.0E-06 GCCCAAGGTCA 11 V_TCF4_Q5_01_M02033 TRANSFAC + 7607599 7607608 5.0E-06 ATCAAAGGGA 10 V_EGR_Q6_M00807 TRANSFAC + 7607094 7607104 3.0E-06 GTGGGGGCGGC 11 V_RFX4_03_M02789 TRANSFAC - 7607033 7607047 2.0E-06 TTGCCTAGCAACCAA 15 V_RFX4_03_M02789 TRANSFAC + 7610963 7610977 6.0E-06 TGCCATGGCAACGGG 15 V_AP2_Q6_01_M00915 TRANSFAC - 7607619 7607631 1.0E-05 GCCTCCCCAGGCC 13 V_SPZ1_01_M00446 TRANSFAC + 7609308 7609322 1.0E-05 TGAGGTGGGTATTTG 15 V_NKX24_01_M01350 TRANSFAC - 7606991 7607006 5.0E-06 CCACCCACTTGACTTC 16 V_ZNF219_01_M01122 TRANSFAC - 7608392 7608403 5.0E-06 CGCCCCCCACAC 12 V_GC_01_M00255 TRANSFAC + 7607004 7607017 1.0E-06 TGGGGGTGGGGCTT 14 V_ZFP410_03_M02832 TRANSFAC + 7608151 7608167 4.0E-06 TGTTTTGGGATGGAGGA 17 V_NKX26_01_M01322 TRANSFAC - 7606991 7607006 5.0E-06 CCACCCACTTGACTTC 16 V_RFX1_01_M00280 TRANSFAC + 7607034 7607050 1.0E-06 TGGTTGCTAGGCAACTT 17 V_RFX1_01_M00280 TRANSFAC - 7607034 7607050 0.0E+00 AAGTTGCCTAGCAACCA 17 V_SP4_03_M02810 TRANSFAC - 7608319 7608335 0.0E+00 TGTCACGCCCCCTTTGT 17 V_ZBP89_Q4_M01816 TRANSFAC + 7607512 7607521 6.0E-06 TCCTCCCCCC 10 V_ZBP89_Q4_M01816 TRANSFAC + 7609445 7609454 4.0E-06 CCCTCCCCCA 10 V_MAZ_Q6_01_M02023 TRANSFAC + 7608200 7608213 4.0E-06 CGGGGTGGAGAGGG 14 V_HMX1_01_M00433 TRANSFAC + 7606996 7607005 5.0E-06 CAAGTGGGTG 10 V_NKX25_Q5_M01043 TRANSFAC + 7608043 7608052 6.0E-06 TCCCACTTCA 10 V_RFXDC2_03_M02790 TRANSFAC - 7607033 7607047 1.0E-06 TTGCCTAGCAACCAA 15 V_HBP1_03_M02762 TRANSFAC - 7607411 7607426 4.0E-06 CCGCTGAATGAATAAG 16 V_SP1SP3_Q4_M01219 TRANSFAC - 7609127 7609137 5.0E-06 CCGCCTCCTCC 11 V_MUSCLE_INI_B_M00321 TRANSFAC - 7608666 7608686 5.0E-06 ACGCGCCAGCACCCCGGGATC 21 V_ZIC3_05_M02941 TRANSFAC + 7608766 7608780 2.0E-06 GGGCACAGCAGGAAG 15 V_RREB1_01_M00257 TRANSFAC - 7607001 7607014 5.0E-06 CCCCACCCCCACCC 14 V_PNR_01_M01650 TRANSFAC - 7607582 7607595 9.0E-06 GAGGTCCAAAATCA 14 V_RFX_Q6_M00975 TRANSFAC + 7610959 7610967 4.0E-06 CTGTTGCCA 9 V_CETS1P54_01_M00032 TRANSFAC - 7607956 7607965 9.0E-06 ACAGGAAGTC 10 V_STAF_02_M00264 TRANSFAC - 7607037 7607057 3.0E-06 GTTTACCAAGTTGCCTAGCAA 21 V_SF1_Q6_01_M01132 TRANSFAC + 7607967 7607975 7.0E-06 TGACCTTGG 9 V_NEUROD_02_M01288 TRANSFAC - 7608768 7608779 1.0E-06 TTCCTGCTGTGC 12 V_SP4_Q5_M01273 TRANSFAC + 7608473 7608483 7.0E-06 GCCCCTCCCCG 11 V_S8_01_M00099 TRANSFAC - 7607718 7607733 7.0E-06 TGTTTCCAATTATCCT 16 V_GFI1_Q6_M01067 TRANSFAC - 7607577 7607589 4.0E-06 CAAAATCACATCC 13 V_NKX25_03_M01414 TRANSFAC - 7606991 7607006 4.0E-06 CCACCCACTTGACTTC 16 V_TAL1_01_M01591 TRANSFAC + 7608005 7608017 3.0E-06 TTTCCTCATCTCT 13 V_FOXL1_02_M02857 TRANSFAC - 7608146 7608161 2.0E-06 ATCCCAAAACAACACC 16 V_T3R_Q6_M00963 TRANSFAC + 7604062 7604070 7.0E-06 CCTGTCCTT 9 V_TEF1_Q6_03_M01817 TRANSFAC + 7607642 7607650 3.0E-06 GAGGAATGT 9 V_ERR2_01_M01589 TRANSFAC - 7607964 7607975 2.0E-06 CCAAGGTCACAC 12 V_MEIS1_01_M00419 TRANSFAC + 7607178 7607189 5.0E-06 CAGTGACAGGGC 12 V_FPM315_01_M01587 TRANSFAC - 7607509 7607520 1.0E-06 GGGGGAGGAGGG 12 V_FPM315_01_M01587 TRANSFAC + 7609124 7609135 6.0E-06 CAGGGAGGAGGC 12 V_TBX15_02_M01264 TRANSFAC + 7607151 7607168 1.0E-06 GGGTGTGACCGTGTGAGA 18 V_T3RBETA_Q6_01_M02119 TRANSFAC + 7608257 7608273 8.0E-06 GGGCGATCGGAGGGCAG 17 V_ZFP281_01_M01597 TRANSFAC + 7607004 7607014 1.0E-06 TGGGGGTGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 7607467 7607477 1.0E-06 TGGGGGTGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 7607708 7607718 5.0E-06 TGGGGGAAGGG 11 V_ZFP281_01_M01597 TRANSFAC - 7609444 7609454 9.0E-06 TGGGGGAGGGA 11 V_ZFP281_04_M02831 TRANSFAC - 7607002 7607016 6.0E-06 AGCCCCACCCCCACC 15 V_ZFP281_04_M02831 TRANSFAC - 7607465 7607479 8.0E-06 TCCCCCACCCCCAAA 15 V_RFX3_04_M02788 TRANSFAC - 7607029 7607051 4.0E-06 CAAGTTGCCTAGCAACCAACCAG 23 V_UF1H3BETA_Q6_M01068 TRANSFAC + 7607002 7607015 0.0E+00 GGTGGGGGTGGGGC 14 V_ZID_01_M00085 TRANSFAC - 7610981 7610993 3.0E-06 CCGCTCCATCACC 13 V_MIF1_01_M00279 TRANSFAC + 7607034 7607051 0.0E+00 TGGTTGCTAGGCAACTTG 18 V_MIF1_01_M00279 TRANSFAC + 7610937 7610954 2.0E-06 CAGCTCCTTGGTAACTGG 18 V_SOX9_Q4_M01284 TRANSFAC + 7607598 7607608 4.0E-06 AATCAAAGGGA 11 V_RFX1_02_M00281 TRANSFAC + 7610959 7610976 0.0E+00 CTGTTGCCATGGCAACGG 18 V_RFX1_02_M00281 TRANSFAC - 7610959 7610976 0.0E+00 CCGTTGCCATGGCAACAG 18 V_NKX21_01_M01312 TRANSFAC - 7606991 7607006 1.0E-06 CCACCCACTTGACTTC 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.