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VPS13B Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 157680 vacuolar protein sorting 13 homolog B (yeast) chr8 + 100020493 - 100025993 100025493 Transcription Factor Binding Sites   Download all TFBS in the VPS13B promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HSF2_HSF_DBD_trimeric_13_1 SELEX - 100024850 100024862 1.0E-05 TTCTGGTACTTTC 13 GABPA_MA0062.2 JASPAR - 100025251 100025261 0.0E+00 CCGGAAGTGGC 11 GABPA_MA0062.2 JASPAR + 100025486 100025496 0.0E+00 CCGGAAGTGGC 11 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX + 100024981 100024992 9.0E-06 TGAAATCTGTCA 12 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX - 100024981 100024992 7.0E-06 TGACAGATTTCA 12 HSF1_HSF_full_trimeric_13_1 SELEX - 100024850 100024862 9.0E-06 TTCTGGTACTTTC 13 PDX1_homeodomain_DBD_dimeric_18_1 SELEX - 100022121 100022138 7.0E-06 ATAAGTAACATCCATTAG 18 PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 100026169 100026186 1.0E-06 CTATTTAGCTGTCATTAA 18 ELF4_ETS_full_monomeric_12_1 SELEX - 100025253 100025264 4.0E-06 GATCCGGAAGTG 12 ELF4_ETS_full_monomeric_12_1 SELEX + 100025483 100025494 1.0E-06 CACCCGGAAGTG 12 EWSR1-FLI1_MA0149.1 JASPAR - 100025781 100025798 3.0E-06 CGAAGTGAGGGAGGAAGA 18 STAT1_MA0137.2 JASPAR - 100025658 100025672 9.0E-06 CGCTTCCCGGAACCC 15 Pknox2_MEIS_DBD_dimeric_12_1 SELEX + 100024981 100024992 7.0E-06 TGAAATCTGTCA 12 Pknox2_MEIS_DBD_dimeric_12_1 SELEX - 100024981 100024992 7.0E-06 TGACAGATTTCA 12 SOX15_HMG_full_dimeric_15_3 SELEX - 100022124 100022138 5.0E-06 ATAAGTAACATCCAT 15 TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 100024981 100024992 4.0E-06 TGAAATCTGTCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 100024981 100024992 6.0E-06 TGACAGATTTCA 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 100024981 100024992 8.0E-06 TGACAGATTTCA 12 ELF3_ETS_full_monomeric_13_1 SELEX + 100025483 100025495 1.0E-06 CACCCGGAAGTGG 13 HSF4_HSF_DBD_trimeric_13_1 SELEX - 100024850 100024862 4.0E-06 TTCTGGTACTTTC 13 Stat3_MA0144.1 JASPAR + 100025661 100025670 3.0E-06 TTCCGGGAAG 10 Hoxa11_homeodomain_DBD_monomeric_12_1 SELEX - 100026041 100026052 9.0E-06 GCTCATTAAAAT 12 TGIF2LX_MEIS_full_dimeric_12_1 SELEX + 100024981 100024992 5.0E-06 TGAAATCTGTCA 12 POU6F2_POU_full_monomeric_10_1 SELEX - 100026043 100026052 8.0E-06 GCTCATTAAA 10 EHF_ETS_full_monomeric_12_1 SELEX + 100025483 100025494 1.0E-06 CACCCGGAAGTG 12 HOXB13_homeodomain_DBD_monomeric_11_1 SELEX - 100026042 100026052 1.0E-05 GCTCATTAAAA 11 Myf_MA0055.1 JASPAR - 100022139 100022150 1.0E-06 AAACAACTGCTG 12 ELF5_ETS_full_monomeric_11_1 SELEX - 100025253 100025263 7.0E-06 ATCCGGAAGTG 11 ELF5_ETS_full_monomeric_11_1 SELEX + 100025484 100025494 2.0E-06 ACCCGGAAGTG 11 ELF1_ETS_full_monomeric_12_1 SELEX + 100025483 100025494 2.0E-06 CACCCGGAAGTG 12 SOX18_HMG_full_dimeric_15_3 SELEX - 100022124 100022138 6.0E-06 ATAAGTAACATCCAT 15 Meis2_MEIS_DBD_dimeric_12_1 SELEX - 100024981 100024992 7.0E-06 TGACAGATTTCA 12 ELF3_ETS_DBD_monomeric_12_1 SELEX + 100025483 100025494 1.0E-06 CACCCGGAAGTG 12 TGIF1_MEIS_DBD_dimeric_12_1 SELEX + 100024981 100024992 7.0E-06 TGAAATCTGTCA 12 TGIF1_MEIS_DBD_dimeric_12_1 SELEX - 100024981 100024992 5.0E-06 TGACAGATTTCA 12 RREB1_MA0073.1 JASPAR - 100025681 100025700 6.0E-06 CACCAACCCAGCCACCCCGC 20 V_MEIS1BHOXA9_02_M00421 TRANSFAC - 100026169 100026182 2.0E-06 TGACAGCTAAATAG 14 V_MEIS1_02_M01419 TRANSFAC + 100026171 100026186 0.0E+00 ATTTAGCTGTCATTAA 16 V_TEL1_02_M02070 TRANSFAC + 100025485 100025494 5.0E-06 CCCGGAAGTG 10 V_STAT3_01_M00225 TRANSFAC + 100025655 100025675 1.0E-05 GCTGGGTTCCGGGAAGCGAGG 21 V_PREP1_01_M01459 TRANSFAC + 100026171 100026186 3.0E-06 ATTTAGCTGTCATTAA 16 V_E2F1_Q3_01_M00938 TRANSFAC + 100025492 100025507 9.0E-06 GTGGCGCGGTACAGGA 16 V_ZFP410_04_M02936 TRANSFAC + 100024800 100024816 1.0E-06 TTCCCCCGCCCCTCATC 17 V_STAT3STAT3_Q3_M01220 TRANSFAC - 100024767 100024780 3.0E-06 TTGCGGGGAACCAT 14 V_FOXO4_02_M00476 TRANSFAC - 100025082 100025095 8.0E-06 TGGTTGTTTTTCTT 14 V_NERF_01_M01976 TRANSFAC + 100025485 100025494 9.0E-06 CCCGGAAGTG 10 V_HOXA13_02_M01297 TRANSFAC + 100024960 100024968 3.0E-06 AAATAAACC 9 V_HOXD1_01_M01448 TRANSFAC + 100026165 100026181 1.0E-05 TAAGCTATTTAGCTGTC 17 V_EAR2_Q2_M01728 TRANSFAC + 100024783 100024796 1.0E-05 TTCTCTTTGACCAT 14 V_AREB6_04_M00415 TRANSFAC + 100025866 100025874 8.0E-06 CTGTTTCTA 9 V_SP1_02_M01303 TRANSFAC - 100025288 100025298 5.0E-06 GGGGTGGGGGG 11 V_TCFAP2E_04_M02926 TRANSFAC - 100025100 100025113 8.0E-06 GCCCTGAAAAAATA 14 V_HOXA13_03_M01430 TRANSFAC - 100026040 100026055 2.0E-06 ATAGCTCATTAAAATT 16 V_HOXC13_01_M01317 TRANSFAC - 100026040 100026055 0.0E+00 ATAGCTCATTAAAATT 16 V_BARBIE_01_M00238 TRANSFAC + 100026138 100026152 8.0E-06 AGTTAAAGTTGGATG 15 V_TGIF2_01_M01407 TRANSFAC + 100026171 100026186 0.0E+00 ATTTAGCTGTCATTAA 16 V_WT1_Q6_01_M02036 TRANSFAC - 100025519 100025528 4.0E-06 CGCCCCCGCC 10 V_ELF2_02_M02054 TRANSFAC + 100025485 100025494 8.0E-06 CCCGGAAGTG 10 V_MEIS2_01_M01488 TRANSFAC + 100026171 100026186 0.0E+00 ATTTAGCTGTCATTAA 16 V_MYF_01_M01302 TRANSFAC - 100022139 100022150 1.0E-06 AAACAACTGCTG 12 V_TGIF_02_M01346 TRANSFAC - 100026171 100026187 1.0E-06 GTTAATGACAGCTAAAT 17 V_HNF1_Q6_M00790 TRANSFAC + 100022128 100022145 1.0E-06 ATGTTACTTATCAGCAGT 18 V_SPDEF_03_M02811 TRANSFAC + 100025252 100025267 7.0E-06 CCACTTCCGGATCTCG 16 V_STAT1_01_M00224 TRANSFAC + 100025655 100025675 2.0E-06 GCTGGGTTCCGGGAAGCGAGG 21 V_KROX_Q6_M00982 TRANSFAC - 100025517 100025530 6.0E-06 CCCGCCCCCGCCGG 14 V_EGR1_Q6_M01873 TRANSFAC + 100025520 100025529 4.0E-06 GCGGGGGCGG 10 V_HNF1_Q6_01_M01011 TRANSFAC - 100022126 100022146 1.0E-05 AACTGCTGATAAGTAACATCC 21 V_GADP_01_M01258 TRANSFAC + 100025253 100025264 4.0E-06 CACTTCCGGATC 12 V_GADP_01_M01258 TRANSFAC - 100025483 100025494 3.0E-06 CACTTCCGGGTG 12 V_SOX12_04_M02900 TRANSFAC - 100024840 100024855 3.0E-06 ACTTTCACAAAGCAAT 16 V_MEF2_04_M00233 TRANSFAC - 100025454 100025475 5.0E-06 CTTGGTGCTCAAAACAAACTGT 22 V_SPIB_01_M01204 TRANSFAC - 100025049 100025065 7.0E-06 GGGAAGAGGAACTTGGT 17 V_TEL1_01_M01993 TRANSFAC + 100025485 100025494 5.0E-06 CCCGGAAGTG 10 V_TGIF1_01_M03111 TRANSFAC - 100026171 100026187 1.0E-06 GTTAATGACAGCTAAAT 17 V_STAT3_03_M01595 TRANSFAC + 100025659 100025674 1.0E-06 GGTTCCGGGAAGCGAG 16 V_NKX63_01_M01470 TRANSFAC + 100026039 100026055 9.0E-06 CAATTTTAATGAGCTAT 17 V_ELF4_01_M01979 TRANSFAC + 100025485 100025494 4.0E-06 CCCGGAAGTG 10 V_FOXO1_Q5_M01216 TRANSFAC + 100025085 100025093 5.0E-06 AAAAACAAC 9 V_FOXO1_Q5_M01216 TRANSFAC - 100025458 100025466 8.0E-06 CAAAACAAA 9 V_BCL6B_04_M02844 TRANSFAC + 100024801 100024816 3.0E-06 TCCCCCGCCCCTCATC 16 V_CIZ_01_M00734 TRANSFAC - 100025100 100025108 3.0E-06 GAAAAAATA 9 V_POU6F1_02_M01462 TRANSFAC + 100026040 100026056 3.0E-06 AATTTTAATGAGCTATG 17 V_EHF_06_M02745 TRANSFAC + 100025481 100025495 8.0E-06 CACACCCGGAAGTGG 15 V_MRG2_01_M01395 TRANSFAC + 100026171 100026186 0.0E+00 ATTTAGCTGTCATTAA 16 V_PKNOX2_01_M01411 TRANSFAC + 100026171 100026186 7.0E-06 ATTTAGCTGTCATTAA 16 V_IPF1_05_M01255 TRANSFAC - 100026041 100026052 0.0E+00 GCTCATTAAAAT 12 V_XBP1_01_M00251 TRANSFAC - 100024742 100024758 6.0E-06 AGTCTGACGTGGGATTT 17 V_TFIIA_Q6_M00707 TRANSFAC + 100025871 100025882 9.0E-06 TCTAAGAGGAGG 12 V_FOXO3_01_M00477 TRANSFAC - 100025082 100025095 9.0E-06 TGGTTGTTTTTCTT 14 V_VDR_Q6_M00961 TRANSFAC + 100025036 100025047 9.0E-06 CCCAGTGAACCC 12 V_STAT_01_M00223 TRANSFAC - 100025661 100025669 7.0E-06 TTCCCGGAA 9 V_ZFP281_01_M01597 TRANSFAC - 100025290 100025300 5.0E-06 AGGGGGTGGGG 11 V_CHX10_01_M00437 TRANSFAC - 100026165 100026178 8.0E-06 AGCTAAATAGCTTA 14 V_HSF2_02_M01244 TRANSFAC + 100024850 100024862 9.0E-06 GAAAGTACCAGAA 13 V_POU6F1_03_M01479 TRANSFAC + 100026040 100026056 3.0E-06 AATTTTAATGAGCTATG 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 100025781 100025798 3.0E-06 CGAAGTGAGGGAGGAAGA 18 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 100025127 100025134 1.0E-05 TGTGGTTT 8 V_HNF3B_Q6_M02014 TRANSFAC - 100024957 100024965 1.0E-05 TTATTTGCT 9 V_ELF_02_M02053 TRANSFAC + 100025485 100025494 1.0E-05 CCCGGAAGTG 10 V_SP1_Q2_01_M00933 TRANSFAC + 100024803 100024812 7.0E-06 CCCCGCCCCT 10 V_FOXO4_01_M00472 TRANSFAC + 100025085 100025095 8.0E-06 AAAAACAACCA 11 V_UF1H3BETA_Q6_M01068 TRANSFAC - 100024796 100024809 0.0E+00 GGCGGGGGAAGGGA 14 V_HOXD10_01_M01375 TRANSFAC - 100026037 100026053 6.0E-06 AGCTCATTAAAATTGGA 17 V_STAT1_Q6_M01823 TRANSFAC + 100025661 100025670 8.0E-06 TTCCGGGAAG 10 V_SPIB_03_M02076 TRANSFAC + 100025822 100025831 7.0E-06 TGAGGAAGTC 10 V_HOXC9_01_M01416 TRANSFAC - 100026040 100026055 4.0E-06 ATAGCTCATTAAAATT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.