Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

PTCRA


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
171558 pre T-cell antigen receptor alpha chr6 +42878726 - 42884226 42883726

Transcription Factor Binding Sites

 
Download all TFBS in the PTCRA promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
RARB_nuclearreceptor_full_dimeric_16_1 SELEX + 42887678 42887693 9.0E-06 GCAGGCCAGGAGGTCA 16
PROX1_PROX_DBD_dimeric_12_1 SELEX - 42879188 42879199 1.0E-06 GAAGACGCCTTG 12
Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX + 42879663 42879675 5.0E-06 AGCCCTGGAGGCA 13
RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX + 42887679 42887696 5.0E-06 CAGGCCAGGAGGTCAAGG 18
SP1_MA0079.2 JASPAR - 42879377 42879386 7.0E-06 CCCCGCCCCC 10
NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX + 42887679 42887694 7.0E-06 CAGGCCAGGAGGTCAA 16
TFAP2A_TFAP_DBD_dimeric_13_1 SELEX + 42879663 42879675 8.0E-06 AGCCCTGGAGGCA 13
ELK1_MA0028.1 JASPAR - 42879405 42879414 5.0E-06 GAACCGGAAG 10
TFAP2B_TFAP_DBD_dimeric_13_1 SELEX + 42879663 42879675 5.0E-06 AGCCCTGGAGGCA 13
Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX + 42887679 42887693 8.0E-06 CAGGCCAGGAGGTCA 15
V_ELK1_04_M01165 TRANSFAC - 42879403 42879413 1.0E-05 AACCGGAAGGA 11
V_LRH1_Q5_01_M02098 TRANSFAC + 42879775 42879785 2.0E-06 TTTCAAGGCCA 11
V_MMEF2_Q6_M00405 TRANSFAC + 42879717 42879732 9.0E-06 ATTATTAAAATAGCCA 16
V_MEF2_02_M00231 TRANSFAC + 42879713 42879734 4.0E-06 CAGGATTATTAAAATAGCCATC 22
V_SP1_03_M02281 TRANSFAC - 42879377 42879386 7.0E-06 CCCCGCCCCC 10
V_PITX2_Q6_M02114 TRANSFAC + 42879804 42879813 1.0E-06 TGTAATCCCA 10
V_MEF2A_Q6_M02024 TRANSFAC - 42879719 42879728 5.0E-06 TATTTTAATA 10
V_RPC155_01_M01798 TRANSFAC + 42887570 42887585 2.0E-06 CTAGGAGTTTGAGACC 16
V_KROX_Q6_M00982 TRANSFAC - 42879372 42879385 5.0E-06 CCCGCCCCCGAGCC 14
V_KROX_Q6_M00982 TRANSFAC - 42879378 42879391 4.0E-06 TCCACCCCCGCCCC 14
V_AMEF2_Q6_M00403 TRANSFAC + 42879717 42879734 6.0E-06 ATTATTAAAATAGCCATC 18
V_MAZ_Q6_01_M02023 TRANSFAC + 42879383 42879396 4.0E-06 GGGGGTGGAGGGGG 14
V_CDX2_Q5_M00729 TRANSFAC - 42879716 42879729 5.0E-06 CTATTTTAATAATC 14
V_MEF2_Q6_01_M00941 TRANSFAC - 42879720 42879731 1.0E-06 GGCTATTTTAAT 12
V_SP4_Q5_M01273 TRANSFAC - 42879377 42879387 5.0E-06 CCCCCGCCCCC 11
V_PTF1BETA_Q6_M00657 TRANSFAC + 42879559 42879572 5.0E-06 GGGGAACCCACCGC 14
V_LRH1_Q5_M01142 TRANSFAC - 42879775 42879786 3.0E-06 CTGGCCTTGAAA 12
V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 42879507 42879515 8.0E-06 GAGGGTGGG 9
V_PITX2_Q2_M00482 TRANSFAC + 42879804 42879814 1.0E-06 TGTAATCCCAG 11
V_E47_01_M00002 TRANSFAC - 42879525 42879539 0.0E+00 GGGGCAGGTGTCCCT 15
V_ZIC3_04_M02837 TRANSFAC - 42879548 42879562 4.0E-06 CCCCCCCGGGAGGGG 15
V_ZIC3_04_M02837 TRANSFAC + 42879549 42879563 4.0E-06 CCCTCCCGGGGGGGA 15
V_ZIC1_04_M02835 TRANSFAC + 42879549 42879562 7.0E-06 CCCTCCCGGGGGGG 14
V_ZIC1_04_M02835 TRANSFAC - 42879549 42879562 7.0E-06 CCCCCCCGGGAGGG 14
V_SP1_Q2_01_M00933 TRANSFAC - 42879377 42879386 4.0E-06 CCCCGCCCCC 10
V_MEF2A_05_M01301 TRANSFAC - 42879720 42879731 2.0E-06 GGCTATTTTAAT 12
V_ELK1_03_M01163 TRANSFAC - 42879403 42879413 1.0E-05 AACCGGAAGGA 11
V_ZIC2_04_M02836 TRANSFAC + 42879549 42879563 6.0E-06 CCCTCCCGGGGGGGA 15
V_GLIS2_04_M02863 TRANSFAC + 42879717 42879730 3.0E-06 ATTATTAAAATAGC 14
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL