Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

OLFML2A Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 169611 olfactomedin-like 2A chr9 + 127534436 - 127539936 127539436 Transcription Factor Binding Sites   Download all TFBS in the OLFML2A promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NKX2-8_homeodomain_full_monomeric_9_1 SELEX + 127534586 127534594 3.0E-06 CCACTTGAA 9 CTCF_MA0139.1 JASPAR + 127534470 127534488 0.0E+00 CGGCCACCAGGTGGCGCGC 19 CTCF_MA0139.1 JASPAR + 127536844 127536862 0.0E+00 CAGCCAGCAGGGGGCAGAG 19 NF-kappaB_MA0061.1 JASPAR - 127536948 127536957 9.0E-06 GGGGATTCCC 10 NF-kappaB_MA0061.1 JASPAR + 127544326 127544335 3.0E-06 GGGACTTTCC 10 Tp53_p53l_DBD_dimeric_18_1 SELEX + 127541595 127541612 1.0E-06 TCAGGTATGATGACAAGT 18 NFIA_NFI_full_dimeric_15_1 SELEX + 127544339 127544353 4.0E-06 TTGGCACAACTCCAG 15 Zfp652_C2H2_DBD_monomeric_13_1 SELEX + 127542186 127542198 1.0E-06 CTAAAGGGTTAAG 13 TBX1_TBX_DBD_dimeric_23_1 SELEX - 127542900 127542922 9.0E-06 CCTCACAGTCTTGATGTGTCGAA 23 NFIX_NFI_full_dimeric_15_2 SELEX - 127544339 127544353 5.0E-06 CTGGAGTTGTGCCAA 15 NFKB1_MA0105.1 JASPAR - 127536947 127536957 9.0E-06 GGGGATTCCCT 11 NFKB1_MA0105.1 JASPAR - 127536948 127536958 9.0E-06 GGGGGATTCCC 11 EBF1_MA0154.1 JASPAR - 127542123 127542132 5.0E-06 ACCCCAGGGA 10 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 127536127 127536140 8.0E-06 AAATAACATTAGTA 14 ZNF524_C2H2_full_dimeric_12_1 SELEX + 127539649 127539660 5.0E-06 CCCCTCGGACCC 12 NFKB2_NFAT_DBD_dimeric_13_1 SELEX + 127536947 127536959 8.0E-06 AGGGAATCCCCCC 13 Ar_MA0007.1 JASPAR - 127536693 127536714 1.0E-06 CTTGGCACATGCTGTTCCTTCC 22 Ar_MA0007.1 JASPAR + 127536978 127536999 3.0E-06 TTAAGTACGCTCTGTCCCGTTT 22 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 127541975 127541985 8.0E-06 AAAAATAAAAA 11 ZNF740_C2H2_full_monomeric_10_1 SELEX - 127541825 127541834 3.0E-06 CCCCCCCCAC 10 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX - 127537085 127537098 2.0E-06 AATGCAAAAAGTCA 14 RELA_MA0107.1 JASPAR + 127542825 127542834 5.0E-06 GGGAGTTTCC 10 RELA_MA0107.1 JASPAR + 127544326 127544335 6.0E-06 GGGACTTTCC 10 ESR1_MA0112.2 JASPAR - 127540190 127540209 7.0E-06 AACCCAGGTCGGCTTGACAC 20 NFATC1_NFAT_full_dimeric_20_1 SELEX - 127542363 127542382 2.0E-06 GATGGAAACTCAAAATCCAG 20 CTCF_C2H2_full_monomeric_17_1 SELEX - 127534471 127534487 1.0E-06 CGCGCCACCTGGTGGCC 17 NR3C2_nuclearreceptor_DBD_dimeric_17_1 SELEX + 127536696 127536712 4.0E-06 AGGAACAGCATGTGCCA 17 NR3C2_nuclearreceptor_DBD_dimeric_17_1 SELEX - 127536696 127536712 4.0E-06 TGGCACATGCTGTTCCT 17 ESR1_nuclearreceptor_DBD_dimeric_17_1 SELEX + 127540189 127540205 3.0E-06 GGTGTCAAGCCGACCTG 17 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 127541975 127541985 4.0E-06 AAAAATAAAAA 11 NKX2-3_homeodomain_full_monomeric_10_1 SELEX + 127534585 127534594 8.0E-06 CCCACTTGAA 10 TBX15_TBX_DBD_dimeric_19_1 SELEX + 127542189 127542207 8.0E-06 AAGGGTTAAGTTGGCCCCT 19 INSM1_MA0155.1 JASPAR - 127541930 127541941 7.0E-06 TGTCTGGGGGAG 12 NFIB_NFI_full_dimeric_15_1 SELEX + 127544339 127544353 3.0E-06 TTGGCACAACTCCAG 15 Pou5f1_MA0142.1 JASPAR + 127537095 127537109 2.0E-06 CATTGTTTTTCAGAT 15 SPDEF_ETS_full_putative-multimer_16_1 SELEX - 127537044 127537059 8.0E-06 GGAGTAAGAACTTTCA 16 Zfp740_C2H2_DBD_monomeric_10_1 SELEX - 127541825 127541834 5.0E-06 CCCCCCCCAC 10 CPEB1_RRM_full_monomeric_8_1 SELEX + 127541978 127541985 4.0E-06 AATAAAAA 8 FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX - 127536830 127536843 4.0E-06 TTCCCCCACATGAC 14 PLAG1_MA0163.1 JASPAR + 127541567 127541580 6.0E-06 GGGGCCCTCTGGGA 14 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 127536832 127536843 7.0E-06 TTCCCCCACATG 12 Sox2_MA0143.1 JASPAR + 127537094 127537108 2.0E-06 GCATTGTTTTTCAGA 15 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 127541973 127541985 7.0E-06 GGAAAAATAAAAA 13 NR3C1_nuclearreceptor_DBD_dimeric_17_1 SELEX + 127536696 127536712 3.0E-06 AGGAACAGCATGTGCCA 17 NR3C1_nuclearreceptor_DBD_dimeric_17_1 SELEX - 127536696 127536712 3.0E-06 TGGCACATGCTGTTCCT 17 RREB1_MA0073.1 JASPAR - 127541809 127541828 1.0E-06 CCACCACACACACACACAAC 20 RREB1_MA0073.1 JASPAR - 127541811 127541830 0.0E+00 CCCCACCACACACACACACA 20 RREB1_MA0073.1 JASPAR - 127541813 127541832 0.0E+00 CCCCCCACCACACACACACA 20 RREB1_MA0073.1 JASPAR - 127541816 127541835 1.0E-06 CCCCCCCCCACCACACACAC 20 RREB1_MA0073.1 JASPAR - 127541817 127541836 8.0E-06 CCCCCCCCCCACCACACACA 20 RREB1_MA0073.1 JASPAR + 127541939 127541958 5.0E-06 ACACCTCCCACCCCCAAACC 20 AR_nuclearreceptor_full_dimeric_17_1 SELEX + 127536696 127536712 2.0E-06 AGGAACAGCATGTGCCA 17 AR_nuclearreceptor_full_dimeric_17_1 SELEX - 127536696 127536712 2.0E-06 TGGCACATGCTGTTCCT 17 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 127541975 127541988 8.0E-06 AAAAATAAAAATCA 14 V_FOXP1_01_M00987 TRANSFAC - 127541743 127541762 1.0E-05 TTCTTTGTCTCTGCTTTGTT 20 V_CEBPG_Q6_M00622 TRANSFAC - 127541777 127541789 6.0E-06 CTCACTACACAAA 13 V_NFKAPPAB65_01_M00052 TRANSFAC + 127542825 127542834 7.0E-06 GGGAGTTTCC 10 V_NFKAPPAB65_01_M00052 TRANSFAC + 127544326 127544335 7.0E-06 GGGACTTTCC 10 V_NFKB_C_M00208 TRANSFAC + 127544325 127544336 2.0E-06 AGGGACTTTCCT 12 V_MEIS1_02_M01419 TRANSFAC - 127536263 127536278 1.0E-05 ATTGGGCTGTCAATGC 16 V_TCFE2A_04_M02927 TRANSFAC + 127542763 127542779 5.0E-06 TGGATCAGATGTTCCAG 17 V_ESR1_01_M02261 TRANSFAC - 127540190 127540209 7.0E-06 AACCCAGGTCGGCTTGACAC 20 V_NF1A_Q6_M02103 TRANSFAC - 127544338 127544353 3.0E-06 CTGGAGTTGTGCCAAG 16 V_ZEC_01_M01081 TRANSFAC + 127541801 127541813 7.0E-06 CTTGCTAGGTTGT 13 V_HMGIY_Q3_M01010 TRANSFAC - 127541977 127541991 3.0E-06 ACTTGATTTTTATTT 15 V_BCL6_01_M01183 TRANSFAC + 127537088 127537103 3.0E-06 CTTTTTGCATTGTTTT 16 V_MMEF2_Q6_M00405 TRANSFAC - 127536131 127536146 2.0E-06 CTCTTTAAATAACATT 16 V_STAT_Q6_M00777 TRANSFAC - 127541533 127541545 7.0E-06 GATGTTTCTTAGA 13 V_POU5F1_02_M02245 TRANSFAC + 127537095 127537109 2.0E-06 CATTGTTTTTCAGAT 15 V_HOXA13_02_M01297 TRANSFAC + 127541977 127541985 4.0E-06 AAATAAAAA 9 V_EBOX_Q6_01_M01034 TRANSFAC - 127536829 127536838 8.0E-06 CCACATGACC 10 V_SP1_Q6_01_M00931 TRANSFAC + 127539359 127539368 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 127539364 127539373 7.0E-06 GGGGCGGGGT 10 V_MEF2_02_M00231 TRANSFAC - 127536130 127536151 9.0E-06 AACCACTCTTTAAATAACATTA 22 V_NKX25_Q6_M02108 TRANSFAC + 127534585 127534595 1.0E-06 CCCACTTGAAG 11 V_P50P50_Q3_M01223 TRANSFAC + 127536946 127536958 1.0E-06 GAGGGAATCCCCC 13 V_MAF_Q6_M00648 TRANSFAC - 127541548 127541563 6.0E-06 TGGAAGGAAGGTTGGG 16 V_SP1_02_M01303 TRANSFAC + 127539364 127539374 3.0E-06 GGGGCGGGGTG 11 V_AIRE_02_M01000 TRANSFAC - 127536110 127536134 0.0E+00 CATTAGTAAGAGGTTCCATTTATTA 25 V_TCFAP2E_04_M02926 TRANSFAC - 127536971 127536984 4.0E-06 TACTTAAAAGAAAT 14 V_MEF2A_Q6_M02024 TRANSFAC + 127536136 127536145 4.0E-06 TATTTAAAGA 10 V_TGIF2_01_M01407 TRANSFAC - 127536263 127536278 8.0E-06 ATTGGGCTGTCAATGC 16 V_AP1_Q6_M00174 TRANSFAC - 127541784 127541794 6.0E-06 GCTGACTCACT 11 V_HMGA2_01_M01300 TRANSFAC + 127534425 127534439 1.0E-06 AAAATCCCGAATTTT 4 V_HNF6_Q6_M00639 TRANSFAC + 127542168 127542179 9.0E-06 TGAAGTCAATGT 12 V_HMBOX1_01_M01456 TRANSFAC - 127542339 127542355 5.0E-06 GAGACCTAGTTATAAAC 17 V_ZNF219_01_M01122 TRANSFAC - 127541827 127541838 1.0E-06 CACCCCCCCCCC 12 V_SOX7_03_M02807 TRANSFAC - 127537087 127537108 2.0E-06 TCTGAAAAACAATGCAAAAAGT 22 V_ZFP105_03_M02827 TRANSFAC - 127536129 127536143 1.0E-06 TTTAAATAACATTAG 15 V_ZFP105_03_M02827 TRANSFAC + 127541974 127541988 4.0E-06 GAAAAATAAAAATCA 15 V_ZFP105_03_M02827 TRANSFAC + 127541978 127541992 9.0E-06 AATAAAAATCAAGTG 15 V_OCT1_03_M00137 TRANSFAC - 127542058 127542070 1.0E-05 GTGATAATGAAAA 13 V_FKLF_Q5_M01837 TRANSFAC - 127541943 127541952 2.0E-06 GGGGTGGGAG 10 V_MYCMAX_02_M00123 TRANSFAC + 127542483 127542494 6.0E-06 AACCACATGACA 12 V_ZBP89_Q4_M01816 TRANSFAC + 127541928 127541937 4.0E-06 CCCTCCCCCA 10 V_CEBPD_Q6_M00621 TRANSFAC - 127535517 127535528 5.0E-06 AATTGCGCCATC 12 V_NFKB_Q6_M00194 TRANSFAC + 127544324 127544337 8.0E-06 CAGGGACTTTCCTG 14 V_HOXB9_01_M01426 TRANSFAC + 127541973 127541988 9.0E-06 GGAAAAATAAAAATCA 16 V_SP1_Q6_M00196 TRANSFAC + 127539357 127539369 7.0E-06 GCGGGGCGGGGCG 13 V_SOX_Q6_M01014 TRANSFAC - 127541739 127541751 6.0E-06 TGCTTTGTTTAGA 13 V_MEF2_03_M00232 TRANSFAC - 127536130 127536151 2.0E-06 AACCACTCTTTAAATAACATTA 22 V_MATH1_Q2_M01716 TRANSFAC - 127534474 127534483 9.0E-06 CCACCTGGTG 10 V_PAX6_Q2_M00979 TRANSFAC - 127542771 127542784 5.0E-06 CTGGCCTGGAACAT 14 V_GR_01_M00955 TRANSFAC - 127537118 127537144 4.0E-06 AGTAAATATCGTGTATGTTCTTATGGA 27 V_AR_04_M01201 TRANSFAC - 127536697 127536711 5.0E-06 GGCACATGCTGTTCC 15 V_AR_04_M01201 TRANSFAC - 127536981 127536995 1.0E-06 GGGACAGAGCGTACT 15 V_TAL1BETAE47_01_M00065 TRANSFAC + 127542763 127542778 8.0E-06 TGGATCAGATGTTCCA 16 V_SOX12_04_M02900 TRANSFAC + 127541749 127541764 1.0E-06 GCAGAGACAAAGAAAA 16 V_NFKAPPAB50_01_M00051 TRANSFAC - 127536948 127536957 2.0E-06 GGGGATTCCC 10 V_MEF2_Q6_01_M00941 TRANSFAC + 127536133 127536144 8.0E-06 TGTTATTTAAAG 12 V_EBF1_01_M02267 TRANSFAC - 127542123 127542132 5.0E-06 ACCCCAGGGA 10 V_STAT4_Q5_M02117 TRANSFAC - 127536972 127536981 2.0E-06 TTAAAAGAAA 10 V_SMAD4_Q6_M00733 TRANSFAC + 127541785 127541799 3.0E-06 GTGAGTCAGCCAAAC 15 V_PPARA_02_M00518 TRANSFAC + 127536826 127536844 3.0E-06 TCAGGTCATGTGGGGGAAC 19 V_AP1_01_M00517 TRANSFAC + 127541783 127541795 4.0E-06 TAGTGAGTCAGCC 13 V_SP1_01_M00008 TRANSFAC + 127539364 127539373 3.0E-06 GGGGCGGGGT 10 V_CTCF_02_M01259 TRANSFAC + 127534467 127534486 0.0E+00 CTGCGGCCACCAGGTGGCGC 20 V_CTCF_02_M01259 TRANSFAC + 127536841 127536860 0.0E+00 GAACAGCCAGCAGGGGGCAG 20 V_OCT4_02_M01124 TRANSFAC + 127537096 127537110 2.0E-06 ATTGTTTTTCAGATA 15 V_SOX11_03_M02795 TRANSFAC + 127534590 127534606 9.0E-06 TTGAAGACAAAGAACGA 17 V_SOX11_03_M02795 TRANSFAC - 127537090 127537106 3.0E-06 TGAAAAACAATGCAAAA 17 V_CTCF_01_M01200 TRANSFAC + 127534469 127534488 0.0E+00 GCGGCCACCAGGTGGCGCGC 20 V_CTCF_01_M01200 TRANSFAC + 127536843 127536862 0.0E+00 ACAGCCAGCAGGGGGCAGAG 20 V_INSM1_01_M02268 TRANSFAC - 127541930 127541941 7.0E-06 TGTCTGGGGGAG 12 V_BLIMP1_Q6_M01066 TRANSFAC + 127536218 127536233 5.0E-06 AAACAAGGGAAATGAC 16 V_FOXO1_Q5_M01216 TRANSFAC + 127536216 127536224 8.0E-06 AAAAACAAG 9 V_ELK1_01_M00007 TRANSFAC - 127542210 127542225 3.0E-06 GGAACAGGAAGCCCAA 16 V_ZFP691_04_M02937 TRANSFAC - 127536186 127536202 1.0E-06 TATTTGACTCCTCCCAG 17 V_SP4_Q5_M01273 TRANSFAC - 127539358 127539368 2.0E-06 GCCCCGCCCCG 11 V_USF_Q6_01_M00796 TRANSFAC + 127542483 127542494 5.0E-06 AACCACATGACA 12 V_MTF1_06_M02882 TRANSFAC + 127541532 127541545 9.0E-06 ATCTAAGAAACATC 14 V_MTF1_06_M02882 TRANSFAC + 127541977 127541990 7.0E-06 AAATAAAAATCAAG 14 V_POU5F1_01_M01307 TRANSFAC - 127537089 127537098 0.0E+00 AATGCAAAAA 10 V_MRG2_01_M01395 TRANSFAC - 127536263 127536278 5.0E-06 ATTGGGCTGTCAATGC 16 V_PKNOX2_01_M01411 TRANSFAC - 127536263 127536278 6.0E-06 ATTGGGCTGTCAATGC 16 V_EOMES_04_M02851 TRANSFAC + 127542798 127542813 3.0E-06 GTTTAGGTGTTGCTTC 16 V_AREB6_02_M00413 TRANSFAC + 127540260 127540271 1.0E-06 ATTCACCTGTAG 12 V_ZBTB12_04_M02928 TRANSFAC + 127537065 127537079 9.0E-06 TCTCCTTAGAACCAC 15 V_MEF3_B_M00319 TRANSFAC - 127541628 127541640 9.0E-06 TGATCAGGTTACC 13 V_SRF_Q4_M00810 TRANSFAC + 127536744 127536761 9.0E-06 CCCATTTGAGGAGCTGGG 18 V_TBX22_01_M01195 TRANSFAC - 127542189 127542207 1.0E-05 AGGGGCCAACTTAACCCTT 19 V_SOX8_03_M02808 TRANSFAC + 127537090 127537106 4.0E-06 TTTTGCATTGTTTTTCA 17 V_NFKAPPAB_01_M00054 TRANSFAC - 127536948 127536957 9.0E-06 GGGGATTCCC 10 V_NFKAPPAB_01_M00054 TRANSFAC + 127544326 127544335 3.0E-06 GGGACTTTCC 10 V_SOX2_01_M02246 TRANSFAC + 127537094 127537108 2.0E-06 GCATTGTTTTTCAGA 15 V_ZFP281_04_M02831 TRANSFAC - 127541824 127541838 2.0E-06 CACCCCCCCCCCACC 15 V_ZFP281_04_M02831 TRANSFAC - 127541825 127541839 1.0E-06 ACACCCCCCCCCCAC 15 V_ZFP281_04_M02831 TRANSFAC - 127541828 127541842 7.0E-06 TAAACACCCCCCCCC 15 V_SRF_06_M02916 TRANSFAC + 127541972 127541988 6.0E-06 GGGAAAAATAAAAATCA 17 V_SOX2_Q6_M01272 TRANSFAC + 127537090 127537105 6.0E-06 TTTTGCATTGTTTTTC 16 V_NFE2_01_M00037 TRANSFAC - 127541914 127541924 8.0E-06 TGCTGAGTCCC 11 V_IRF1_01_M00062 TRANSFAC + 127541974 127541986 5.0E-06 GAAAAATAAAAAT 13 V_MEF2_01_M00006 TRANSFAC - 127536131 127536146 8.0E-06 CTCTTTAAATAACATT 16 V_MEF2A_05_M01301 TRANSFAC + 127536133 127536144 5.0E-06 TGTTATTTAAAG 12 V_HMEF2_Q6_M00406 TRANSFAC - 127536131 127536146 1.0E-05 CTCTTTAAATAACATT 16 V_TAACC_B_M00331 TRANSFAC + 127541750 127541772 5.0E-06 CAGAGACAAAGAAAACCCAACAC 23 V_TCF3_05_M02920 TRANSFAC + 127541971 127541985 1.0E-06 TGGGAAAAATAAAAA 15 V_AR_01_M00481 TRANSFAC + 127536697 127536711 2.0E-06 GGAACAGCATGTGCC 15 V_AR_01_M00481 TRANSFAC - 127536981 127536995 1.0E-05 GGGACAGAGCGTACT 15 V_SMAD1_01_M01590 TRANSFAC - 127537093 127537104 9.0E-06 AAAAACAATGCA 12 V_NANOG_02_M01247 TRANSFAC - 127536124 127536143 6.0E-06 TTTAAATAACATTAGTAAGA 20 V_NANOG_02_M01247 TRANSFAC + 127536212 127536231 2.0E-06 TGAGAAAAACAAGGGAAATG 20 V_NANOG_02_M01247 TRANSFAC - 127537089 127537108 0.0E+00 TCTGAAAAACAATGCAAAAA 20 V_OCT4_01_M01125 TRANSFAC + 127537095 127537109 4.0E-06 CATTGTTTTTCAGAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.