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C9orf66 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 157983 chromosome 9 open reading frame 66 chr9 - 215393 - 220893 215893 Transcription Factor Binding Sites   Download all TFBS in the C9orf66 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints PAX6_PAX_DBD_monomeric_19_1 SELEX + 214875 214893 5.0E-06 GTTTGCGCTTGGCTGGGCA 19 SPIC_ETS_full_monomeric_14_1 SELEX + 214838 214851 2.0E-06 GAAATGCGGAAGTT 14 LHX6_homeodomain_full_dimeric_16_1 SELEX + 216997 217012 6.0E-06 CAAGTAGAGTTGATCA 16 CEBPD_bZIP_DBD_dimeric_10_1 SELEX + 211779 211788 8.0E-06 ATTACACAAT 10 FOXL1_forkhead_full_dimeric_13_1 SELEX + 215628 215640 8.0E-06 CTTAAATAAACCA 13 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 220022 220030 6.0E-06 TATTCAAAT 9 POU2F3_POU_DBD_monomeric_9_1 SELEX + 220022 220030 6.0E-06 TATTCAAAT 9 EBF1_MA0154.1 JASPAR - 214516 214525 5.0E-06 ACCCCAGGGA 10 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX - 215928 215940 7.0E-06 AGCCCTGTGGGCA 13 SCRT2_C2H2_DBD_monomeric_13_1 SELEX + 215021 215033 5.0E-06 GATCAACAGGTAA 13 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 220022 220030 4.0E-06 TATTCAAAT 9 NR2F1_MA0017.1 JASPAR - 211692 211705 5.0E-06 TGAACTTTAGAAAT 14 TFAP2C_TFAP_full_dimeric_13_1 SELEX + 215928 215940 9.0E-06 TGCCCACAGGGCT 13 TFAP2C_TFAP_full_dimeric_13_1 SELEX - 215928 215940 7.0E-06 AGCCCTGTGGGCA 13 SPIB_ETS_DBD_monomeric_14_1 SELEX + 214838 214851 0.0E+00 GAAATGCGGAAGTT 14 RARG_nuclearreceptor_full_dimeric_18_1 SELEX - 215648 215665 5.0E-06 AATGTCAGCCACAGGCCA 18 T_MA0009.1 JASPAR - 214496 214506 3.0E-06 CTAGGTGTTAT 11 CEBPB_bZIP_full_dimeric_10_1 SELEX + 211779 211788 7.0E-06 ATTACACAAT 10 TCF4_bHLH_full_dimeric_10_1 SELEX + 219632 219641 3.0E-06 CACACCTGTA 10 OTX2_homeodomain_DBD_monomeric_8_1 SELEX - 217040 217047 7.0E-06 TTAATCCT 8 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX + 217057 217072 0.0E+00 AGGTACAAAGTCCGAA 16 ZIC3_C2H2_full_monomeric_15_1 SELEX + 215036 215050 4.0E-06 CGCCCCCCGCGGCGC 15 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 215629 215639 1.0E-05 TTAAATAAACC 11 HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX + 217057 217071 3.0E-06 AGGTACAAAGTCCGA 15 SCRT1_C2H2_DBD_monomeric_15_1 SELEX + 215021 215035 5.0E-06 GATCAACAGGTAAGA 15 HNF1B_homeodomain_full_dimeric_13_1 SELEX + 217044 217056 9.0E-06 TTAAATGAATAAT 13 PITX1_homeodomain_full_monomeric_9_1 SELEX - 217040 217048 2.0E-06 TTTAATCCT 9 Evi1_MA0029.1 JASPAR + 215881 215894 7.0E-06 GTTAAAAGATAATA 14 Hltf_MA0109.1 JASPAR - 220015 220024 6.0E-06 ATACATATAT 10 FOXI1_forkhead_full_dimeric_17_1 SELEX - 217087 217103 2.0E-06 ATGTGTATGTTACACAT 17 HLF_MA0043.1 JASPAR + 211778 211789 1.0E-06 GATTACACAATT 12 SPI1_ETS_full_monomeric_14_1 SELEX + 214838 214851 0.0E+00 GAAATGCGGAAGTT 14 TP53_MA0106.1 JASPAR - 214881 214900 2.0E-06 CGGAACATGCCCAGCCAAGC 20 CEBPE_bZIP_DBD_dimeric_10_1 SELEX + 211779 211788 6.0E-06 ATTACACAAT 10 ZNF524_C2H2_full_monomeric_14_1 SELEX + 219813 219826 6.0E-06 CTCGAACCCAGGAA 14 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 215627 215639 8.0E-06 ACTTAAATAAACC 13 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 215631 215643 8.0E-06 AAATAAACCAAAA 13 NFIA_NFI_full_monomeric_10_1 SELEX + 217072 217081 5.0E-06 ATTGCCAAGT 10 ZIC1_C2H2_full_monomeric_14_1 SELEX + 215036 215049 9.0E-06 CGCCCCCCGCGGCG 14 V_RUSH1A_02_M01107 TRANSFAC - 220015 220024 6.0E-06 ATACATATAT 10 V_FOXP1_01_M00987 TRANSFAC - 215617 215636 5.0E-06 TTATTTAAGTGTAGATTTTT 20 V_FOXP1_01_M00987 TRANSFAC - 220001 220020 9.0E-06 ATATATTTTTATGCTTGTAT 20 V_FOXP1_01_M00987 TRANSFAC - 220005 220024 3.0E-06 ATACATATATTTTTATGCTT 20 V_CEBPG_Q6_M00622 TRANSFAC + 219889 219901 1.0E-06 TCTATTTCAAAAA 13 RXR_RAR_DR5_MA0159.1 JASPAR + 211700 211716 8.0E-06 AGTTCAGAGAGAGGCAA 17 V_SPI1_01_M01203 TRANSFAC + 214838 214854 4.0E-06 GAAATGCGGAAGTTTCC 17 V_STAT5A_Q6_M01890 TRANSFAC + 219960 219972 3.0E-06 AGCTTTCTGAGAA 13 V_STAT5A_Q6_M01890 TRANSFAC - 219964 219976 3.0E-06 ATACTTCTCAGAA 13 V_DBX1_01_M01483 TRANSFAC + 217042 217058 7.0E-06 GATTAAATGAATAATAG 17 V_ATF_01_M00017 TRANSFAC + 211683 211696 4.0E-06 AGCTGACGTATTTC 14 V_OBOX5_05_M03066 TRANSFAC + 217036 217052 2.0E-06 GGGGAGGATTAAATGAA 17 V_CEBP_Q3_M00770 TRANSFAC - 211779 211790 8.0E-06 TAATTGTGTAAT 12 V_MTF1_Q4_M00650 TRANSFAC - 214986 214999 6.0E-06 TCTGCGCTCGGCAG 14 V_BCL6_01_M01183 TRANSFAC - 215884 215899 6.0E-06 TTTCCTATTATCTTTT 16 V_GATA3_03_M00351 TRANSFAC + 215885 215894 1.0E-06 AAAGATAATA 10 V_HOXA13_02_M01297 TRANSFAC + 215631 215639 3.0E-06 AAATAAACC 9 V_MAFB_03_M02879 TRANSFAC + 219890 219904 4.0E-06 CTATTTCAAAAAAAA 15 V_NFAT3_Q3_M01734 TRANSFAC - 211668 211677 6.0E-06 TTTTTTTCCT 10 V_POU2F3_01_M01476 TRANSFAC + 220019 220034 4.0E-06 ATGTATTCAAATGTAT 16 V_POU1F1_Q6_M00744 TRANSFAC + 217048 217057 1.0E-06 ATGAATAATA 10 V_SOX11_04_M02899 TRANSFAC - 219912 219925 1.0E-05 AAAATTATTGGGTT 14 V_ATF3_Q6_01_M01863 TRANSFAC - 211684 211694 6.0E-06 AATACGTCAGC 11 V_P53_DECAMER_Q2_M00761 TRANSFAC + 215415 215424 9.0E-06 AGGCAAGTCT 10 V_AP2_Q6_M00189 TRANSFAC - 214965 214976 7.0E-06 GGCCCGCCGGCG 12 V_HFH4_01_M00742 TRANSFAC - 215630 215642 3.0E-06 TTTGGTTTATTTA 13 V_NKX24_01_M01350 TRANSFAC - 215439 215454 2.0E-06 TCAGCCACTTCACTTC 16 V_HTF_01_M00538 TRANSFAC - 211678 211701 2.0E-06 CTTTAGAAATACGTCAGCTCTAAC 24 V_TCFAP2E_04_M02926 TRANSFAC + 219891 219904 2.0E-06 TATTTCAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 219892 219905 6.0E-06 ATTTCAAAAAAAAA 14 V_P53_02_M00272 TRANSFAC - 215415 215424 9.0E-06 AGACTTGCCT 10 V_RPC155_01_M01798 TRANSFAC + 214179 214194 5.0E-06 TCTTGAGTTTGAGGCC 16 V_ELF4_04_M02850 TRANSFAC - 215604 215620 7.0E-06 TTTTTAAAAAATCACTT 17 V_ELF4_04_M02850 TRANSFAC + 215610 215626 1.0E-06 TTTTTTAAAAAATCTAC 17 V_ELF4_04_M02850 TRANSFAC + 219892 219908 2.0E-06 ATTTCAAAAAAAAAGGA 17 V_ELF4_04_M02850 TRANSFAC + 219893 219909 1.0E-06 TTTCAAAAAAAAAGGAA 17 V_TAL1_Q6_M00993 TRANSFAC - 211716 211725 1.0E-06 TCCATCTGCT 10 V_TAL1_Q6_M00993 TRANSFAC - 214597 214606 8.0E-06 TCCATCTGCC 10 V_OBOX5_02_M01480 TRANSFAC + 217036 217052 2.0E-06 GGGGAGGATTAAATGAA 17 V_TCF3_04_M02816 TRANSFAC + 219889 219905 5.0E-06 TCTATTTCAAAAAAAAA 17 V_FOXA2_02_M02853 TRANSFAC - 215944 215958 8.0E-06 AAGATTAACAAATCG 15 V_POU3F2_01_M00463 TRANSFAC - 220011 220024 3.0E-06 ATACATATATTTTT 14 V_ZFP105_03_M02827 TRANSFAC + 219894 219908 1.0E-06 TTCAAAAAAAAAGGA 15 V_GATA3_05_M02859 TRANSFAC - 211640 211661 3.0E-06 TCCTTCAGATCTAATCACCTAC 22 V_COUP_01_M00158 TRANSFAC - 211692 211705 5.0E-06 TGAACTTTAGAAAT 14 V_HIC1_06_M02867 TRANSFAC - 219920 219935 5.0E-06 CGTTATGCCCAAAATT 16 V_NFAT_Q6_M00302 TRANSFAC + 215595 215606 4.0E-06 AAGTGGAAAAAG 12 V_NKX31_02_M02782 TRANSFAC + 215620 215636 7.0E-06 AATCTACACTTAAATAA 17 V_CEBPB_02_M00117 TRANSFAC + 211777 211790 6.0E-06 GGATTACACAATTA 14 V_HNF1_Q6_01_M01011 TRANSFAC - 215877 215897 7.0E-06 TCCTATTATCTTTTAACTAGA 21 V_OBOX2_01_M01364 TRANSFAC + 217035 217051 1.0E-06 TGGGGAGGATTAAATGA 17 V_SREBP_Q6_M01168 TRANSFAC - 214517 214531 4.0E-06 GGAATCACCCCAGGG 15 V_SFPI1_04_M02896 TRANSFAC + 219898 219911 7.0E-06 AAAAAAAAGGAACA 14 V_HOX13_01_M00023 TRANSFAC - 219906 219935 5.0E-06 CGTTATGCCCAAAATTATTGGGTTTGTTCC 30 V_OCT1_04_M00138 TRANSFAC - 219996 220018 1.0E-05 ATATTTTTATGCTTGTATTATCT 23 V_OCT1_04_M00138 TRANSFAC - 220010 220032 3.0E-06 ACATTTGAATACATATATTTTTA 23 V_OCT1_04_M00138 TRANSFAC + 220015 220037 0.0E+00 ATATATGTATTCAAATGTATAGA 23 V_HBP1_03_M02762 TRANSFAC + 217041 217056 9.0E-06 GGATTAAATGAATAAT 16 V_SPIB_01_M01204 TRANSFAC + 214838 214854 0.0E+00 GAAATGCGGAAGTTTCC 17 V_SPIB_01_M01204 TRANSFAC + 219899 219915 1.0E-06 AAAAAAAGGAACAAACC 17 V_TCF7_03_M02817 TRANSFAC + 219889 219905 4.0E-06 TCTATTTCAAAAAAAAA 17 V_PAX8_01_M00717 TRANSFAC - 215899 215913 3.0E-06 CACTTTAGAATGAGT 15 V_EBF1_01_M02267 TRANSFAC - 214516 214525 5.0E-06 ACCCCAGGGA 10 V_STAT4_Q5_M02117 TRANSFAC - 219963 219972 9.0E-06 TTCTCAGAAA 10 V_GATA5_04_M02860 TRANSFAC + 219586 219602 9.0E-06 CATAAAGATAGCATTTA 17 V_ARID3A_04_M02735 TRANSFAC + 215606 215622 9.0E-06 GTGATTTTTTAAAAAAT 17 V_TBP_06_M02814 TRANSFAC - 215607 215622 7.0E-06 ATTTTTTAAAAAATCA 16 V_IRX3_01_M01318 TRANSFAC - 220011 220027 6.0E-06 TGAATACATATATTTTT 17 V_NR1B1_Q6_M02110 TRANSFAC + 211698 211707 6.0E-06 AAAGTTCAGA 10 V_IRX5_01_M01472 TRANSFAC - 220011 220027 5.0E-06 TGAATACATATATTTTT 17 V_HNF4A_02_M02868 TRANSFAC + 217059 217074 4.0E-06 GTACAAAGTCCGAATT 16 V_LIM1_01_M01418 TRANSFAC + 217040 217056 9.0E-06 AGGATTAAATGAATAAT 17 V_PAX8_B_M00328 TRANSFAC - 215897 215914 4.0E-06 ACACTTTAGAATGAGTTT 18 V_NKX32_02_M01482 TRANSFAC + 215620 215636 4.0E-06 AATCTACACTTAAATAA 17 V_HOXD9_Q2_M01834 TRANSFAC + 220005 220014 4.0E-06 AAGCATAAAA 10 V_ELF1_Q6_M00746 TRANSFAC + 215889 215900 1.0E-05 ATAATAGGAAAC 12 V_S8_01_M00099 TRANSFAC + 211779 211794 3.0E-06 ATTACACAATTAGCAA 16 V_GFI1_Q6_M01067 TRANSFAC - 215602 215614 4.0E-06 AAAAATCACTTTT 13 V_SOX15_03_M02799 TRANSFAC + 217046 217062 8.0E-06 AAATGAATAATAGGTAC 17 V_AP3_Q6_M00690 TRANSFAC - 217107 217114 5.0E-06 TCTAAATT 8 V_NKX25_03_M01414 TRANSFAC - 215439 215454 5.0E-06 TCAGCCACTTCACTTC 16 V_EHF_06_M02745 TRANSFAC + 214838 214852 8.0E-06 GAAATGCGGAAGTTT 15 V_OBOX2_02_M03064 TRANSFAC + 217035 217051 1.0E-06 TGGGGAGGATTAAATGA 17 V_OCT2_01_M01368 TRANSFAC + 220019 220034 4.0E-06 ATGTATTCAAATGTAT 16 V_AREB6_02_M00413 TRANSFAC + 219631 219642 6.0E-06 TCACACCTGTAA 12 V_GATA3_02_M00350 TRANSFAC + 215885 215894 1.0E-06 AAAGATAATA 10 V_PITX1_01_M01484 TRANSFAC + 217035 217051 2.0E-06 TGGGGAGGATTAAATGA 17 V_PARP_Q3_M01211 TRANSFAC - 211690 211699 3.0E-06 TTAGAAATAC 10 V_TCF7_04_M02921 TRANSFAC - 215608 215622 7.0E-06 ATTTTTTAAAAAATC 15 V_TCF7_04_M02921 TRANSFAC + 215609 215623 7.0E-06 ATTTTTTAAAAAATC 15 V_GATA6_01_M00462 TRANSFAC + 215885 215894 3.0E-06 AAAGATAATA 10 V_P53_05_M01655 TRANSFAC + 214879 214898 9.0E-06 GCGCTTGGCTGGGCATGTTC 20 V_P53_04_M01652 TRANSFAC + 214879 214898 1.0E-06 GCGCTTGGCTGGGCATGTTC 20 V_P53_04_M01652 TRANSFAC - 214879 214898 2.0E-06 GAACATGCCCAGCCAAGCGC 20 V_PITX2_Q2_M00482 TRANSFAC - 211774 211784 7.0E-06 TGTAATCCCGA 11 V_FOX_Q2_M00809 TRANSFAC - 215630 215642 2.0E-06 TTTGGTTTATTTA 13 V_SREBP_Q3_M00776 TRANSFAC - 214520 214531 3.0E-06 GGAATCACCCCA 12 V_TBX5_Q5_M01044 TRANSFAC + 219630 219639 3.0E-06 CTCACACCTG 10 V_IRX2_01_M01405 TRANSFAC - 220011 220027 8.0E-06 TGAATACATATATTTTT 17 V_HSF_Q6_M00641 TRANSFAC + 215169 215181 8.0E-06 TTCCCGAGGCTGC 13 V_RXR_RAR_01_M02272 TRANSFAC + 211700 211716 8.0E-06 AGTTCAGAGAGAGGCAA 17 V_SOX8_03_M02808 TRANSFAC - 217046 217062 6.0E-06 GTACCTATTATTCATTT 17 V_DMRT2_01_M01147 TRANSFAC - 219901 219916 8.0E-06 GGGTTTGTTCCTTTTT 16 V_GATA2_03_M00349 TRANSFAC + 215885 215894 5.0E-06 AAAGATAATA 10 V_SRF_06_M02916 TRANSFAC - 215603 215619 9.0E-06 TTTTAAAAAATCACTTT 17 V_SRF_06_M02916 TRANSFAC - 215604 215620 8.0E-06 TTTTTAAAAAATCACTT 17 V_SRF_06_M02916 TRANSFAC + 219892 219908 1.0E-06 ATTTCAAAAAAAAAGGA 17 V_SRF_06_M02916 TRANSFAC + 219893 219909 0.0E+00 TTTCAAAAAAAAAGGAA 17 V_ZIC1_04_M02835 TRANSFAC - 214806 214819 6.0E-06 CACCCCGGGGGAGG 14 V_HLF_01_M00260 TRANSFAC + 211779 211788 3.0E-06 ATTACACAAT 10 V_SOX1_03_M02802 TRANSFAC - 217043 217058 3.0E-06 CTATTATTCATTTAAT 16 V_SOX15_04_M02903 TRANSFAC + 215447 215461 8.0E-06 GTGGCTGAAATTAGA 15 V_MEF2_01_M00006 TRANSFAC - 215603 215618 2.0E-06 TTTAAAAAATCACTTT 16 V_CEBP_Q2_01_M00912 TRANSFAC + 211779 211790 0.0E+00 ATTACACAATTA 12 V_CMAF_01_M01070 TRANSFAC + 211678 211696 9.0E-06 GTTAGAGCTGACGTATTTC 19 V_GATA1_02_M00126 TRANSFAC + 215883 215896 1.0E-05 TAAAAGATAATAGG 14 V_ZFP128_04_M02932 TRANSFAC - 220014 220027 7.0E-06 TGAATACATATATT 14 V_OBOX5_01_M01381 TRANSFAC + 217036 217052 1.0E-06 GGGGAGGATTAAATGAA 17 V_IRXB3_01_M01377 TRANSFAC - 220011 220027 4.0E-06 TGAATACATATATTTTT 17 V_IRXB3_01_M01377 TRANSFAC + 220012 220028 9.0E-06 AAAATATATGTATTCAA 17 V_OBOX3_02_M03065 TRANSFAC + 217035 217051 2.0E-06 TGGGGAGGATTAAATGA 17 V_SREBP1_Q5_M01173 TRANSFAC - 214517 214531 3.0E-06 GGAATCACCCCAGGG 15 V_CEBPE_01_M01772 TRANSFAC + 211779 211788 7.0E-06 ATTACACAAT 10 V_CEBPE_01_M01772 TRANSFAC - 211779 211788 4.0E-06 ATTGTGTAAT 10 V_ATATA_B_M00311 TRANSFAC - 215627 215636 4.0E-06 TTATTTAAGT 10 V_OTX1_01_M01366 TRANSFAC - 215946 215962 9.0E-06 AGTGAAGATTAACAAAT 17 V_OTX1_01_M01366 TRANSFAC + 217036 217052 5.0E-06 GGGGAGGATTAAATGAA 17 V_CEBPG_Q6_01_M01869 TRANSFAC + 211778 211789 5.0E-06 GATTACACAATT 12 V_STAT1_05_M01260 TRANSFAC + 219961 219982 8.0E-06 GCTTTCTGAGAAGTATTTGCTA 22 V_OBOX6_06_M03067 TRANSFAC - 217036 217052 1.0E-06 TTCATTTAATCCTCCCC 17 V_OBOX3_01_M01466 TRANSFAC + 217035 217051 2.0E-06 TGGGGAGGATTAAATGA 17 V_PAX4_04_M00380 TRANSFAC + 219898 219927 7.0E-06 AAAAAAAAGGAACAAACCCAATAATTTTGG 30 V_CEBPA_Q6_M01866 TRANSFAC - 211778 211790 6.0E-06 TAATTGTGTAATC 13 V_AP2_Q3_M00800 TRANSFAC + 214671 214686 4.0E-06 GGCCCCGGGCAGAGCG 16 V_NANOG_02_M01247 TRANSFAC + 219893 219912 1.0E-06 TTTCAAAAAAAAAGGAACAA 20 V_NKX21_01_M01312 TRANSFAC - 215439 215454 2.0E-06 TCAGCCACTTCACTTC 16 V_OCT4_01_M01125 TRANSFAC + 220022 220036 6.0E-06 TATTCAAATGTATAG 15

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