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RHOXF1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 158800 Rhox homeobox family, member 1 chrX - 119249347 - 119254847 119249847 RHOXF1_homeodomain_full_dimeric_9_1 RHOXF1_homeodomain_full_monomeric_8_1 Transcription Factor Binding Sites   Download all TFBS in the RHOXF1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 119254312 119254329 0.0E+00 AGTGTAAACATTAACATT 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 119254312 119254329 2.0E-06 AATGTTAATGTTTACACT 18 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 119254315 119254327 0.0E+00 GTAAACATTAACA 13 SOX21_HMG_DBD_dimeric_15_1 SELEX - 119254318 119254332 2.0E-06 AAGAATGTTAATGTT 15 Foxa2_MA0047.2 JASPAR - 119254310 119254321 2.0E-06 TGTTTACACTGC 12 POU2F1_POU_DBD_dimeric_14_1 SELEX - 119245722 119245735 7.0E-06 TATACAAATTCAAC 14 SRY_HMG_DBD_dimeric_15_1 SELEX + 119254318 119254332 1.0E-06 AACATTAACATTCTT 15 FOXA1_MA0148.1 JASPAR - 119254311 119254321 1.0E-06 TGTTTACACTG 11 SOX2_HMG_full_dimeric_17_1 SELEX + 119254317 119254333 2.0E-06 AAACATTAACATTCTTG 17 SOX9_HMG_full_dimeric_16_1 SELEX - 119254216 119254231 7.0E-06 CACAAGCTTAAGTGTT 16 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 119254312 119254323 5.0E-06 AGTGTAAACATT 12 FOXO3_MA0157.1 JASPAR + 119254314 119254321 7.0E-06 TGTAAACA 8 FOXD1_MA0031.1 JASPAR + 119254315 119254322 7.0E-06 GTAAACAT 8 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 119254312 119254322 5.0E-06 AGTGTAAACAT 11 SOX8_HMG_full_dimeric_15_1 SELEX - 119254318 119254332 7.0E-06 AAGAATGTTAATGTT 15 Sox17_HMG_DBD_dimeric_15_1 SELEX + 119254318 119254332 6.0E-06 AACATTAACATTCTT 15 RUNX3_RUNX_DBD_dimeric_16_1 SELEX + 119254455 119254470 4.0E-06 TTACCGCAGATCGCAG 16 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 119254314 119254327 4.0E-06 TGTAAACATTAACA 14 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 119254314 119254327 1.0E-06 TGTTAATGTTTACA 14 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 119254314 119254327 5.0E-06 TGTAAACATTAACA 14 FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 119254314 119254327 0.0E+00 TGTTAATGTTTACA 14 RUNX2_RUNX_DBD_dimeric_16_1 SELEX + 119254455 119254470 5.0E-06 TTACCGCAGATCGCAG 16 POU2F3_POU_DBD_dimeric_12_1 SELEX - 119245723 119245734 9.0E-06 ATACAAATTCAA 12 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 119254314 119254327 2.0E-06 TGTAAACATTAACA 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 119254314 119254327 1.0E-06 TGTTAATGTTTACA 14 SOX15_HMG_full_dimeric_15_1 SELEX + 119254318 119254332 1.0E-06 AACATTAACATTCTT 15 SOX7_HMG_full_dimeric_17_1 SELEX + 119254317 119254333 9.0E-06 AAACATTAACATTCTTG 17 SOX7_HMG_full_dimeric_17_1 SELEX - 119254317 119254333 6.0E-06 CAAGAATGTTAATGTTT 17 Foxd3_MA0041.1 JASPAR + 119245831 119245842 8.0E-06 TTTTGTTTGCTT 12 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 119254314 119254327 1.0E-06 TGTAAACATTAACA 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 119254314 119254327 1.0E-06 TGTTAATGTTTACA 14 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 119245723 119245734 9.0E-06 ATACAAATTCAA 12 FOXB1_forkhead_full_monomeric_9_1 SELEX + 119254314 119254322 3.0E-06 TGTAAACAT 9 Sox3_HMG_DBD_dimeric_17_1 SELEX + 119254317 119254333 2.0E-06 AAACATTAACATTCTTG 17 Sox3_HMG_DBD_dimeric_17_1 SELEX - 119254317 119254333 3.0E-06 CAAGAATGTTAATGTTT 17 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 119254315 119254327 1.0E-06 GTAAACATTAACA 13 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 119254312 119254322 4.0E-06 AGTGTAAACAT 11 HNF1A_MA0046.1 JASPAR - 119254314 119254327 1.0E-06 TGTTAATGTTTACA 14 SOX9_HMG_full_dimeric_17_1 SELEX - 119254317 119254333 4.0E-06 CAAGAATGTTAATGTTT 17 V_NFAT_Q4_01_M00935 TRANSFAC - 119245855 119245864 1.0E-06 TTGGAAAATT 10 V_HNF3B_01_M00131 TRANSFAC - 119254312 119254326 9.0E-06 GTTAATGTTTACACT 15 V_FOXO3_02_M02270 TRANSFAC + 119254314 119254321 7.0E-06 TGTAAACA 8 V_HNF1_02_M01379 TRANSFAC + 119245797 119245813 8.0E-06 TCTTGGTCAACTGAAAT 17 V_FOXD3_01_M00130 TRANSFAC + 119245831 119245842 9.0E-06 TTTTGTTTGCTT 12 V_NKX29_01_M01352 TRANSFAC - 119254229 119254245 4.0E-06 TTACAAGTACTCTACAC 17 V_NKX29_01_M01352 TRANSFAC + 119254230 119254246 2.0E-06 TGTAGAGTACTTGTAAC 17 V_NKX29_01_M01352 TRANSFAC + 119254399 119254415 4.0E-06 TTTGGAGTACTTGGACT 17 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 119245847 119245858 8.0E-06 AATTGTCTAAAG 12 V_ZTA_Q2_M00711 TRANSFAC + 119245818 119245830 5.0E-06 TCAATATTACTCA 13 V_HNF4_Q6_M00967 TRANSFAC - 119254409 119254417 2.0E-06 AAAGTCCAA 9 V_CEBP_01_M00159 TRANSFAC - 119245855 119245867 9.0E-06 GCTTTGGAAAATT 13 V_SOX11_04_M02899 TRANSFAC - 119245847 119245860 3.0E-06 AAAATTGTCTAAAG 14 V_FOXJ1_03_M02750 TRANSFAC + 119254312 119254327 6.0E-06 AGTGTAAACATTAACA 16 V_HFH4_01_M00742 TRANSFAC + 119245723 119245735 6.0E-06 TTGAATTTGTATA 13 V_ZFP105_03_M02827 TRANSFAC - 119245827 119245841 3.0E-06 AGCAAACAAAATGAG 15 V_FOXO1_02_M00474 TRANSFAC - 119254312 119254325 5.0E-06 TTAATGTTTACACT 14 V_ARID5A_03_M02736 TRANSFAC - 119245814 119245827 3.0E-06 GTAATATTGAATTC 14 V_NFAT_Q6_M00302 TRANSFAC - 119245855 119245866 4.0E-06 CTTTGGAAAATT 12 V_XFD3_01_M00269 TRANSFAC + 119254312 119254325 0.0E+00 AGTGTAAACATTAA 14 V_HNF3A_01_M01261 TRANSFAC - 119245833 119245842 7.0E-06 AAGCAAACAA 10 V_HNF3A_01_M01261 TRANSFAC + 119254313 119254322 3.0E-06 GTGTAAACAT 10 V_NKX52_01_M01315 TRANSFAC + 119245690 119245706 4.0E-06 ACAGTCACTTAAACATT 17 V_MEF2_04_M00233 TRANSFAC - 119245755 119245776 8.0E-06 AAATATGGTCAAAATAGGCTTT 22 V_XFD2_01_M00268 TRANSFAC + 119254312 119254325 2.0E-06 AGTGTAAACATTAA 14 V_NCX_02_M01420 TRANSFAC + 119245699 119245715 5.0E-06 TAAACATTTAGTAGTTT 17 V_HNF4A_02_M02868 TRANSFAC - 119254406 119254421 2.0E-06 GAGAAAAGTCCAAGTA 16 V_KAISO_01_M01119 TRANSFAC - 119254194 119254203 7.0E-06 CTCCTGCTAT 10 V_FREAC2_01_M00290 TRANSFAC + 119254310 119254325 3.0E-06 GCAGTGTAAACATTAA 16 V_IPF1_05_M01255 TRANSFAC + 119254317 119254328 2.0E-06 AAACATTAACAT 12 V_OCT2_01_M01368 TRANSFAC - 119245723 119245738 7.0E-06 TACTATACAAATTCAA 16 V_HNF1_01_M00132 TRANSFAC - 119254313 119254327 0.0E+00 TGTTAATGTTTACAC 15 V_ZSCAN4_04_M02942 TRANSFAC - 119245829 119245844 5.0E-06 TGAAGCAAACAAAATG 16 V_NKX3A_02_M01383 TRANSFAC - 119254229 119254245 1.0E-05 TTACAAGTACTCTACAC 17 V_NKX3A_02_M01383 TRANSFAC - 119254398 119254414 1.0E-05 GTCCAAGTACTCCAAAA 17 V_FOXA2_03_M02260 TRANSFAC - 119254310 119254321 2.0E-06 TGTTTACACTGC 12 V_FOX_Q2_M00809 TRANSFAC - 119245863 119245875 7.0E-06 GTTTGTATGCTTT 13 V_SOX18_04_M02905 TRANSFAC + 119245720 119245735 5.0E-06 ATGTTGAATTTGTATA 16 V_SOX18_04_M02905 TRANSFAC + 119245809 119245824 6.0E-06 GAAATGAATTCAATAT 16 V_SOX18_04_M02905 TRANSFAC - 119245809 119245824 0.0E+00 ATATTGAATTCATTTC 16 V_HNF1A_Q5_M02013 TRANSFAC - 119254317 119254327 3.0E-06 TGTTAATGTTT 11 V_SOX1_03_M02802 TRANSFAC - 119245807 119245822 3.0E-06 ATTGAATTCATTTCAG 16 V_SOX1_03_M02802 TRANSFAC + 119245811 119245826 0.0E+00 AATGAATTCAATATTA 16 V_HNF3B_Q6_M02014 TRANSFAC + 119245833 119245841 6.0E-06 TTGTTTGCT 9 V_PIT1_Q6_M00802 TRANSFAC + 119245815 119245832 5.0E-06 AATTCAATATTACTCATT 18 V_FREAC4_01_M00292 TRANSFAC + 119254310 119254325 1.0E-06 GCAGTGTAAACATTAA 16 V_HMX3_02_M01413 TRANSFAC + 119245690 119245706 4.0E-06 ACAGTCACTTAAACATT 17 V_MAFK_04_M02880 TRANSFAC - 119254428 119254442 7.0E-06 ACAAGAAGTGCAACG 15 V_HNF1A_01_M02162 TRANSFAC - 119254314 119254327 1.0E-06 TGTTAATGTTTACA 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.