Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

AFM


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
173 afamin chr4 +74342461 - 74347961 74347461

Transcription Factor Binding Sites

 
Download all TFBS in the AFM promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
GCM1_GCM_DBD_monomeric_10_1 SELEX - 74350971 74350980 1.0E-05 CATGCTGGTA 10
SOX10_HMG_full_dimeric_15_3 SELEX + 74352394 74352408 6.0E-06 TAGAATTGCAATCAT 15
THRA_nuclearreceptor_FL_dimeric_18_1 SELEX + 74350983 74351000 8.0E-06 ATCACCTTGGGAGGTGAG 18
SOX9_HMG_full_dimeric_17_3 SELEX + 74352393 74352409 1.0E-05 TTAGAATTGCAATCATT 17
Lhx8_homeodomain_DBD_dimeric_12_1 SELEX + 74352396 74352407 2.0E-06 GAATTGCAATCA 12
Lhx8_homeodomain_DBD_dimeric_12_1 SELEX - 74352396 74352407 2.0E-06 TGATTGCAATTC 12
SOX7_HMG_full_dimeric_17_2 SELEX + 74352393 74352409 7.0E-06 TTAGAATTGCAATCATT 17
Pax4_MA0068.1 JASPAR - 74347305 74347334 9.0E-06 AAATATTAACCAGAAAAAAAAATTACCTTT 30
FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 74347324 74347337 6.0E-06 GGTTAATATTTAGC 14
Sox17_HMG_DBD_dimeric_15_2 SELEX + 74352394 74352408 6.0E-06 TAGAATTGCAATCAT 15
HNF1A_homeodomain_full_dimeric_15_1 SELEX + 74347324 74347338 4.0E-06 GGTTAATATTTAGCA 15
HNF1A_homeodomain_full_dimeric_15_1 SELEX - 74347324 74347338 3.0E-06 TGCTAAATATTAACC 15
FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 74347324 74347337 6.0E-06 GGTTAATATTTAGC 14
SOX14_HMG_DBD_dimeric_15_1 SELEX + 74352394 74352408 6.0E-06 TAGAATTGCAATCAT 15
MAFK_bZIP_DBD_dimeric_21_1 SELEX + 74347342 74347362 8.0E-06 ATTCTGCAGAGTGATCAAAAA 21
MAFK_bZIP_DBD_dimeric_21_1 SELEX - 74347342 74347362 4.0E-06 TTTTTGATCACTCTGCAGAAT 21
HNF1B_homeodomain_full_dimeric_13_1 SELEX + 74347325 74347337 5.0E-06 GTTAATATTTAGC 13
HNF1B_homeodomain_full_dimeric_13_1 SELEX - 74347325 74347337 3.0E-06 GCTAAATATTAAC 13
MAFG_bZIP_full_dimeric_21_1 SELEX + 74347342 74347362 2.0E-06 ATTCTGCAGAGTGATCAAAAA 21
MAFG_bZIP_full_dimeric_21_1 SELEX - 74347342 74347362 3.0E-06 TTTTTGATCACTCTGCAGAAT 21
SOX18_HMG_full_dimeric_15_3 SELEX + 74352394 74352408 4.0E-06 TAGAATTGCAATCAT 15
LHX6_homeodomain_full_dimeric_12_1 SELEX + 74352396 74352407 2.0E-06 GAATTGCAATCA 12
LHX6_homeodomain_full_dimeric_12_1 SELEX - 74352396 74352407 1.0E-06 TGATTGCAATTC 12
Sox3_HMG_DBD_dimeric_17_3 SELEX + 74352393 74352409 6.0E-06 TTAGAATTGCAATCATT 17
HNF1B_homeodomain_full_dimeric_15_1 SELEX + 74347324 74347338 6.0E-06 GGTTAATATTTAGCA 15
HNF1B_homeodomain_full_dimeric_15_1 SELEX - 74347324 74347338 3.0E-06 TGCTAAATATTAACC 15
HNF1A_MA0046.1 JASPAR + 74347324 74347337 0.0E+00 GGTTAATATTTAGC 14
TAL1_TCF3_MA0091.1 JASPAR + 74352337 74352348 5.0E-06 TGACCAGCTGGT 12
V_HMGIY_Q3_M01010 TRANSFAC + 74347306 74347320 0.0E+00 AAGGTAATTTTTTTT 15
V_HMGIY_Q3_M01010 TRANSFAC + 74347307 74347321 7.0E-06 AGGTAATTTTTTTTT 15
V_BCL6_01_M01183 TRANSFAC + 74347319 74347334 2.0E-06 TTTCTGGTTAATATTT 16
V_PROP1_01_M01294 TRANSFAC + 74347310 74347320 5.0E-06 TAATTTTTTTT 11
V_POU2F3_01_M01476 TRANSFAC - 74350960 74350975 8.0E-06 TGGTATGTTAATGTAT 16
V_GATA_C_M00203 TRANSFAC + 74352438 74352448 4.0E-06 TGATAAGGACT 11
V_PITX2_Q6_M02114 TRANSFAC - 74352388 74352397 5.0E-06 TCTAATCCCA 10
V_TCFAP2E_04_M02926 TRANSFAC - 74347313 74347326 2.0E-06 ACCAGAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 74347314 74347327 0.0E+00 AACCAGAAAAAAAA 14
V_HNF1_C_M00206 TRANSFAC - 74347322 74347338 0.0E+00 TGCTAAATATTAACCAG 17
V_HMBOX1_01_M01456 TRANSFAC + 74347317 74347333 2.0E-06 TTTTTCTGGTTAATATT 17
V_HNF1_Q6_M00790 TRANSFAC + 74347323 74347340 0.0E+00 TGGTTAATATTTAGCAAG 18
V_HNF1_Q6_01_M01011 TRANSFAC + 74347321 74347341 1.0E-05 TCTGGTTAATATTTAGCAAGA 21
V_HNF1_Q6_01_M01011 TRANSFAC - 74347321 74347341 0.0E+00 TCTTGCTAAATATTAACCAGA 21
V_CRX_02_M01436 TRANSFAC + 74352384 74352399 1.0E-05 TGTTTGGGATTAGAAT 16
V_CIZ_01_M00734 TRANSFAC - 74347285 74347293 2.0E-06 GAAAAAATC 9
V_OSR2_04_M02889 TRANSFAC - 74352340 74352355 1.0E-05 ACATGCTACCAGCTGG 16
V_OCT2_01_M01368 TRANSFAC - 74350960 74350975 8.0E-06 TGGTATGTTAATGTAT 16
V_HNF1_01_M00132 TRANSFAC + 74347324 74347338 0.0E+00 GGTTAATATTTAGCA 15
V_GATA6_01_M00462 TRANSFAC + 74352436 74352445 6.0E-06 AATGATAAGG 10
V_TCF4_Q5_M00671 TRANSFAC - 74352448 74352455 1.0E-05 CCTTTGAA 8
V_PITX2_Q2_M00482 TRANSFAC - 74352387 74352397 2.0E-06 TCTAATCCCAA 11
V_BBX_03_M02739 TRANSFAC + 74352430 74352444 7.0E-06 AACTTCAATGATAAG 15
V_BBX_03_M02739 TRANSFAC - 74352430 74352444 9.0E-06 CTTATCATTGAAGTT 15
V_OSR1_04_M02888 TRANSFAC - 74352340 74352355 3.0E-06 ACATGCTACCAGCTGG 16
V_LEF1TCF1_Q4_M00978 TRANSFAC - 74352445 74352455 4.0E-06 CCTTTGAAGTC 11
V_SRF_06_M02916 TRANSFAC - 74347309 74347325 3.0E-06 CCAGAAAAAAAAATTAC 17
V_SRF_06_M02916 TRANSFAC - 74347310 74347326 3.0E-06 ACCAGAAAAAAAAATTA 17
V_VMAF_01_M00035 TRANSFAC - 74347343 74347361 4.0E-06 TTTTGATCACTCTGCAGAA 19
V_HNF1A_Q5_M02013 TRANSFAC + 74347324 74347334 1.0E-06 GGTTAATATTT 11
V_SOX2_Q6_M01272 TRANSFAC - 74347298 74347313 2.0E-06 ATTACCTTTGTGTTTC 16
V_PR_02_M00957 TRANSFAC + 74352293 74352319 8.0E-06 GTGTGTATAGATAGCTGTTCTTTGAAC 27
V_PAX4_02_M00377 TRANSFAC - 74347308 74347318 1.0E-06 AAAAAATTACC 11
V_GATA5_03_M02756 TRANSFAC + 74352433 74352449 7.0E-06 TTCAATGATAAGGACTT 17
V_HNF1A_01_M02162 TRANSFAC + 74347324 74347337 0.0E+00 GGTTAATATTTAGC 14
V_TCF3_05_M02920 TRANSFAC - 74347312 74347326 1.0E-06 ACCAGAAAAAAAAAT 15
V_TCF3_05_M02920 TRANSFAC - 74347313 74347327 4.0E-06 AACCAGAAAAAAAAA 15
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL