Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

RUNDC3B


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
154661 RUN domain containing 3B chr7 +87252728 - 87258228 87257728

Transcription Factor Binding Sites

 
Download all TFBS in the RUNDC3B promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
SOX10_HMG_full_dimeric_14_1 SELEX + 87258526 87258539 4.0E-06 TGAATGTGCAATCT 14
SOX8_HMG_DBD_dimeric_14_1 SELEX + 87258526 87258539 4.0E-06 TGAATGTGCAATCT 14
Klf4_MA0039.2 JASPAR + 87257680 87257689 1.0E-05 AGGGTGGGGC 10
BCL6B_C2H2_DBD_monomeric_17_1 SELEX + 87257364 87257380 6.0E-06 TGCTTTCTAGGCAGGCA 17
ZNF410_C2H2_DBD_monomeric_17_1 SELEX + 87257474 87257490 6.0E-06 CGCATCCCACAATCCCC 17
RREB1_MA0073.1 JASPAR - 87257749 87257768 3.0E-06 CGCCCAACCACCCACACTCC 20
V_FOXP1_01_M00987 TRANSFAC - 87254167 87254186 2.0E-06 TTGTTTTGTTTTGCATGTAT 20
V_FOXP1_01_M00987 TRANSFAC - 87254171 87254190 2.0E-06 TGTTTTGTTTTGTTTTGCAT 20
V_BCL6_01_M01183 TRANSFAC - 87254120 87254135 9.0E-06 TATTTGATAAGGCTTT 16
V_SP1_Q6_01_M00931 TRANSFAC + 87257572 87257581 4.0E-06 GGGGCGGGGC 10
V_SP1_Q6_01_M00931 TRANSFAC - 87257616 87257625 4.0E-06 GGGGCGGGGC 10
V_SP1_Q6_01_M00931 TRANSFAC + 87258499 87258508 4.0E-06 GGGGCGGGGC 10
V_HNF4_Q6_M00967 TRANSFAC - 87258450 87258458 1.0E-05 AAAGTCCAG 9
V_GM497_04_M02864 TRANSFAC - 87257897 87257912 4.0E-06 ACACACACACACGCAC 16
V_HES1_Q6_M02011 TRANSFAC + 87258104 87258113 4.0E-06 GGCACGAGAC 10
V_ELF4_04_M02850 TRANSFAC - 87258514 87258530 6.0E-06 ATTCAAAACAAATCCTC 17
V_ZNF219_01_M01122 TRANSFAC - 87258084 87258095 5.0E-06 CGCCCCCCACAC 12
V_GC_01_M00255 TRANSFAC + 87257570 87257583 3.0E-06 TCGGGGCGGGGCTT 14
V_GC_01_M00255 TRANSFAC - 87257614 87257627 4.0E-06 GAGGGGCGGGGCCG 14
V_GC_01_M00255 TRANSFAC + 87257678 87257691 6.0E-06 AGAGGGTGGGGCTG 14
V_GC_01_M00255 TRANSFAC + 87258497 87258510 2.0E-06 TTGGGGCGGGGCTG 14
V_SP1_Q6_M00196 TRANSFAC + 87257570 87257582 8.0E-06 TCGGGGCGGGGCT 13
V_SP1_Q6_M00196 TRANSFAC - 87257615 87257627 1.0E-06 GAGGGGCGGGGCC 13
V_MUSCLE_INI_B_M00321 TRANSFAC - 87257743 87257763 2.0E-06 AACCACCCACACTCCGCAGCC 21
V_KLF7_03_M02773 TRANSFAC + 87257613 87257628 6.0E-06 CCGGCCCCGCCCCTCT 16
V_GLI3_Q5_01_M01657 TRANSFAC + 87257754 87257762 6.0E-06 GTGGGTGGT 9
V_FOXO1_Q5_M01216 TRANSFAC - 87258519 87258527 8.0E-06 CAAAACAAA 9
V_SP4_Q5_M01273 TRANSFAC - 87257571 87257581 2.0E-06 GCCCCGCCCCG 11
V_SP4_Q5_M01273 TRANSFAC + 87257616 87257626 8.0E-06 GCCCCGCCCCT 11
V_MAZR_01_M00491 TRANSFAC + 87257437 87257449 4.0E-06 AAGGGGGGGGCAA 13
V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 87257679 87257687 8.0E-06 GAGGGTGGG 9
V_FOXL1_02_M02857 TRANSFAC + 87254170 87254185 1.0E-06 CATGCAAAACAAAACA 16
V_FOXL1_02_M02857 TRANSFAC - 87258516 87258531 3.0E-06 CATTCAAAACAAATCC 16
V_FPM315_01_M01587 TRANSFAC - 87257310 87257321 4.0E-06 AAGGGAGGAGGG 12
V_NRF1_Q6_M00652 TRANSFAC - 87257690 87257699 6.0E-06 CGCGTGCGCA 10
V_IPF1_Q4_01_M01013 TRANSFAC - 87254150 87254164 9.0E-06 AGTGTCATTACACTG 15
V_SP1_Q2_01_M00933 TRANSFAC + 87257617 87257626 7.0E-06 CCCCGCCCCT 10
V_GATA5_03_M02756 TRANSFAC - 87254120 87254136 2.0E-06 TTATTTGATAAGGCTTT 17
V_SP1_Q4_01_M00932 TRANSFAC - 87257615 87257627 2.0E-06 GAGGGGCGGGGCC 13
V_NANOG_02_M01247 TRANSFAC + 87254170 87254189 2.0E-06 CATGCAAAACAAAACAAAAC 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL