Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

E2F4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 1874 E2F transcription factor 4, p107/p130-binding chr16 + 67221067 - 67226567 67226067 E2F4_E2F_DBD_dimeric_12_2 V_E2F4_04_M02847 V_E2F4_Q6_M02090 Transcription Factor Binding Sites   Download all TFBS in the E2F4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints GABPA_MA0062.2 JASPAR + 67226068 67226078 7.0E-06 GCGGAAGTGGC 11 SOX10_HMG_full_dimeric_14_1 SELEX + 67224704 67224717 1.0E-06 TGGATGTTCAGTCC 14 DLX1_homeodomain_DBD_monomeric_10_1 SELEX - 67224691 67224700 6.0E-06 AATAATTACC 10 EVX1_homeodomain_DBD_monomeric_10_1 SELEX - 67224691 67224700 7.0E-06 AATAATTACC 10 FOXF2_MA0030.1 JASPAR - 67224643 67224656 3.0E-06 TCAAGATAAACACA 14 NHLH1_MA0048.1 JASPAR + 67221649 67221660 3.0E-06 TCGCAGCTGCTC 12 NHLH1_MA0048.1 JASPAR - 67221649 67221660 1.0E-05 GAGCAGCTGCGA 12 Zfp423_MA0116.1 JASPAR + 67221622 67221636 1.0E-06 GCCCCCCAGGGGTGC 15 Zfp423_MA0116.1 JASPAR - 67221622 67221636 3.0E-06 GCACCCCTGGGGGGC 15 SOX8_HMG_DBD_dimeric_14_1 SELEX + 67224704 67224717 7.0E-06 TGGATGTTCAGTCC 14 Pax4_MA0068.1 JASPAR - 67224673 67224702 1.0E-06 TAAATAATTACCACCTTATAGTCCCTTCCC 30 SPIB_ETS_DBD_monomeric_14_1 SELEX + 67226063 67226076 9.0E-06 CGGAAGCGGAAGTG 14 POU6F2_POU_DBD_dimeric_16_1 SELEX + 67224684 67224699 1.0E-06 ATAAGGTGGTAATTAT 16 POU6F2_POU_DBD_dimeric_16_1 SELEX - 67224684 67224699 2.0E-06 ATAATTACCACCTTAT 16 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 67224690 67224704 9.0E-06 ACTAAATAATTACCA 15 MEOX2_homeodomain_DBD_monomeric_10_1 SELEX + 67224691 67224700 9.0E-06 GGTAATTATT 10 PBX1_MA0070.1 JASPAR + 67221701 67221712 2.0E-06 CCATCAATCAGA 12 Myf_MA0055.1 JASPAR - 67221549 67221560 1.0E-06 AAGCAGCTGCAG 12 GLI2_C2H2_DBD_monomeric_12_1 SELEX - 67225743 67225754 3.0E-06 GAGACCACACTA 12 ETV6_ETS_full_monomeric_10_1 SELEX + 67226067 67226076 1.0E-06 AGCGGAAGTG 10 ETV6_ETS_full_dimeric_15_1 SELEX + 67226014 67226028 0.0E+00 ACGGAAGCGGAAGCA 15 ETV6_ETS_full_dimeric_15_1 SELEX + 67226062 67226076 0.0E+00 ACGGAAGCGGAAGTG 15 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX + 67226159 67226170 8.0E-06 CGCCCCCGGGCA 12 EMX1_homeodomain_DBD_dimeric_14_1 SELEX - 67224693 67224706 8.0E-06 CCACTAAATAATTA 14 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 67224690 67224704 9.0E-06 ACTAAATAATTACCA 15 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX + 67226159 67226170 8.0E-06 CGCCCCCGGGCA 12 Zfx_MA0146.1 JASPAR - 67226307 67226320 0.0E+00 CCGGCCCAGGCCTG 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 67224690 67224703 8.0E-06 CTAAATAATTACCA 14 V_TST1_02_M01316 TRANSFAC - 67224689 67224705 9.0E-06 CACTAAATAATTACCAC 17 V_TST1_02_M01316 TRANSFAC + 67224690 67224706 7.0E-06 TGGTAATTATTTAGTGG 17 V_BACH2_01_M00490 TRANSFAC + 67224619 67224629 2.0E-06 CGTGAGTCACC 11 V_ZFP410_04_M02936 TRANSFAC + 67225865 67225881 1.0E-06 TCATTCCTCCCCAACTT 17 V_NRSF_Q4_M01028 TRANSFAC + 67226215 67226233 7.0E-06 TTCGTGTCCCTTCTGCAGG 19 V_ZFX_01_M01593 TRANSFAC - 67226263 67226278 5.0E-06 GCCCAGGCCGCACCAG 16 V_ZFX_01_M01593 TRANSFAC + 67226304 67226319 3.0E-06 GACCAGGCCTGGGCCG 16 V_DLX3_01_M01400 TRANSFAC - 67224688 67224704 2.0E-06 ACTAAATAATTACCACC 17 V_STAT_Q6_M00777 TRANSFAC - 67221686 67221698 1.0E-05 AACAGTTCTTGGA 13 V_IK_Q5_M01169 TRANSFAC - 67224591 67224600 3.0E-06 TTTGGGAGGC 10 V_MAF_Q6_M00648 TRANSFAC - 67225873 67225888 7.0E-06 TGGGATGAAGTTGGGG 16 V_NKX61_03_M01489 TRANSFAC - 67224688 67224704 1.0E-06 ACTAAATAATTACCACC 17 V_HOXC6_01_M01406 TRANSFAC - 67224687 67224703 8.0E-06 CTAAATAATTACCACCT 17 V_HOXC6_01_M01406 TRANSFAC + 67224688 67224704 7.0E-06 GGTGGTAATTATTTAGT 17 V_PITX2_Q6_M02114 TRANSFAC + 67221888 67221897 1.0E-06 TGTAATCCCA 10 V_OCTAMER_02_M01477 TRANSFAC + 67224691 67224707 5.0E-06 GGTAATTATTTAGTGGA 17 V_LYF1_01_M00141 TRANSFAC - 67224592 67224600 9.0E-06 TTTGGGAGG 9 V_PAX6_02_M01391 TRANSFAC + 67224693 67224708 7.0E-06 TAATTATTTAGTGGAT 16 V_DLX5_01_M01388 TRANSFAC + 67224689 67224704 4.0E-06 GTGGTAATTATTTAGT 16 V_NKX62_Q2_M00489 TRANSFAC + 67224689 67224700 8.0E-06 GTGGTAATTATT 12 V_NKX62_Q2_M00489 TRANSFAC - 67224691 67224702 5.0E-06 TAAATAATTACC 12 V_SPIC_01_M02042 TRANSFAC + 67226067 67226076 9.0E-06 AGCGGAAGTG 10 V_MYF_01_M01302 TRANSFAC - 67221549 67221560 1.0E-06 AAGCAGCTGCAG 12 V_SOX7_04_M02911 TRANSFAC + 67224689 67224710 4.0E-06 GTGGTAATTATTTAGTGGATGT 22 V_HIC1_03_M01073 TRANSFAC - 67226159 67226176 3.0E-06 TTGGAGTGCCCGGGGGCG 18 V_ASCL2_03_M02737 TRANSFAC + 67221647 67221663 2.0E-06 TCTCGCAGCTGCTCCAG 17 V_GADP_01_M01258 TRANSFAC - 67226065 67226076 5.0E-06 CACTTCCGCTTC 12 V_PIT1_01_M01465 TRANSFAC - 67224689 67224705 6.0E-06 CACTAAATAATTACCAC 17 V_PIT1_01_M01465 TRANSFAC + 67224690 67224706 6.0E-06 TGGTAATTATTTAGTGG 17 V_ZBRK1_01_M01105 TRANSFAC - 67221688 67221702 4.0E-06 GGCCAACAGTTCTTG 15 V_HB24_01_M01399 TRANSFAC - 67224691 67224705 3.0E-06 CACTAAATAATTACC 15 V_HIC1_02_M01072 TRANSFAC + 67226040 67226054 8.0E-06 TCCGGCTGCCCGGCG 15 V_NKX63_01_M01470 TRANSFAC - 67224688 67224704 9.0E-06 ACTAAATAATTACCACC 17 V_FREAC2_01_M00290 TRANSFAC - 67224641 67224656 6.0E-06 TCAAGATAAACACAGC 16 V_DLX7_01_M01486 TRANSFAC - 67224688 67224704 2.0E-06 ACTAAATAATTACCACC 17 V_T3R_01_M00239 TRANSFAC - 67226248 67226263 3.0E-06 GCTTGAGGTCAAGCAC 16 V_GABPBETA_Q3_M01876 TRANSFAC + 67226067 67226077 7.0E-06 AGCGGAAGTGG 11 V_BRN4_01_M01473 TRANSFAC - 67224689 67224705 5.0E-06 CACTAAATAATTACCAC 17 V_BRN4_01_M01473 TRANSFAC + 67224690 67224706 7.0E-06 TGGTAATTATTTAGTGG 17 V_CBF_01_M01079 TRANSFAC + 67224697 67224712 9.0E-06 TATTTAGTGGATGTTC 16 V_NKX61_02_M01469 TRANSFAC - 67224689 67224704 1.0E-06 ACTAAATAATTACCAC 16 V_IPF1_01_M01233 TRANSFAC - 67224692 67224701 1.0E-05 AAATAATTAC 10 V_FPM315_01_M01587 TRANSFAC - 67224075 67224086 9.0E-06 GAGGGAGGAGCC 12 V_PADS_C_M00211 TRANSFAC + 67225746 67225754 4.0E-06 TGTGGTCTC 9 V_PITX2_Q2_M00482 TRANSFAC + 67221888 67221898 1.0E-06 TGTAATCCCAG 11 V_PBX1_02_M00124 TRANSFAC + 67221700 67221714 6.0E-06 GCCATCAATCAGAGT 15 V_PBX1_03_M01017 TRANSFAC + 67221701 67221712 2.0E-06 CCATCAATCAGA 12 V_PLZF_02_M01075 TRANSFAC - 67224686 67224714 6.0E-06 CTGAACATCCACTAAATAATTACCACCTT 29 V_DLX3_02_M02051 TRANSFAC - 67224692 67224699 5.0E-06 ATAATTAC 8 V_FOXJ2_01_M00422 TRANSFAC - 67224640 67224657 5.0E-06 CTCAAGATAAACACAGCT 18 V_ZIC3_04_M02837 TRANSFAC - 67221622 67221636 1.0E-05 GCACCCCTGGGGGGC 15 V_HOXD8_01_M01432 TRANSFAC - 67224686 67224702 7.0E-06 TAAATAATTACCACCTT 17 V_PAX4_02_M00377 TRANSFAC - 67224691 67224701 0.0E+00 AAATAATTACC 11 V_LHX9_01_M01367 TRANSFAC - 67224691 67224707 7.0E-06 TCCACTAAATAATTACC 17 V_ELK1_03_M01163 TRANSFAC + 67226066 67226076 1.0E-05 AAGCGGAAGTG 11 V_ZIC2_04_M02836 TRANSFAC - 67221622 67221636 8.0E-06 GCACCCCTGGGGGGC 15 V_BRCA_01_M01082 TRANSFAC - 67224098 67224105 1.0E-05 TTCTGTTG 8 V_T3RALPHA_Q6_M01724 TRANSFAC - 67226252 67226262 2.0E-06 CTTGAGGTCAA 11

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.