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COCH Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 1690 cochlin chr14 + 31338740 - 31344240 31343740 Transcription Factor Binding Sites   Download all TFBS in the COCH promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXO4_forkhead_DBD_dimeric_14_1 SELEX - 31347557 31347570 9.0E-06 AAAAACTTGCTTAC 14 SOX10_HMG_full_dimeric_15_3 SELEX + 31346051 31346065 1.0E-05 ATGGAGTGCAGTGAT 15 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX + 31343378 31343389 3.0E-06 TGACAGCTCTCA 12 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX - 31343378 31343389 5.0E-06 TGAGAGCTGTCA 12 Zfp652_C2H2_DBD_monomeric_13_1 SELEX - 31344458 31344470 6.0E-06 TGCAGGGGTTAAC 13 SRY_HMG_DBD_dimeric_13_2 SELEX + 31341961 31341973 8.0E-06 TGAATAGCATCTA 13 TBP_MA0108.2 JASPAR + 31339223 31339237 5.0E-06 CTATATATACCCAGG 15 Pknox2_MEIS_DBD_dimeric_12_1 SELEX + 31343378 31343389 4.0E-06 TGACAGCTCTCA 12 Pknox2_MEIS_DBD_dimeric_12_1 SELEX - 31343378 31343389 3.0E-06 TGAGAGCTGTCA 12 SOX15_HMG_full_dimeric_15_3 SELEX + 31341960 31341974 8.0E-06 CTGAATAGCATCTAC 15 TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 31343378 31343389 4.0E-06 TGACAGCTCTCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 31343378 31343389 4.0E-06 TGAGAGCTGTCA 12 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX + 31343343 31343360 7.0E-06 AAGTTGAGAAGTTCGGTT 18 MAFF_bZIP_DBD_dimeric_15_1 SELEX - 31343429 31343443 7.0E-06 CTGCTGAGGCAGCGG 15 Pax4_MA0068.1 JASPAR - 31344881 31344910 2.0E-06 GGAAAATACACCAAACCACACACCCATACC 30 Klf4_MA0039.2 JASPAR + 31343407 31343416 5.0E-06 TGGGTGGGGC 10 ZNF524_C2H2_full_dimeric_12_1 SELEX - 31343823 31343834 8.0E-06 TCCCTCGCACCC 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX + 31343378 31343389 4.0E-06 TGACAGCTCTCA 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 31343378 31343389 1.0E-06 TGAGAGCTGTCA 12 T_MA0009.1 JASPAR + 31344792 31344802 7.0E-06 CTAGGTGTAAC 11 ATF4_bZIP_DBD_dimeric_13_1 SELEX + 31346059 31346071 9.0E-06 CAGTGATGCAATC 13 MAFK_bZIP_full_dimeric_15_1 SELEX - 31343429 31343443 4.0E-06 CTGCTGAGGCAGCGG 15 CTCF_C2H2_full_monomeric_17_1 SELEX - 31343625 31343641 9.0E-06 TTCGCCCCCTGCCGGCC 17 Evi1_MA0029.1 JASPAR + 31339126 31339139 7.0E-06 AAGAAAGGATAAGT 14 TGIF2LX_MEIS_full_dimeric_12_1 SELEX + 31343378 31343389 3.0E-06 TGACAGCTCTCA 12 TGIF2LX_MEIS_full_dimeric_12_1 SELEX - 31343378 31343389 2.0E-06 TGAGAGCTGTCA 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX + 31343378 31343389 4.0E-06 TGACAGCTCTCA 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX - 31343378 31343389 9.0E-06 TGAGAGCTGTCA 12 CPEB1_RRM_full_monomeric_8_1 SELEX + 31339106 31339113 4.0E-06 AATAAAAA 8 ZNF524_C2H2_full_monomeric_14_1 SELEX - 31343818 31343831 1.0E-05 CTCGCACCCGCGCC 14 Sox2_MA0143.1 JASPAR - 31339119 31339133 4.0E-06 CCTTTCTTACTCAAA 15 FOXL1_MA0033.1 JASPAR + 31339224 31339231 9.0E-06 TATATATA 8 FOXL1_MA0033.1 JASPAR - 31339224 31339231 9.0E-06 TATATATA 8 TGIF1_MEIS_DBD_dimeric_12_1 SELEX + 31343378 31343389 1.0E-06 TGACAGCTCTCA 12 TGIF1_MEIS_DBD_dimeric_12_1 SELEX - 31343378 31343389 2.0E-06 TGAGAGCTGTCA 12 RREB1_MA0073.1 JASPAR - 31344883 31344902 5.0E-06 CACCAAACCACACACCCATA 20 V_MINI20_B_M00324 TRANSFAC + 31343608 31343628 4.0E-06 CGCCGGCCTCACCCCGGGGCC 21 V_TGIF_01_M00418 TRANSFAC - 31343375 31343385 7.0E-06 AGCTGTCAGGT 11 V_AR_02_M00953 TRANSFAC + 31347533 31347559 0.0E+00 TTTCCAGGCAAATTTTGTTCTTGTGTA 27 V_E2F1_Q3_01_M00938 TRANSFAC - 31343884 31343899 7.0E-06 GGGGCGCCAAAACGAC 16 V_ZFX_01_M01593 TRANSFAC + 31343394 31343409 1.0E-05 CTCCAGGCCTCGCTGG 16 V_STAT3STAT3_Q3_M01220 TRANSFAC - 31338976 31338989 4.0E-06 GTGATGGGAAACAT 14 V_IK_Q5_M01169 TRANSFAC - 31339185 31339194 3.0E-06 TTTGGGAGGC 10 V_GKLF_02_M01588 TRANSFAC - 31343405 31343416 2.0E-06 GCCCCACCCAGC 12 V_AREB6_04_M00415 TRANSFAC + 31343853 31343861 8.0E-06 CTGTTTCTT 9 V_E2A_Q2_M00804 TRANSFAC - 31339140 31339153 8.0E-06 CCAGCTGTCCCAGG 14 V_LYF1_01_M00141 TRANSFAC - 31339186 31339194 9.0E-06 TTTGGGAGG 9 V_ZFP691_03_M02833 TRANSFAC + 31343706 31343722 4.0E-06 CGCACAGTGCTCATGCG 17 V_WT1_Q6_01_M02036 TRANSFAC + 31343894 31343903 4.0E-06 CGCCCCCGCC 10 V_TST1_01_M00133 TRANSFAC + 31339102 31339116 6.0E-06 GGTGAATAAAAAGAG 15 V_ZNF219_01_M01122 TRANSFAC + 31343699 31343710 1.0E-05 CGCCCCCCGCAC 12 V_CEBPE_Q6_M01868 TRANSFAC - 31346061 31346074 4.0E-06 TATGATTGCATCAC 14 V_PR_01_M00954 TRANSFAC + 31347533 31347559 7.0E-06 TTTCCAGGCAAATTTTGTTCTTGTGTA 27 V_TEF_Q6_M00672 TRANSFAC - 31347553 31347564 9.0E-06 TTGCTTACACAA 12 V_TATA_01_M00252 TRANSFAC + 31339223 31339237 5.0E-06 CTATATATACCCAGG 15 V_CEBPD_Q6_M00621 TRANSFAC - 31346060 31346071 4.0E-06 GATTGCATCACT 12 V_CEBPB_02_M00117 TRANSFAC - 31346059 31346072 7.0E-06 TGATTGCATCACTG 14 V_RSRFC4_Q2_M00407 TRANSFAC - 31339219 31339235 7.0E-06 TGGGTATATATAGGCTC 17 V_BCL6_Q3_M01171 TRANSFAC + 31344788 31344797 1.0E-06 GTTTCTAGGT 10 V_PAX6_Q2_M00979 TRANSFAC + 31343644 31343657 5.0E-06 CGGAGCTGGAAGTC 14 V_GR_01_M00955 TRANSFAC + 31347533 31347559 1.0E-06 TTTCCAGGCAAATTTTGTTCTTGTGTA 27 V_PPARG_03_M00528 TRANSFAC + 31339076 31339092 9.0E-06 AGCCAGGCCATAGTTTA 17 V_MUSCLE_INI_B_M00321 TRANSFAC + 31343608 31343628 6.0E-06 CGCCGGCCTCACCCCGGGGCC 21 V_GRE_C_M00205 TRANSFAC - 31344632 31344647 9.0E-06 GGCTCAAGGAGTCCTC 16 V_CTCF_01_M01200 TRANSFAC + 31343623 31343642 1.0E-05 GGGGCCGGCAGGGGGCGAAG 20 V_MINI19_B_M00323 TRANSFAC + 31343608 31343628 1.0E-06 CGCCGGCCTCACCCCGGGGCC 21 V_GFI1_Q6_M01067 TRANSFAC - 31338965 31338977 5.0E-06 ATAAATCAGTTCT 13 V_CPHX_01_M01478 TRANSFAC - 31346060 31346073 1.0E-06 ATGATTGCATCACT 14 V_CPHX_01_M01478 TRANSFAC + 31346061 31346074 1.0E-06 GTGATGCAATCATA 14 V_RSRFC4_01_M00026 TRANSFAC + 31339220 31339235 6.0E-06 AGCCTATATATACCCA 16 V_SOX2_01_M02246 TRANSFAC - 31339119 31339133 4.0E-06 CCTTTCTTACTCAAA 15 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 31344891 31344898 1.0E-05 TGTGGTTT 8 V_SIX6_08_M02897 TRANSFAC + 31339220 31339236 3.0E-06 AGCCTATATATACCCAG 17 V_HOXB3_01_M01330 TRANSFAC + 31339038 31339054 2.0E-06 TGACCTCATTACTTCTT 17 V_PR_02_M00957 TRANSFAC + 31347533 31347559 0.0E+00 TTTCCAGGCAAATTTTGTTCTTGTGTA 27 V_MEF2A_05_M01301 TRANSFAC - 31339223 31339234 5.0E-06 GGGTATATATAG 12 V_SOX5_04_M02910 TRANSFAC - 31338967 31338981 7.0E-06 AAACATAAATCAGTT 15 V_ARID5A_04_M02840 TRANSFAC + 31339054 31339070 1.0E-05 TGTTAAATAAGGGACAA 17 V_PAX4_04_M00380 TRANSFAC - 31344881 31344910 0.0E+00 GGAAAATACACCAAACCACACACCCATACC 30 V_PPARA_01_M00242 TRANSFAC + 31339073 31339092 1.0E-06 ATGAGCCAGGCCATAGTTTA 20 V_NANOG_02_M01247 TRANSFAC + 31339119 31339138 1.0E-06 TTTGAGTAAGAAAGGATAAG 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.