Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

GALNTL5 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 168391 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5 chr7 + 151648463 - 151653963 151653463 Transcription Factor Binding Sites   Download all TFBS in the GALNTL5 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX - 151652301 151652309 2.0E-06 CTAATAAAA 9 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX - 151652300 151652309 9.0E-06 CTAATAAAAT 10 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 151652816 151652833 1.0E-06 AGAATTAAAAGGCAATCA 18 Foxk1_forkhead_DBD_putatively-multimeric_11_1 SELEX - 151652602 151652612 7.0E-06 CAGACACAATG 11 Tp53_p53l_DBD_dimeric_18_1 SELEX + 151652373 151652390 4.0E-06 GCAAGTCCTCAGACATGC 18 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 151652303 151652319 1.0E-05 TTATTAGAAAAGGGTTA 17 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 151652817 151652833 4.0E-06 GAATTAAAAGGCAATCA 17 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 151652828 151652844 5.0E-06 CAATCAAATAACCCTTT 17 Arx_homeodomain_DBD_dimeric_13_1 SELEX + 151652297 151652309 4.0E-06 ATAATTTTATTAG 13 Arx_homeodomain_DBD_dimeric_13_1 SELEX - 151652297 151652309 2.0E-06 CTAATAAAATTAT 13 Foxj3_forkhead_DBD_putatively-multimeric_11_1 SELEX - 151652603 151652613 1.0E-06 ACAGACACAAT 11 IRF8_IRF_full_dimeric_14_1 SELEX - 151652567 151652580 3.0E-06 TAGATACTGAAACT 14 Alx1_homeodomain_DBD_dimeric_13_1 SELEX + 151652297 151652309 4.0E-06 ATAATTTTATTAG 13 Alx1_homeodomain_DBD_dimeric_13_1 SELEX - 151652297 151652309 2.0E-06 CTAATAAAATTAT 13 ISX_homeodomain_DBD_dimeric_13_1 SELEX + 151652297 151652309 7.0E-06 ATAATTTTATTAG 13 ZNF524_C2H2_full_dimeric_12_1 SELEX - 151652314 151652325 3.0E-06 ACCCTCTAACCC 12 FOXK1_forkhead_DBD_putatively-multimeric_10_1 SELEX - 151652603 151652612 8.0E-06 CAGACACAAT 10 PROP1_homeodomain_full_dimeric_11_1 SELEX + 151652298 151652308 2.0E-06 TAATTTTATTA 11 PROP1_homeodomain_full_dimeric_11_1 SELEX - 151652298 151652308 1.0E-06 TAATAAAATTA 11 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 151652301 151652310 9.0E-06 TCTAATAAAA 10 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX - 151652301 151652309 7.0E-06 CTAATAAAA 9 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX - 151652300 151652309 2.0E-06 CTAATAAAAT 10 ALX3_homeodomain_full_dimeric_13_1 SELEX + 151652297 151652309 4.0E-06 ATAATTTTATTAG 13 ALX3_homeodomain_full_dimeric_13_1 SELEX - 151652297 151652309 2.0E-06 CTAATAAAATTAT 13 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 151652812 151652825 5.0E-06 GTAAAGAATTAAAA 14 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX + 151652785 151652800 1.0E-06 TGACATCTAAATGTTG 16 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 151652785 151652800 6.0E-06 CAACATTTAGATGTCA 16 FOXG1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 151652602 151652613 2.0E-06 ACAGACACAATG 12 DRGX_homeodomain_DBD_dimeric_13_1 SELEX + 151652297 151652309 2.0E-06 ATAATTTTATTAG 13 DRGX_homeodomain_DBD_dimeric_13_1 SELEX - 151652297 151652309 2.0E-06 CTAATAAAATTAT 13 PHOX2B_homeodomain_full_dimeric_11_1 SELEX + 151652298 151652308 4.0E-06 TAATTTTATTA 11 PHOX2B_homeodomain_full_dimeric_11_1 SELEX - 151652298 151652308 6.0E-06 TAATAAAATTA 11 Alx4_homeodomain_DBD_dimeric_13_1 SELEX + 151652297 151652309 3.0E-06 ATAATTTTATTAG 13 Alx4_homeodomain_DBD_dimeric_13_1 SELEX - 151652297 151652309 1.0E-06 CTAATAAAATTAT 13 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 151652181 151652190 7.0E-06 CCAATAAATA 10 HOXA13_homeodomain_full_monomeric_10_1 SELEX - 151652300 151652309 2.0E-06 CTAATAAAAT 10 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 151652816 151652833 1.0E-06 AGAATTAAAAGGCAATCA 18 PRRX1_homeodomain_full_dimeric_11_1 SELEX + 151652298 151652308 6.0E-06 TAATTTTATTA 11 CART1_homeodomain_DBD_dimeric_13_1 SELEX + 151652297 151652309 2.0E-06 ATAATTTTATTAG 13 CART1_homeodomain_DBD_dimeric_13_1 SELEX - 151652297 151652309 8.0E-06 CTAATAAAATTAT 13 Uncx_homeodomain_DBD_dimeric_13_1 SELEX + 151652297 151652309 2.0E-06 ATAATTTTATTAG 13 MTF1_C2H2_DBD_monomeric_14_1 SELEX - 151652419 151652432 0.0E+00 TTTGCACACAGCAC 14 PPARG_MA0066.1 JASPAR - 151652585 151652604 4.0E-06 ATGGGCAATCGTGACCTCCT 20 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 151652181 151652190 8.0E-06 CCAATAAATA 10 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX - 151652300 151652309 2.0E-06 CTAATAAAAT 10 IRF4_IRF_full_dimeric_15_1 SELEX - 151652566 151652580 7.0E-06 TAGATACTGAAACTG 15 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX + 151652298 151652308 3.0E-06 TAATTTTATTA 11 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX - 151652298 151652308 6.0E-06 TAATAAAATTA 11 IRF5_IRF_full_dimeric_14_1 SELEX - 151652567 151652580 8.0E-06 TAGATACTGAAACT 14 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 151652816 151652833 2.0E-06 AGAATTAAAAGGCAATCA 18 ELF5_MA0136.1 JASPAR - 151652291 151652299 2.0E-06 TATTTCCTT 9 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 151652300 151652310 9.0E-06 TCTAATAAAAT 11 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 151652178 151652190 3.0E-06 AAGCCAATAAATA 13 CDX2_homeodomain_DBD_monomeric_9_1 SELEX - 151652301 151652309 9.0E-06 CTAATAAAA 9 RARA_nuclearreceptor_full_dimeric_15_1 SELEX - 151652772 151652786 9.0E-06 CAGTACACAAGTTCA 15 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX + 151652181 151652190 6.0E-06 CCAATAAATA 10 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX - 151652300 151652309 2.0E-06 CTAATAAAAT 10 V_NFAT_Q4_01_M00935 TRANSFAC + 151652465 151652474 9.0E-06 GTGGAAATTC 10 V_HOXA9_01_M01351 TRANSFAC - 151652296 151652312 6.0E-06 TTTCTAATAAAATTATT 17 V_STAT5A_Q6_M01890 TRANSFAC - 151652303 151652315 6.0E-06 CCTTTTCTAATAA 13 V_AR_02_M00953 TRANSFAC + 151652867 151652893 9.0E-06 TGTTTTCTGAAAGCTTGTTCTTTTTCT 27 V_SMAD3_Q6_01_M01888 TRANSFAC - 151652603 151652615 0.0E+00 GGACAGACACAAT 13 V_MTF1_Q4_M00650 TRANSFAC - 151652419 151652432 0.0E+00 TTTGCACACAGCAC 14 V_BCL6_01_M01183 TRANSFAC - 151652297 151652312 6.0E-06 TTTCTAATAAAATTAT 16 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 151652752 151652763 6.0E-06 AAATTTCACAAG 12 V_PROP1_01_M01294 TRANSFAC + 151652298 151652308 0.0E+00 TAATTTTATTA 11 V_PROP1_01_M01294 TRANSFAC - 151652298 151652308 2.0E-06 TAATAAAATTA 11 V_HOXD13_01_M01404 TRANSFAC - 151652297 151652312 0.0E+00 TTTCTAATAAAATTAT 16 V_HOXC13_01_M01317 TRANSFAC - 151652298 151652313 2.0E-06 TTTTCTAATAAAATTA 16 V_STAT4_Q4_M01666 TRANSFAC + 151652205 151652218 1.0E-06 TTCAGAGAAAAGAA 14 V_LXRB_RXRA_Q5_M02021 TRANSFAC + 151652586 151652600 6.0E-06 GGAGGTCACGATTGC 15 V_SRF_C_M00215 TRANSFAC - 151652515 151652529 4.0E-06 ACCCAATATGGCCAA 15 V_ELF4_04_M02850 TRANSFAC - 151652296 151652312 4.0E-06 TTTCTAATAAAATTATT 17 V_HELIOSA_02_M01004 TRANSFAC + 151652289 151652299 1.0E-05 TTAAGGAAATA 11 V_PR_01_M00954 TRANSFAC + 151652867 151652893 2.0E-06 TGTTTTCTGAAAGCTTGTTCTTTTTCT 27 V_HOXB13_01_M01467 TRANSFAC + 151652178 151652193 5.0E-06 AAGCCAATAAATACTA 16 V_HOXB13_01_M01467 TRANSFAC - 151652297 151652312 1.0E-06 TTTCTAATAAAATTAT 16 V_POLY_C_M00212 TRANSFAC - 151652291 151652308 1.0E-06 TAATAAAATTATTTCCTT 18 V_XFD3_01_M00269 TRANSFAC + 151652809 151652822 9.0E-06 AGAGTAAAGAATTA 14 V_STAT5A_02_M00460 TRANSFAC - 151652288 151652311 2.0E-06 TTCTAATAAAATTATTTCCTTAAA 24 V_ELF5_01_M01197 TRANSFAC + 151652289 151652299 1.0E-06 TTAAGGAAATA 11 V_HFH1_01_M00129 TRANSFAC + 151652893 151652904 5.0E-06 TTAAGTTTATTT 12 V_STAT4_Q5_M02117 TRANSFAC + 151652303 151652312 6.0E-06 TTATTAGAAA 10 V_KAISO_01_M01119 TRANSFAC - 151652337 151652346 4.0E-06 CTCCTGCTAA 10 V_HBP1_04_M02866 TRANSFAC + 151652596 151652612 8.0E-06 ATTGCCCATTGTGTCTG 17 V_FXR_IR1_Q6_M00767 TRANSFAC + 151652156 151652168 2.0E-06 AGGTCACTGACCC 13 V_ATF1_Q6_M00691 TRANSFAC + 151652082 151652092 8.0E-06 CTTGGACGTCA 11 V_MTF1_06_M02882 TRANSFAC - 151652885 151652898 1.0E-06 ACTTAAGAAAAAGA 14 V_TAL1_01_M01591 TRANSFAC - 151652208 151652220 2.0E-06 TTTTCTTTTCTCT 13 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 151652320 151652328 8.0E-06 GAGGGTGGG 9 V_PARP_Q3_M01211 TRANSFAC - 151652886 151652895 3.0E-06 TAAGAAAAAG 10 V_TCF7_04_M02921 TRANSFAC + 151652301 151652315 4.0E-06 TTTTATTAGAAAAGG 15 V_LMX1B_01_M01363 TRANSFAC - 151652298 151652314 9.0E-06 CTTTTCTAATAAAATTA 17 V_STAT1STAT1_Q3_M01212 TRANSFAC - 151652301 151652313 8.0E-06 TTTTCTAATAAAA 13 V_IRF1_Q6_01_M01881 TRANSFAC + 151652566 151652579 8.0E-06 CAGTTTCAGTATCT 14 V_SRF_02_M01257 TRANSFAC - 151652513 151652530 4.0E-06 GACCCAATATGGCCAACT 18 V_FOXJ2_01_M00422 TRANSFAC + 151652178 151652195 4.0E-06 AAGCCAATAAATACTAAG 18 V_HOXD8_01_M01432 TRANSFAC - 151652178 151652194 3.0E-06 TTAGTATTTATTGGCTT 17 V_GATA5_03_M02756 TRANSFAC - 151652547 151652563 6.0E-06 ACAAGTGATAACAAAAC 17 V_ELF5_04_M02241 TRANSFAC - 151652291 151652299 2.0E-06 TATTTCCTT 9 V_BRN3C_01_M01408 TRANSFAC - 151652086 151652101 2.0E-06 GGGCATTAATGACGTC 16 V_HOXA10_01_M01464 TRANSFAC - 151652297 151652312 1.0E-06 TTTCTAATAAAATTAT 16 V_HOXA10_01_M01464 TRANSFAC - 151652893 151652908 7.0E-06 TTTGAAATAAACTTAA 16 V_GATA6_04_M02757 TRANSFAC - 151652547 151652563 6.0E-06 ACAAGTGATAACAAAAC 17 V_HOXD10_01_M01375 TRANSFAC - 151652296 151652312 0.0E+00 TTTCTAATAAAATTATT 17 V_GLIS2_04_M02863 TRANSFAC + 151652302 151652315 3.0E-06 TTTATTAGAAAAGG 14 V_ARID5A_04_M02840 TRANSFAC + 151652446 151652462 9.0E-06 CAGTTAATACGAAACAT 17 V_STAT1_05_M01260 TRANSFAC + 151652202 151652223 4.0E-06 GGTTTCAGAGAAAAGAAAAGCT 22 V_STAT1_05_M01260 TRANSFAC + 151652300 151652321 4.0E-06 ATTTTATTAGAAAAGGGTTAGA 22 V_NANOG_02_M01247 TRANSFAC - 151652882 151652901 4.0E-06 TAAACTTAAGAAAAAGAACA 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.