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CCDC138 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 165055 coiled-coil domain containing 138 chr2 + 109398218 - 109403718 109403218 Transcription Factor Binding Sites   Download all TFBS in the CCDC138 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 109401788 109401800 6.0E-06 GTAAACATATGTA 13 SOX21_HMG_DBD_dimeric_15_1 SELEX + 109403668 109403682 2.0E-06 AACAATTGAATTGCT 15 SOX21_HMG_DBD_dimeric_15_1 SELEX - 109403668 109403682 1.0E-06 AGCAATTCAATTGTT 15 SOX4_HMG_DBD_dimeric_16_1 SELEX + 109403667 109403682 1.0E-06 AAACAATTGAATTGCT 16 SOX4_HMG_DBD_dimeric_16_1 SELEX - 109403668 109403683 2.0E-06 AAGCAATTCAATTGTT 16 SRY_HMG_DBD_dimeric_15_1 SELEX + 109403668 109403682 3.0E-06 AACAATTGAATTGCT 15 SRY_HMG_DBD_dimeric_15_1 SELEX - 109403668 109403682 2.0E-06 AGCAATTCAATTGTT 15 SOX2_HMG_full_dimeric_17_1 SELEX + 109403667 109403683 2.0E-06 AAACAATTGAATTGCTT 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 109401784 109401800 6.0E-06 GTAAACATATGTAATCC 17 POU3F2_POU_DBD_monomeric_13_1 SELEX + 109401905 109401917 9.0E-06 TTAGAATAAATTC 13 SOX8_HMG_full_dimeric_15_1 SELEX + 109403668 109403682 9.0E-06 AACAATTGAATTGCT 15 SOX8_HMG_full_dimeric_15_1 SELEX - 109403668 109403682 4.0E-06 AGCAATTCAATTGTT 15 SOX8_HMG_full_dimeric_17_1 SELEX + 109403667 109403683 5.0E-06 AAACAATTGAATTGCTT 17 Sox17_HMG_DBD_dimeric_15_1 SELEX + 109403668 109403682 0.0E+00 AACAATTGAATTGCT 15 Sox17_HMG_DBD_dimeric_15_1 SELEX - 109403668 109403682 0.0E+00 AGCAATTCAATTGTT 15 Pax4_MA0068.1 JASPAR - 109403646 109403675 1.0E-06 CAATTGTTTTCACAACTCCACTCACATCAC 30 OTX2_homeodomain_DBD_dimeric_15_1 SELEX - 109403686 109403700 6.0E-06 AATAAGCCGCTTTTA 15 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX - 109401787 109401798 3.0E-06 AAACATATGTAA 12 SP1_MA0079.2 JASPAR - 109403180 109403189 7.0E-06 CCCCGCCCCC 10 POU2F3_POU_DBD_dimeric_12_1 SELEX - 109401787 109401798 9.0E-06 AAACATATGTAA 12 SRY_MA0084.1 JASPAR + 109403665 109403673 9.0E-06 GAAAACAAT 9 OLIG1_bHLH_DBD_dimeric_10_1 SELEX - 109401788 109401797 1.0E-05 AACATATGTA 10 Otx1_homeodomain_DBD_dimeric_15_1 SELEX - 109403686 109403700 6.0E-06 AATAAGCCGCTTTTA 15 SP4_C2H2_full_monomeric_17_1 SELEX - 109403177 109403193 5.0E-06 CAGACCCCGCCCCCCCG 17 SOX18_HMG_full_dimeric_15_1 SELEX + 109403668 109403682 1.0E-06 AACAATTGAATTGCT 15 SOX18_HMG_full_dimeric_15_1 SELEX - 109403668 109403682 0.0E+00 AGCAATTCAATTGTT 15 SOX15_HMG_full_dimeric_15_1 SELEX + 109403668 109403682 2.0E-06 AACAATTGAATTGCT 15 SOX15_HMG_full_dimeric_15_1 SELEX - 109403668 109403682 7.0E-06 AGCAATTCAATTGTT 15 SP1_C2H2_DBD_monomeric_11_1 SELEX - 109403180 109403190 4.0E-06 ACCCCGCCCCC 11 SOX7_HMG_full_dimeric_17_1 SELEX + 109403667 109403683 1.0E-06 AAACAATTGAATTGCTT 17 SOX7_HMG_full_dimeric_17_1 SELEX - 109403667 109403683 1.0E-06 AAGCAATTCAATTGTTT 17 SOX14_HMG_DBD_dimeric_12_1 SELEX + 109403669 109403680 4.0E-06 ACAATTGAATTG 12 Atoh1_bHLH_DBD_dimeric_10_1 SELEX - 109401788 109401797 6.0E-06 AACATATGTA 10 Myf_MA0055.1 JASPAR - 109403403 109403414 7.0E-06 CAGCAGCAGGAG 12 HOXA13_homeodomain_full_monomeric_11_1 SELEX - 109401936 109401946 1.0E-05 TCTCTTAAAAA 11 Sox11_HMG_DBD_dimeric_15_1 SELEX + 109403668 109403682 1.0E-06 AACAATTGAATTGCT 15 Sox11_HMG_DBD_dimeric_15_1 SELEX - 109403668 109403682 3.0E-06 AGCAATTCAATTGTT 15 Sox3_HMG_DBD_dimeric_17_1 SELEX + 109403667 109403683 0.0E+00 AAACAATTGAATTGCTT 17 Sox3_HMG_DBD_dimeric_17_1 SELEX - 109403667 109403683 0.0E+00 AAGCAATTCAATTGTTT 17 Sox1_HMG_DBD_dimeric_15_1 SELEX + 109403668 109403682 2.0E-06 AACAATTGAATTGCT 15 Sox1_HMG_DBD_dimeric_15_1 SELEX - 109403668 109403682 6.0E-06 AGCAATTCAATTGTT 15 FOXO6_forkhead_DBD_dimeric_14_1 SELEX + 109401787 109401800 4.0E-06 TTACATATGTTTAC 14 BHLHA15_bHLH_DBD_dimeric_10_1 SELEX - 109401788 109401797 1.0E-05 AACATATGTA 10 TBX1_TBX_DBD_dimeric_20_1 SELEX + 109403609 109403628 6.0E-06 TGGTGTTGGAGAAAGTGCTA 20 SOX9_HMG_full_dimeric_17_1 SELEX + 109403667 109403683 2.0E-06 AAACAATTGAATTGCTT 17 SOX9_HMG_full_dimeric_17_1 SELEX - 109403667 109403683 2.0E-06 AAGCAATTCAATTGTTT 17 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 109401787 109401800 3.0E-06 TTACATATGTTTAC 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 109401787 109401800 4.0E-06 GTAAACATATGTAA 14 V_DMRT4_01_M01149 TRANSFAC + 109401758 109401770 2.0E-06 AATGTATCAGTTC 13 V_OBOX6_01_M01445 TRANSFAC + 109403687 109403701 5.0E-06 AAAAGCGGCTTATTT 15 V_APOLYA_B_M00310 TRANSFAC + 109403672 109403686 7.0E-06 ATTGAATTGCTTTTT 15 V_DMRT3_01_M01148 TRANSFAC - 109401756 109401770 5.0E-06 GAACTGATACATTTG 15 V_MYB_03_M02883 TRANSFAC - 109402874 109402889 4.0E-06 TTGCTAACTGCCATAT 16 V_SOX30_03_M02804 TRANSFAC + 109403664 109403679 1.0E-06 TGAAAACAATTGAATT 16 V_BCL6_01_M01183 TRANSFAC + 109403627 109403642 3.0E-06 TATTCAGCTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC + 109403697 109403712 8.0E-06 TATTTCGAAATAATTT 16 V_HOXA13_02_M01297 TRANSFAC + 109401742 109401750 3.0E-06 AAATAAACC 9 V_MAFB_03_M02879 TRANSFAC - 109403635 109403649 4.0E-06 TCACTGCAAAAAAAA 15 V_SP1_Q6_01_M00931 TRANSFAC - 109403140 109403149 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 109403181 109403190 7.0E-06 GGGGCGGGGT 10 V_NR2F2_03_M02783 TRANSFAC + 109402884 109402899 3.0E-06 TAGCAAAGGTCACTTC 16 V_MEIS1AHOXA9_01_M00420 TRANSFAC + 109402946 109402959 1.0E-05 TAACAGGTTAAATG 14 V_SRY_02_M00160 TRANSFAC + 109403665 109403676 2.0E-06 GAAAACAATTGA 12 V_FOXO3A_Q1_M01137 TRANSFAC + 109403664 109403675 8.0E-06 TGAAAACAATTG 12 V_POU3F2_02_M00464 TRANSFAC + 109401918 109401927 9.0E-06 TTAAGTTAAT 10 V_SOX11_04_M02899 TRANSFAC - 109403700 109403713 8.0E-06 GAAATTATTTCGAA 14 V_AP2_Q6_01_M00915 TRANSFAC - 109403446 109403458 2.0E-06 GCGCCCCCAGGCC 13 V_FOXJ1_03_M02750 TRANSFAC - 109401788 109401803 1.0E-06 AGTGTAAACATATGTA 16 V_SP1_03_M02281 TRANSFAC - 109403180 109403189 7.0E-06 CCCCGCCCCC 10 V_TR4_Q2_M01725 TRANSFAC - 109402887 109402897 4.0E-06 AGTGACCTTTG 11 V_SP1_02_M01303 TRANSFAC + 109403181 109403191 8.0E-06 GGGGCGGGGTC 11 V_COUPTF_Q6_M01036 TRANSFAC - 109402878 109402900 7.0E-06 AGAAGTGACCTTTGCTAACTGCC 23 V_TCFAP2E_04_M02926 TRANSFAC + 109401736 109401749 7.0E-06 TACTTGAAATAAAC 14 V_TCFAP2E_04_M02926 TRANSFAC - 109403635 109403648 2.0E-06 CACTGCAAAAAAAA 14 V_BARBIE_01_M00238 TRANSFAC - 109403627 109403641 5.0E-06 AAAAAAAGCTGAATA 15 V_RPC155_01_M01798 TRANSFAC - 109401771 109401786 4.0E-06 TCCATGGTTCAAGACT 16 V_SOX13_03_M02797 TRANSFAC + 109403663 109403678 9.0E-06 GTGAAAACAATTGAAT 16 V_GC_01_M00255 TRANSFAC - 109403143 109403156 6.0E-06 AAAGGGCGGGGCGG 14 V_GC_01_M00255 TRANSFAC + 109403179 109403192 8.0E-06 GGGGGGCGGGGTCT 14 V_SOX7_03_M02807 TRANSFAC + 109403661 109403682 1.0E-06 TTGTGAAAACAATTGAATTGCT 22 V_MYF_01_M01302 TRANSFAC - 109403403 109403414 7.0E-06 CAGCAGCAGGAG 12 V_TEF_Q6_M00672 TRANSFAC - 109403661 109403672 8.0E-06 TTGTTTTCACAA 12 Ddit3_Cebpa_MA0019.1 JASPAR + 109403050 109403061 2.0E-06 AGATGCAATACT 12 V_SP1_Q6_M00196 TRANSFAC - 109403139 109403151 7.0E-06 GCGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC + 109403179 109403191 1.0E-06 GGGGGGCGGGGTC 13 V_SOX18_03_M02801 TRANSFAC - 109403662 109403677 0.0E+00 TTCAATTGTTTTCACA 16 V_OCT1_04_M00138 TRANSFAC - 109401897 109401919 3.0E-06 AAGAATTTATTCTAAAATCATGA 23 V_MEF2_04_M00233 TRANSFAC + 109401731 109401752 8.0E-06 CCAGATACTTGAAATAAACCTA 22 V_MEF2_04_M00233 TRANSFAC + 109402750 109402771 9.0E-06 TATGTTACCCAAGATAGATGTA 22 V_MUSCLE_INI_B_M00321 TRANSFAC + 109402829 109402849 9.0E-06 GCGCGCCACCACTCCCGGCTC 21 V_HNF4A_Q6_01_M02016 TRANSFAC + 109402884 109402898 8.0E-06 TAGCAAAGGTCACTT 15 V_SP1_01_M00008 TRANSFAC + 109403181 109403190 3.0E-06 GGGGCGGGGT 10 V_NR1B1_Q6_M02110 TRANSFAC + 109402888 109402897 6.0E-06 AAAGGTCACT 10 V_SOX9_B1_M00410 TRANSFAC + 109403664 109403677 3.0E-06 TGAAAACAATTGAA 14 V_BLIMP1_Q6_M01066 TRANSFAC - 109403150 109403165 8.0E-06 GCGGCAGGGAAAGGGC 16 V_GATA4_Q3_M00632 TRANSFAC - 109402866 109402877 7.0E-06 ATATAAAAGAAA 12 V_SP4_Q5_M01273 TRANSFAC + 109403140 109403150 2.0E-06 GCCCCGCCCCG 11 V_SOX15_03_M02799 TRANSFAC + 109403663 109403679 1.0E-06 GTGAAAACAATTGAATT 17 V_MTF1_06_M02882 TRANSFAC - 109402862 109402875 6.0E-06 ATAAAAGAAAAACC 14 V_HAND1E47_01_M00222 TRANSFAC - 109401727 109401742 4.0E-06 TCAAGTATCTGGCTTT 16 V_SOX21_04_M02907 TRANSFAC - 109403662 109403678 9.0E-06 ATTCAATTGTTTTCACA 17 V_IRX2_01_M01405 TRANSFAC + 109402760 109402776 8.0E-06 AAGATAGATGTAACTCT 17 V_RARA_03_M02787 TRANSFAC + 109402884 109402899 1.0E-06 TAGCAAAGGTCACTTC 16 V_SOX8_03_M02808 TRANSFAC - 109403663 109403679 5.0E-06 AATTCAATTGTTTTCAC 17 V_SRF_06_M02916 TRANSFAC - 109402860 109402876 5.0E-06 TATAAAAGAAAAACCAA 17 V_SRF_06_M02916 TRANSFAC - 109402861 109402877 6.0E-06 ATATAAAAGAAAAACCA 17 V_ERR1_Q2_01_M02093 TRANSFAC + 109402888 109402898 1.0E-05 AAAGGTCACTT 11 V_SOX1_03_M02802 TRANSFAC + 109403667 109403682 6.0E-06 AAACAATTGAATTGCT 16 V_SOX1_03_M02802 TRANSFAC - 109403668 109403683 0.0E+00 AAGCAATTCAATTGTT 16 V_PAX4_02_M00377 TRANSFAC + 109403704 109403714 6.0E-06 AAATAATTTCG 11 V_SOX12_03_M02796 TRANSFAC - 109403662 109403675 4.0E-06 CAATTGTTTTCACA 14 V_SRY_05_M02917 TRANSFAC + 109403662 109403678 1.0E-05 TGTGAAAACAATTGAAT 17 V_SP1_Q2_01_M00933 TRANSFAC - 109403180 109403189 4.0E-06 CCCCGCCCCC 10 V_SP1_Q4_01_M00932 TRANSFAC - 109403144 109403156 5.0E-06 AAAGGGCGGGGCG 13 V_SP1_Q4_01_M00932 TRANSFAC + 109403179 109403191 3.0E-06 GGGGGGCGGGGTC 13 V_OBOX6_02_M03068 TRANSFAC + 109403687 109403701 5.0E-06 AAAAGCGGCTTATTT 15 V_PAX4_04_M00380 TRANSFAC - 109403605 109403634 1.0E-05 GCTGAATAGCACTTTCTCCAACACCACACC 30 V_NKX21_01_M01312 TRANSFAC + 109401731 109401746 8.0E-06 CCAGATACTTGAAATA 16 V_OCT4_01_M01125 TRANSFAC + 109401913 109401927 9.0E-06 AATTCTTAAGTTAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.