Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SLC35G1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 159371 solute carrier family 35, member G1 chr10 + 95648729 - 95654229 95653729 Transcription Factor Binding Sites   Download all TFBS in the SLC35G1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 95657650 95657667 4.0E-06 AAGTTAAATATAGATTTG 18 Sox1_HMG_DBD_dimeric_14_1 SELEX + 95657774 95657787 4.0E-06 TGAATATTTATCCA 14 Sox1_HMG_DBD_dimeric_14_1 SELEX - 95657774 95657787 4.0E-06 TGGATAAATATTCA 14 SOX10_HMG_full_dimeric_14_1 SELEX - 95657770 95657783 3.0E-06 TAAATATTCAGTGA 14 POU2F1_POU_DBD_dimeric_14_1 SELEX + 95657772 95657785 5.0E-06 ACTGAATATTTATC 14 POU2F1_POU_DBD_dimeric_14_1 SELEX - 95657772 95657785 6.0E-06 GATAAATATTCAGT 14 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 95657650 95657666 3.0E-06 AAGTTAAATATAGATTT 17 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 95657894 95657910 7.0E-06 CAATTATAACCCATTTT 17 Arx_homeodomain_DBD_dimeric_13_1 SELEX + 95657888 95657900 8.0E-06 ATAACCCAATTAT 13 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 95657869 95657885 6.0E-06 ATAATCAACAGATAACT 17 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 95657652 95657663 8.0E-06 GTTAAATATAGA 12 ZNF232_C2H2_full_monomeric_19_1 SELEX + 95657650 95657668 2.0E-06 AAGTTAAATATAGATTTGA 19 Alx1_homeodomain_DBD_dimeric_13_1 SELEX + 95657888 95657900 3.0E-06 ATAACCCAATTAT 13 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 95657652 95657663 5.0E-06 GTTAAATATAGA 12 SOX8_HMG_DBD_dimeric_14_1 SELEX - 95657770 95657783 1.0E-06 TAAATATTCAGTGA 14 ISX_homeodomain_DBD_dimeric_13_1 SELEX + 95657888 95657900 2.0E-06 ATAACCCAATTAT 13 BARHL2_homeodomain_full_dimeric_16_1 SELEX - 95657894 95657909 8.0E-06 AAATGGGTTATAATTG 16 TEAD1_TEA_full_monomeric_10_1 SELEX + 95654794 95654803 7.0E-06 CACATTCCTC 10 PROP1_homeodomain_full_dimeric_11_1 SELEX + 95657889 95657899 1.0E-06 TAACCCAATTA 11 MEF2A_MA0052.1 JASPAR - 95657653 95657662 7.0E-06 CTATATTTAA 10 Hoxa2_homeodomain_DBD_monomeric_10_1 SELEX - 95654219 95654228 6.0E-06 ACTAATTACA 10 ALX3_homeodomain_full_dimeric_13_1 SELEX + 95657888 95657900 2.0E-06 ATAACCCAATTAT 13 HOXA5_MA0158.1 JASPAR - 95654222 95654229 7.0E-06 CACTAATT 8 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX + 95657862 95657875 0.0E+00 AAGTCAAATAATCA 14 POU2F3_POU_DBD_dimeric_12_1 SELEX + 95657773 95657784 4.0E-06 CTGAATATTTAT 12 POU2F3_POU_DBD_dimeric_12_1 SELEX - 95657773 95657784 2.0E-06 ATAAATATTCAG 12 DRGX_homeodomain_DBD_dimeric_13_1 SELEX + 95657888 95657900 1.0E-06 ATAACCCAATTAT 13 PHOX2B_homeodomain_full_dimeric_11_1 SELEX + 95657889 95657899 1.0E-06 TAACCCAATTA 11 Alx4_homeodomain_DBD_dimeric_13_1 SELEX + 95657888 95657900 3.0E-06 ATAACCCAATTAT 13 SOX9_HMG_full_dimeric_16_3 SELEX - 95657769 95657784 2.0E-06 ATAAATATTCAGTGAA 16 Lhx3_MA0135.1 JASPAR - 95657647 95657659 9.0E-06 TATTTAACTTTTC 13 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 95657893 95657910 5.0E-06 CCAATTATAACCCATTTT 18 PRRX1_homeodomain_full_dimeric_11_1 SELEX + 95657889 95657899 2.0E-06 TAACCCAATTA 11 CART1_homeodomain_DBD_dimeric_13_1 SELEX + 95657888 95657900 1.0E-06 ATAACCCAATTAT 13 Uncx_homeodomain_DBD_dimeric_13_1 SELEX + 95657888 95657900 8.0E-06 ATAACCCAATTAT 13 POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 95657773 95657784 5.0E-06 CTGAATATTTAT 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 95657773 95657784 3.0E-06 ATAAATATTCAG 12 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX + 95657889 95657899 1.0E-06 TAACCCAATTA 11 GSX1_homeodomain_DBD_monomeric_10_1 SELEX - 95654219 95654228 6.0E-06 ACTAATTACA 10 TEAD4_TEA_DBD_monomeric_10_1 SELEX + 95654794 95654803 9.0E-06 CACATTCCTC 10 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX + 95653626 95653640 3.0E-06 CAGGTTAAGAGGCCA 15 POU3F3_POU_DBD_dimeric_12_1 SELEX - 95657773 95657784 6.0E-06 ATAAATATTCAG 12 NRF1_NRF_full_dimeric_12_1 SELEX + 95653689 95653700 0.0E+00 CGCGCATGCGCA 12 NRF1_NRF_full_dimeric_12_1 SELEX - 95653689 95653700 1.0E-06 TGCGCATGCGCG 12 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 95657893 95657910 3.0E-06 CCAATTATAACCCATTTT 18 TEAD1_MA0090.1 JASPAR + 95654794 95654805 1.0E-06 CACATTCCTCTT 12 ZNF784_C2H2_full_monomeric_10_1 SELEX - 95653916 95653925 9.0E-06 GCACCTACCG 10 V_FOXP1_01_M00987 TRANSFAC - 95657641 95657660 3.0E-06 ATATTTAACTTTTCATGCTT 20 V_CDP_03_M01342 TRANSFAC - 95657865 95657881 8.0E-06 ATCTGTTGATTATTTGA 17 V_FOXP3_Q4_M00992 TRANSFAC + 95657978 95657994 8.0E-06 AAGGATTTTTTACTTGC 17 V_AR_02_M00953 TRANSFAC - 95657912 95657938 1.0E-05 GCTTTATGAAGAAAGTGTTCTTTTCTG 27 V_YY1_02_M00069 TRANSFAC + 95653533 95653552 2.0E-06 GCTGGGCCATGTAGCCTGAA 20 V_NF1_Q6_01_M00806 TRANSFAC - 95658032 95658048 5.0E-06 TAGAACGCTTGCCAAGA 17 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 95657868 95657879 0.0E+00 AATAATCAACAG 12 V_PROP1_01_M01294 TRANSFAC - 95657889 95657899 7.0E-06 TAATTGGGTTA 11 V_GABP_B_M00341 TRANSFAC + 95653716 95653727 5.0E-06 GCCGGAAGAGCG 12 V_MEF2_02_M00231 TRANSFAC + 95657646 95657667 2.0E-06 TGAAAAGTTAAATATAGATTTG 22 V_YY1_Q6_M00793 TRANSFAC + 95657993 95658001 7.0E-06 GCCATCTTG 9 V_HNF3_Q6_01_M01012 TRANSFAC + 95657773 95657790 8.0E-06 CTGAATATTTATCCAGTG 18 V_MAF_Q6_M00648 TRANSFAC - 95657918 95657933 8.0E-06 ATGAAGAAAGTGTTCT 16 V_CUX1_03_M02958 TRANSFAC - 95657865 95657881 8.0E-06 ATCTGTTGATTATTTGA 17 V_AP2_Q6_M00189 TRANSFAC - 95654022 95654033 5.0E-06 AACCCGCCGGCG 12 V_AP4_Q6_02_M01860 TRANSFAC + 95653580 95653592 0.0E+00 CCAGCTGTGGGCA 13 V_OCT2_02_M01761 TRANSFAC + 95657774 95657783 4.0E-06 TGAATATTTA 10 V_AR_03_M00956 TRANSFAC - 95657912 95657938 1.0E-06 GCTTTATGAAGAAAGTGTTCTTTTCTG 27 V_HNF1_C_M00206 TRANSFAC + 95657863 95657879 2.0E-06 AGTCAAATAATCAACAG 17 V_COMP1_01_M00057 TRANSFAC + 95657661 95657684 2.0E-06 AGATTTGATTAACAGTTCAAAATA 24 V_PR_01_M00954 TRANSFAC - 95657912 95657938 1.0E-06 GCTTTATGAAGAAAGTGTTCTTTTCTG 27 V_OCT1_02_M00136 TRANSFAC - 95657770 95657784 5.0E-06 ATAAATATTCAGTGA 15 V_ZBP89_Q4_M01816 TRANSFAC - 95653664 95653673 4.0E-06 CCCTCCCCCA 10 V_RSRFC4_Q2_M00407 TRANSFAC + 95657650 95657666 0.0E+00 AAGTTAAATATAGATTT 17 V_IRC900814_04_M02870 TRANSFAC + 95657627 95657642 2.0E-06 AAGATAAGTCGTGAAA 16 V_GSH2_01_M01326 TRANSFAC - 95654215 95654230 9.0E-06 ACACTAATTACAGGAG 16 V_MEF2_03_M00232 TRANSFAC + 95657646 95657667 3.0E-06 TGAAAAGTTAAATATAGATTTG 22 V_OCT1_04_M00138 TRANSFAC + 95657637 95657659 7.0E-06 GTGAAAGCATGAAAAGTTAAATA 23 V_GR_01_M00955 TRANSFAC - 95657912 95657938 0.0E+00 GCTTTATGAAGAAAGTGTTCTTTTCTG 27 V_HBP1_03_M02762 TRANSFAC - 95657761 95657776 2.0E-06 TCAGTGAATGAAAGAT 16 V_GR_Q6_M00192 TRANSFAC - 95657916 95657934 1.0E-06 TATGAAGAAAGTGTTCTTT 19 V_MUSCLE_INI_B_M00321 TRANSFAC + 95653862 95653882 2.0E-06 CCCGGGCGCCACTGAGGAGCC 21 V_TEF_01_M01305 TRANSFAC + 95654794 95654805 1.0E-06 CACATTCCTCTT 12 V_HOXA5_03_M02271 TRANSFAC - 95654222 95654229 7.0E-06 CACTAATT 8 V_MEF2_Q6_01_M00941 TRANSFAC - 95657653 95657664 2.0E-06 ATCTATATTTAA 12 V_GATA5_04_M02860 TRANSFAC + 95657960 95657976 1.0E-06 GCGTAAGATATCACTTG 17 V_ARID3A_04_M02735 TRANSFAC - 95657660 95657676 8.0E-06 ACTGTTAATCAAATCTA 17 V_SP3_Q3_M00665 TRANSFAC + 95657848 95657861 3.0E-06 AGACTTGTGGGAGG 14 V_MINI19_B_M00323 TRANSFAC + 95653862 95653882 7.0E-06 CCCGGGCGCCACTGAGGAGCC 21 V_AP4_01_M00005 TRANSFAC + 95653576 95653593 8.0E-06 AGAGCCAGCTGTGGGCAC 18 V_MRG2_01_M01395 TRANSFAC - 95657996 95658011 5.0E-06 AAACACTTGTCAAGAT 16 V_TEF1_Q6_03_M01817 TRANSFAC - 95654795 95654803 3.0E-06 GAGGAATGT 9 V_IPF1_01_M01233 TRANSFAC - 95654220 95654229 1.0E-06 CACTAATTAC 10 V_ZFP206_01_M01742 TRANSFAC + 95653689 95653699 2.0E-06 CGCGCATGCGC 11 V_ZFP206_01_M01742 TRANSFAC - 95653690 95653700 0.0E+00 TGCGCATGCGC 11 V_NRF1_Q6_M00652 TRANSFAC - 95653689 95653698 4.0E-06 CGCATGCGCG 10 V_NRF1_Q6_M00652 TRANSFAC + 95653691 95653700 2.0E-06 CGCATGCGCA 10 V_RSRFC4_01_M00026 TRANSFAC + 95657650 95657665 3.0E-06 AAGTTAAATATAGATT 16 V_RSRFC4_01_M00026 TRANSFAC - 95657650 95657665 0.0E+00 AATCTATATTTAACTT 16 V_BBX_03_M02739 TRANSFAC + 95657766 95657780 2.0E-06 TCATTCACTGAATAT 15 V_BBX_03_M02739 TRANSFAC - 95657766 95657780 5.0E-06 ATATTCAGTGAATGA 15 V_TITF1_Q3_M00432 TRANSFAC - 95657732 95657741 7.0E-06 ACTCAAGAGT 10 V_IPF1_Q4_01_M01013 TRANSFAC + 95654217 95654231 7.0E-06 CCTGTAATTAGTGTC 15 V_PR_02_M00957 TRANSFAC - 95657912 95657938 6.0E-06 GCTTTATGAAGAAAGTGTTCTTTTCTG 27 V_HMEF2_Q6_M00406 TRANSFAC - 95657649 95657664 4.0E-06 ATCTATATTTAACTTT 16 V_TCF3_05_M02920 TRANSFAC - 95657982 95657996 8.0E-06 TGGCAAGTAAAAAAT 15 V_IPF1_03_M01235 TRANSFAC - 95654220 95654229 2.0E-06 CACTAATTAC 10 V_STAT1_Q6_M01823 TRANSFAC - 95657743 95657752 8.0E-06 TTCAGGGAAA 10 V_STAT1_05_M01260 TRANSFAC - 95657898 95657919 4.0E-06 CTTTTCTGGAAAATGGGTTATA 22 V_NF1_Q6_M00193 TRANSFAC + 95658032 95658049 5.0E-06 TCTTGGCAAGCGTTCTAC 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.