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LGI4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 163175 leucine-rich repeat LGI family, member 4 chr19 - 35625678 - 35631178 35626178 Transcription Factor Binding Sites   Download all TFBS in the LGI4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 35626456 35626474 0.0E+00 TGACCACCAGAGGGAGCAG 19 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX + 35630285 35630296 6.0E-06 TGAAAGATGTCA 12 Zfp652_C2H2_DBD_monomeric_13_1 SELEX - 35626532 35626544 3.0E-06 CTAGAGGGTTAAT 13 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 35628409 35628425 8.0E-06 ATACACAAGCAGAAACA 17 FOXO3_MA0157.1 JASPAR - 35630093 35630100 7.0E-06 TGTAAACA 8 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX + 35630362 35630373 3.0E-06 ACCTTTCCCACA 12 Pknox2_MEIS_DBD_dimeric_12_1 SELEX + 35630285 35630296 6.0E-06 TGAAAGATGTCA 12 Pknox2_MEIS_DBD_dimeric_12_1 SELEX - 35630285 35630296 8.0E-06 TGACATCTTTCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 35630285 35630296 4.0E-06 TGAAAGATGTCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 35630285 35630296 5.0E-06 TGACATCTTTCA 12 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX - 35626584 35626597 0.0E+00 TTCATCATCATCAT 14 Tcfcp2l1_MA0145.1 JASPAR + 35630109 35630122 4.0E-06 CCTGCTCCAACCAG 14 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 35630285 35630296 4.0E-06 TGACATCTTTCA 12 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX + 35629722 35629737 7.0E-06 GGGTCCAAAGTGCTCA 16 CTCF_C2H2_full_monomeric_17_1 SELEX + 35626457 35626473 4.0E-06 TGCTCCCTCTGGTGGTC 17 ZSCAN4_C2H2_full_monomeric_15_1 SELEX - 35625950 35625964 4.0E-06 CACACACACTCACAT 15 RFX5_RFX_DBD_dimeric_16_3 SELEX - 35630454 35630469 5.0E-06 GGCCACCATGGCAACA 16 TGIF2LX_MEIS_full_dimeric_12_1 SELEX + 35630285 35630296 5.0E-06 TGAAAGATGTCA 12 Myf_MA0055.1 JASPAR - 35629639 35629650 9.0E-06 AACCAGCAGCTG 12 PPARG_MA0066.1 JASPAR - 35629794 35629813 9.0E-06 GTGGGGGACGCTCACCCCAA 20 Meis2_MEIS_DBD_dimeric_12_1 SELEX + 35630285 35630296 1.0E-05 TGAAAGATGTCA 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX - 35630285 35630296 8.0E-06 TGACATCTTTCA 12 NR3C1_MA0113.1 JASPAR + 35626362 35626379 3.0E-06 GGGGACATCCCGTCCTGG 18 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 35627970 35627982 1.0E-06 AAACAAACAAAAA 13 TBX1_TBX_DBD_dimeric_20_1 SELEX + 35628340 35628359 6.0E-06 GGGTGTGAACCAGTGTGTGT 20 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 35629877 35629887 1.0E-05 AGCCCGAGGCT 11 TGIF1_MEIS_DBD_dimeric_12_1 SELEX + 35630285 35630296 7.0E-06 TGAAAGATGTCA 12 TGIF1_MEIS_DBD_dimeric_12_1 SELEX - 35630285 35630296 4.0E-06 TGACATCTTTCA 12 V_NFAT_Q4_01_M00935 TRANSFAC - 35628059 35628068 7.0E-06 ATGGAAAAAT 10 V_MEQ_01_M02049 TRANSFAC - 35628354 35628362 7.0E-06 AACACACAC 9 V_MEQ_01_M02049 TRANSFAC - 35629459 35629467 7.0E-06 AACACACAC 9 V_MEQ_01_M02049 TRANSFAC - 35630221 35630229 4.0E-06 AAAACACAT 9 V_FOXP1_01_M00987 TRANSFAC - 35627966 35627985 3.0E-06 CATTTTTTGTTTGTTTGTTT 20 V_FOXP1_01_M00987 TRANSFAC + 35630189 35630208 5.0E-06 GTGTGTGTGTGTGTGTGTAT 20 V_FREAC7_01_M00293 TRANSFAC + 35627967 35627982 6.0E-06 AACAAACAAACAAAAA 16 V_GEN_INI_B_M00315 TRANSFAC - 35628083 35628090 1.0E-05 CCTCATTT 8 V_TCFE2A_04_M02927 TRANSFAC + 35626305 35626321 7.0E-06 GGGACCAGATGGCTCTG 17 V_FOXO3_02_M02270 TRANSFAC - 35630093 35630100 7.0E-06 TGTAAACA 8 V_SMAD3_Q6_01_M01888 TRANSFAC - 35628439 35628451 5.0E-06 ACACAGACAGATT 13 V_ZFX_01_M01593 TRANSFAC + 35629821 35629836 3.0E-06 CTCCAGGCCTCACCCC 16 V_EOMES_03_M02747 TRANSFAC + 35628336 35628352 8.0E-06 CATAGGGTGTGAACCAG 17 V_RFX4_03_M02789 TRANSFAC - 35630452 35630466 8.0E-06 CACCATGGCAACAGC 15 V_HNF3_Q6_01_M01012 TRANSFAC - 35627966 35627983 0.0E+00 TTTTTTGTTTGTTTGTTT 18 V_HNF3_Q6_01_M01012 TRANSFAC - 35627970 35627987 5.0E-06 TTCATTTTTTGTTTGTTT 18 V_FOXJ1_03_M02750 TRANSFAC + 35627969 35627984 4.0E-06 CAAACAAACAAAAAAT 16 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 35626292 35626307 4.0E-06 TGTCACCAGGGTGGGG 16 V_GM497_04_M02864 TRANSFAC - 35625952 35625967 4.0E-06 ACACACACACACTCAC 16 V_GM497_04_M02864 TRANSFAC - 35629455 35629470 3.0E-06 ACAAACACACACGCCT 16 V_NFAT2_01_M01748 TRANSFAC - 35628060 35628068 3.0E-06 ATGGAAAAA 9 V_NR3C1_01_M02219 TRANSFAC + 35626362 35626379 3.0E-06 GGGGACATCCCGTCCTGG 18 V_LDSPOLYA_B_M00317 TRANSFAC + 35630220 35630235 9.0E-06 CATGTGTTTTCTATCT 16 V_MEF2A_Q6_M02024 TRANSFAC + 35630506 35630515 8.0E-06 TATTTATACC 10 V_PPARGRXRA_01_M02262 TRANSFAC - 35630360 35630374 1.0E-06 CTGTGGGAAAGGTCA 15 V_TAL1_Q6_M00993 TRANSFAC + 35626451 35626460 3.0E-06 TCCAGCTGCT 10 V_GEN_INI3_B_M00314 TRANSFAC - 35628083 35628090 1.0E-05 CCTCATTT 8 V_HELIOSA_02_M01004 TRANSFAC - 35628060 35628070 2.0E-06 AAATGGAAAAA 11 V_HELIOSA_02_M01004 TRANSFAC - 35630321 35630331 6.0E-06 AAAAGGAAAAG 11 V_POU3F2_01_M00463 TRANSFAC + 35627983 35627996 2.0E-06 ATGAAGTTAATCAT 14 V_MYF_01_M01302 TRANSFAC - 35629639 35629650 9.0E-06 AACCAGCAGCTG 12 V_ZFP105_03_M02827 TRANSFAC + 35627971 35627985 0.0E+00 AACAAACAAAAAATG 15 V_NFAT_Q6_M00302 TRANSFAC - 35628059 35628070 1.0E-06 AAATGGAAAAAT 12 V_KROX_Q6_M00982 TRANSFAC + 35626390 35626403 8.0E-06 CCAGCCCCCTCCCC 14 V_IRF3_Q3_M01279 TRANSFAC + 35630318 35630330 4.0E-06 TGTCTTTTCCTTT 13 V_NKX25_Q5_M01043 TRANSFAC - 35630494 35630503 6.0E-06 TCCCACTTCA 10 V_YY1_Q6_02_M01035 TRANSFAC + 35628061 35628071 7.0E-06 TTTTCCATTTT 11 V_EVI1_Q3_M02002 TRANSFAC + 35625988 35625996 6.0E-06 TTTCTTGTC 9 V_ZIC3_05_M02941 TRANSFAC + 35629745 35629759 3.0E-06 GGGCACAGCAGGACG 15 V_RREB1_01_M00257 TRANSFAC - 35629459 35629472 6.0E-06 ACACAAACACACAC 14 V_RREB1_01_M00257 TRANSFAC - 35629661 35629674 3.0E-06 CCCCACCCCACCCA 14 V_CTCF_02_M01259 TRANSFAC - 35626458 35626477 0.0E+00 GTATGACCACCAGAGGGAGC 20 V_SOX11_03_M02795 TRANSFAC + 35627970 35627986 5.0E-06 AAACAAACAAAAAATGA 17 V_CTCF_01_M01200 TRANSFAC - 35626456 35626475 0.0E+00 ATGACCACCAGAGGGAGCAG 20 V_TAL1BETAITF2_01_M00070 TRANSFAC + 35626305 35626320 4.0E-06 GGGACCAGATGGCTCT 16 V_TFIII_Q6_M00706 TRANSFAC + 35629907 35629915 6.0E-06 AGAGGGAGG 9 V_NEUROD_02_M01288 TRANSFAC - 35629747 35629758 6.0E-06 GTCCTGCTGTGC 12 V_TBP_01_M00471 TRANSFAC - 35630506 35630513 4.0E-06 TATAAATA 8 V_FAC1_01_M00456 TRANSFAC + 35627974 35627987 6.0E-06 AAACAAAAAATGAA 14 V_TAL1_01_M01591 TRANSFAC + 35630323 35630335 7.0E-06 TTTCCTTTTCTCG 13 V_OSR2_04_M02889 TRANSFAC - 35625905 35625920 8.0E-06 GACAGCTACCTAAAGC 16 V_GEN_INI2_B_M00313 TRANSFAC - 35628083 35628090 1.0E-05 CCTCATTT 8 V_XBP1_01_M00251 TRANSFAC - 35628038 35628054 2.0E-06 AAGATCACGTGTATAAT 17 V_FPM315_01_M01587 TRANSFAC + 35626274 35626285 3.0E-06 GGGGGAGCAGGA 12 V_SREBP_Q3_M00776 TRANSFAC - 35629795 35629806 6.0E-06 ACGCTCACCCCA 12 V_FOXJ2_01_M00422 TRANSFAC + 35627966 35627983 0.0E+00 AAACAAACAAACAAAAAA 18 V_VDR_Q3_M00444 TRANSFAC + 35630491 35630505 3.0E-06 GGGTGAAGTGGGAGA 15 V_ERR1_Q2_01_M02093 TRANSFAC - 35630357 35630367 8.0E-06 AAAGGTCACCC 11 V_HNF1A_Q5_M02013 TRANSFAC + 35627987 35627997 3.0E-06 AGTTAATCATA 11 V_EKLF_Q5_M01874 TRANSFAC - 35626298 35626307 9.0E-06 CCCCACCCTG 10 V_EKLF_Q5_M01874 TRANSFAC - 35629996 35630005 2.0E-06 CCACACCCTG 10 V_YY1_01_M00059 TRANSFAC - 35627975 35627991 2.0E-06 TAACTTCATTTTTTGTT 17 V_PPARG_02_M00515 TRANSFAC - 35629793 35629815 5.0E-06 GAGTGGGGGACGCTCACCCCAAT 23 V_MEF2_01_M00006 TRANSFAC + 35626525 35626540 7.0E-06 CCCTGAAATTAACCCT 16 V_HMEF2_Q6_M00406 TRANSFAC + 35626525 35626540 1.0E-05 CCCTGAAATTAACCCT 16 V_LTF_Q6_M01692 TRANSFAC + 35630262 35630270 1.0E-05 GTCACTTGC 9 V_TCF3_05_M02920 TRANSFAC + 35627970 35627984 1.0E-05 AAACAAACAAAAAAT 15 V_AR_Q2_M00447 TRANSFAC + 35630133 35630147 2.0E-06 AGAGGTTGTTGTTCA 15 V_RFX1_02_M00281 TRANSFAC - 35630453 35630470 6.0E-06 AGGCCACCATGGCAACAG 18 PPARG_RXRA_MA0065.2 JASPAR - 35630360 35630374 1.0E-06 CTGTGGGAAAGGTCA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.