Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ADAMTS19 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 171019 ADAM metallopeptidase with thrombospondin type 1 motif, 19 chr5 + 128791102 - 128796602 128796102 Transcription Factor Binding Sites   Download all TFBS in the ADAMTS19 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 128796291 128796299 4.0E-06 GCAATAAAA 9 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 128796291 128796300 1.0E-06 GCAATAAAAA 10 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 128796291 128796308 1.0E-05 GCAATAAAAATGAGCTTG 18 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX + 128796291 128796300 0.0E+00 GCAATAAAAA 10 RARB_nuclearreceptor_full_dimeric_16_1 SELEX + 128796313 128796328 8.0E-06 GCAGGTTAAGGGGTCA 16 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 128791528 128791539 8.0E-06 AAAGTCAACAAG 12 LHX2_homeodomain_DBD_dimeric_15_1 SELEX - 128796392 128796406 1.0E-06 TTATTGCTCTAATTA 15 TBX20_TBX_DBD_dimeric_19_1 SELEX + 128795178 128795196 4.0E-06 ATGTGCGAATTTGACAAAA 19 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 128791529 128791539 8.0E-06 AAAGTCAACAA 11 EWSR1-FLI1_MA0149.1 JASPAR - 128796191 128796208 2.0E-06 GAAAGGAAGCGAGAAAGT 18 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 128796401 128796414 1.0E-06 CAATAATATTTGCA 14 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 128796290 128796299 2.0E-06 AGCAATAAAA 10 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 128796401 128796414 1.0E-06 CAATAATATTTGCA 14 POU6F2_POU_DBD_dimeric_16_1 SELEX + 128796391 128796406 9.0E-06 CTAATTAGAGCAATAA 16 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 128796291 128796299 3.0E-06 GCAATAAAA 9 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 128796291 128796300 2.0E-06 GCAATAAAAA 10 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 128796290 128796300 0.0E+00 AGCAATAAAAA 11 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 128796401 128796414 9.0E-06 CAATAATATTTGCA 14 NFATC1_NFAT_full_dimeric_20_1 SELEX + 128796822 128796841 4.0E-06 AGTGGGAAGTCGTGTTTCCT 20 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX + 128796314 128796329 1.0E-06 CAGGTTAAGGGGTCAA 16 MZF1_5-13_MA0057.1 JASPAR + 128796083 128796092 5.0E-06 GTATGGGGAA 10 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 128796291 128796300 2.0E-06 GCAATAAAAA 10 TBX20_TBX_full_dimeric_16_1 SELEX - 128795584 128795599 5.0E-06 TGGTGTCACAGTCTCA 16 TBX15_TBX_DBD_dimeric_19_1 SELEX - 128795178 128795196 7.0E-06 TTTTGTCAAATTCGCACAT 19 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX + 128796391 128796407 7.0E-06 CTAATTAGAGCAATAAT 17 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX - 128796391 128796407 3.0E-06 ATTATTGCTCTAATTAG 17 Myf_MA0055.1 JASPAR - 128796123 128796134 6.0E-06 AGGCAGCAGCAG 12 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 128796291 128796300 2.0E-06 GCAATAAAAA 10 CPEB1_RRM_full_monomeric_8_1 SELEX + 128796293 128796300 4.0E-06 AATAAAAA 8 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX + 128796314 128796328 3.0E-06 CAGGTTAAGGGGTCA 15 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 128796290 128796300 1.0E-06 AGCAATAAAAA 11 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 128791526 128791538 9.0E-06 AAGTCAACAAGCA 13 CDX2_homeodomain_DBD_monomeric_9_1 SELEX + 128796291 128796299 3.0E-06 GCAATAAAA 9 CDX1_homeodomain_DBD_monomeric_9_1 SELEX + 128796291 128796299 3.0E-06 GCAATAAAA 9 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 128796290 128796300 0.0E+00 AGCAATAAAAA 11 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX + 128796291 128796300 4.0E-06 GCAATAAAAA 10 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 128791523 128791536 7.0E-06 GTCAACAAGCAAAA 14 V_HOXA9_01_M01351 TRANSFAC + 128796288 128796304 1.0E-05 GTAGCAATAAAAATGAG 17 V_MTF1_01_M01242 TRANSFAC + 128795556 128795575 1.0E-06 GTGTGCGGAGCTTGGCACAC 20 V_AREB6_01_M00412 TRANSFAC - 128796170 128796182 1.0E-05 AACTTACCTGAAA 13 V_MMEF2_Q6_M00405 TRANSFAC + 128796290 128796305 7.0E-06 AGCAATAAAAATGAGC 16 V_FOXJ2_02_M00423 TRANSFAC + 128796400 128796413 1.0E-06 GCAATAATATTTGC 14 V_CEBP_01_M00159 TRANSFAC + 128796407 128796419 3.0E-06 TATTTGCAAAGGT 13 V_NERF_Q2_M00531 TRANSFAC - 128797268 128797285 1.0E-06 CGCCAGGAAGCGGCCGTC 18 V_HOXD13_01_M01404 TRANSFAC + 128796288 128796303 4.0E-06 GTAGCAATAAAAATGA 16 V_MYF_01_M01302 TRANSFAC - 128796123 128796134 6.0E-06 AGGCAGCAGCAG 12 V_ZFP105_03_M02827 TRANSFAC + 128796290 128796304 8.0E-06 AGCAATAAAAATGAG 15 V_FOXO1_02_M00474 TRANSFAC + 128791526 128791539 1.0E-05 TGCTTGTTGACTTT 14 V_ARID5A_03_M02736 TRANSFAC + 128796403 128796416 6.0E-06 ATAATATTTGCAAA 14 V_HOXB9_01_M01426 TRANSFAC + 128796288 128796303 1.0E-06 GTAGCAATAAAAATGA 16 V_HOXB9_01_M01426 TRANSFAC + 128796397 128796412 5.0E-06 AGAGCAATAATATTTG 16 V_CDX2_01_M01449 TRANSFAC + 128796287 128796302 8.0E-06 GGTAGCAATAAAAATG 16 V_CDX2_01_M01449 TRANSFAC + 128796396 128796411 3.0E-06 TAGAGCAATAATATTT 16 V_CDX1_01_M01373 TRANSFAC + 128796396 128796411 7.0E-06 TAGAGCAATAATATTT 16 V_GR_Q6_M00192 TRANSFAC - 128795782 128795800 1.0E-05 TCTATTTTCTGTGTTCTGG 19 V_MEF2_04_M00233 TRANSFAC - 128796386 128796407 6.0E-06 ATTATTGCTCTAATTAGAAGGA 22 V_LMO2COM_01_M00277 TRANSFAC - 128797429 128797440 3.0E-06 CCACAGGTGCTG 12 V_MYOD_01_M00001 TRANSFAC - 128797429 128797440 9.0E-06 CCACAGGTGCTG 12 V_POU6F1_02_M01462 TRANSFAC + 128796293 128796309 5.0E-06 AATAAAAATGAGCTTGA 17 V_TCFE2A_03_M02823 TRANSFAC - 128797426 128797442 0.0E+00 CTCCACAGGTGCTGAAA 17 V_FOXO3_01_M00477 TRANSFAC + 128791526 128791539 3.0E-06 TGCTTGTTGACTTT 14 V_EWSR1FLI1_01_M02252 TRANSFAC - 128796191 128796208 2.0E-06 GAAAGGAAGCGAGAAAGT 18 V_HOXA10_01_M01464 TRANSFAC + 128796288 128796303 4.0E-06 GTAGCAATAAAAATGA 16 V_SEF1_C_M00214 TRANSFAC + 128796786 128796804 7.0E-06 CGCCCGCAGAGCTGCAGTT 19 V_FOXK1_03_M02752 TRANSFAC - 128791525 128791541 8.0E-06 AGAAAGTCAACAAGCAA 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.